More than 300 homologs were found in PanDaTox collection
for query gene CPS_4372 on replicon NC_003910
Organism: Colwellia psychrerythraea 34H



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_003910  CPS_4372  methyl-accepting chemotaxis protein  100 
 
 
619 aa  1244    Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_3169  methyl-accepting chemotaxis sensory transducer  45.59 
 
 
620 aa  486  1e-136  Shewanella pealeana ATCC 700345  Bacteria  normal  0.225635  n/a   
 
 
-
 
NC_008700  Sama_2609  putative methyl-accepting chemotaxis sensory transducer  44.44 
 
 
621 aa  479  1e-134  Shewanella amazonensis SB2B  Bacteria  normal  0.206567  normal 
 
 
-
 
NC_009831  Ssed_3502  methyl-accepting chemotaxis sensory transducer  44.77 
 
 
620 aa  474  1e-132  Shewanella sediminis HAW-EB3  Bacteria  normal  0.666992  normal  0.2901 
 
 
-
 
NC_010506  Swoo_3725  methyl-accepting chemotaxis sensory transducer  44.53 
 
 
620 aa  473  1e-132  Shewanella woodyi ATCC 51908  Bacteria  normal  0.403145  normal 
 
 
-
 
NC_009092  Shew_2954  methyl-accepting chemotaxis sensory transducer  44.35 
 
 
620 aa  472  1e-132  Shewanella loihica PV-4  Bacteria  decreased coverage  0.000679912  normal 
 
 
-
 
NC_007954  Sden_1091  chemotaxis sensory transducer  42.93 
 
 
620 aa  457  1e-127  Shewanella denitrificans OS217  Bacteria  normal  0.0174472  n/a   
 
 
-
 
NC_008345  Sfri_0847  methyl-accepting chemotaxis sensory transducer  44.44 
 
 
620 aa  452  1.0000000000000001e-126  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.566037  n/a   
 
 
-
 
NC_011663  Sbal223_3551  methyl-accepting chemotaxis sensory transducer  45.35 
 
 
620 aa  445  1e-123  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.00183884 
 
 
-
 
NC_009997  Sbal195_3742  methyl-accepting chemotaxis sensory transducer  44.78 
 
 
620 aa  443  1e-123  Shewanella baltica OS195  Bacteria  normal  normal  0.35347 
 
 
-
 
NC_009052  Sbal_0691  methyl-accepting chemotaxis sensory transducer  45.35 
 
 
620 aa  445  1e-123  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_3619  methyl-accepting chemotaxis sensory transducer  44.78 
 
 
620 aa  444  1e-123  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_3838  methyl-accepting chemotaxis protein  44.35 
 
 
620 aa  426  1e-118  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008577  Shewana3_0764  methyl-accepting chemotaxis sensory transducer  45.3 
 
 
620 aa  425  1e-117  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_3174  methyl-accepting chemotaxis sensory transducer  45.17 
 
 
620 aa  421  1e-116  Shewanella sp. MR-4  Bacteria  normal  0.733563  normal  0.773778 
 
 
-
 
NC_008322  Shewmr7_0792  methyl-accepting chemotaxis sensory transducer  44.82 
 
 
620 aa  419  1e-116  Shewanella sp. MR-7  Bacteria  normal  0.912748  normal  0.850506 
 
 
-
 
NC_009438  Sputcn32_0796  methyl-accepting chemotaxis sensory transducer  44.89 
 
 
620 aa  415  1e-114  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0685  methyl-accepting chemotaxis sensory transducer  38.97 
 
 
620 aa  393  1e-108  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  38.65 
 
 
564 aa  245  1.9999999999999999e-63  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_0808  methyl-accepting chemotaxis sensory transducer  35.37 
 
 
541 aa  239  9e-62  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_3705  methyl-accepting chemotaxis sensory transducer  40.77 
 
 
541 aa  239  9e-62  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0963791  normal 
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  41.23 
 
 
637 aa  236  7e-61  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  35.35 
 
 
713 aa  229  9e-59  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_008789  Hhal_0167  methyl-accepting chemotaxis sensory transducer  39.33 
 
 
540 aa  229  2e-58  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_4463  methyl-accepting chemotaxis sensory transducer  41.44 
 
 
552 aa  228  3e-58  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.43301 
 
 
-
 
NC_011901  Tgr7_1324  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  41.57 
 
 
523 aa  226  1e-57  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.587106  n/a   
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  41.33 
 
 
712 aa  225  1e-57  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_011901  Tgr7_1674  methyl-accepting chemotaxis sensory transducer  41.85 
 
 
543 aa  226  1e-57  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  40.11 
 
 
712 aa  225  2e-57  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  40.77 
 
 
716 aa  224  4.9999999999999996e-57  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  43.92 
 
 
637 aa  223  9e-57  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_009654  Mmwyl1_0219  methyl-accepting chemotaxis sensory transducer  40.56 
 
 
773 aa  222  9.999999999999999e-57  Marinomonas sp. MWYL1  Bacteria  normal  0.952357  normal 
 
 
-
 
NC_009439  Pmen_3139  methyl-accepting chemotaxis sensory transducer  40.82 
 
 
640 aa  222  1.9999999999999999e-56  Pseudomonas mendocina ymp  Bacteria  normal  0.753261  normal  0.0120166 
 
 
-
 
NC_013457  VEA_000971  methyl-accepting chemotaxis protein  39.15 
 
 
553 aa  222  1.9999999999999999e-56  Vibrio sp. Ex25  Bacteria  normal  0.370017  n/a   
 
 
-
 
NC_013457  VEA_000502  methyl-accepting chemotaxis protein  31.1 
 
 
589 aa  221  3e-56  Vibrio sp. Ex25  Bacteria  normal  0.567249  n/a   
 
 
-
 
NC_004578  PSPTO_2616  methyl-accepting chemotaxis protein  40 
 
 
633 aa  220  6e-56  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  decreased coverage  0.00438795  n/a   
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  44.28 
 
 
636 aa  219  7.999999999999999e-56  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_009456  VC0395_0606  methyl-accepting chemotaxis protein  31.18 
 
 
587 aa  219  7.999999999999999e-56  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_1254  methyl-accepting chemotaxis sensory transducer  33.81 
 
 
639 aa  219  8.999999999999998e-56  Pseudomonas putida W619  Bacteria  normal  0.523103  normal  0.0331864 
 
 
-
 
NC_011901  Tgr7_1672  methyl-accepting chemotaxis sensory transducer  38.79 
 
 
544 aa  219  1e-55  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  39.12 
 
 
638 aa  219  1e-55  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_008740  Maqu_3284  methyl-accepting chemotaxis sensory transducer  39.28 
 
 
522 aa  217  4e-55  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  38.9 
 
 
541 aa  217  5e-55  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  38.25 
 
 
541 aa  217  5.9999999999999996e-55  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_3379  methyl-accepting chemotaxis protein  38.75 
 
 
559 aa  217  7e-55  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_4196  methyl-accepting chemotaxis sensory transducer  41.92 
 
 
552 aa  216  9e-55  Shewanella pealeana ATCC 700345  Bacteria  normal  0.14959  n/a   
 
 
-
 
NC_009438  Sputcn32_0619  methyl-accepting chemotaxis sensory transducer  41.28 
 
 
634 aa  216  9.999999999999999e-55  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_0157  methyl-accepting chemotaxis sensory transducer  43.69 
 
 
646 aa  216  9.999999999999999e-55  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.805637  n/a   
 
 
-
 
NC_007954  Sden_0712  chemotaxis sensory transducer  38.74 
 
 
541 aa  216  9.999999999999999e-55  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.0000566108  n/a   
 
 
-
 
NC_009092  Shew_1929  methyl-accepting chemotaxis sensory transducer  30.77 
 
 
662 aa  215  1.9999999999999998e-54  Shewanella loihica PV-4  Bacteria  normal  0.23754  normal  0.0188929 
 
 
-
 
NC_008577  Shewana3_3611  methyl-accepting chemotaxis sensory transducer  39.57 
 
 
634 aa  215  1.9999999999999998e-54  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009456  VC0395_0173  methyl-accepting chemotaxis protein  39.02 
 
 
639 aa  215  1.9999999999999998e-54  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_0861  methyl-accepting chemotaxis sensory transducer  38 
 
 
542 aa  214  3.9999999999999995e-54  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A1249  methyl-accepting chemotaxis protein  38.46 
 
 
596 aa  213  5.999999999999999e-54  Vibrio cholerae O395  Bacteria  hitchhiker  0.000483868  n/a   
 
 
-
 
NC_009784  VIBHAR_07022  histidine kinase  40.23 
 
 
553 aa  213  5.999999999999999e-54  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009784  VIBHAR_05387  histidine kinase  29.23 
 
 
589 aa  213  7e-54  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007005  Psyr_0905  histidine kinase, HAMP region: chemotaxis sensory transducer  40.87 
 
 
640 aa  213  1e-53  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.746842  normal 
 
 
-
 
NC_010506  Swoo_0732  methyl-accepting chemotaxis sensory transducer  34.37 
 
 
555 aa  213  1e-53  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.177926 
 
 
-
 
NC_004578  PSPTO_3577  methyl-accepting chemotaxis protein  34.98 
 
 
542 aa  211  2e-53  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0380  histidine kinase, HAMP region: chemotaxis sensory transducer  40.8 
 
 
638 aa  211  3e-53  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_2310  methyl-accepting chemotaxis sensory transducer  37.87 
 
 
492 aa  211  4e-53  Pseudomonas putida KT2440  Bacteria  normal  0.178377  decreased coverage  0.00000773933 
 
 
-
 
NC_004347  SO_4053  methyl-accepting chemotaxis protein  39.41 
 
 
634 aa  211  4e-53  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007005  Psyr_2356  histidine kinase, HAMP region: chemotaxis sensory transducer  39.77 
 
 
619 aa  211  4e-53  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0809243  normal  0.398562 
 
 
-
 
NC_011901  Tgr7_0712  putative methyl-accepting chemotaxis sensory transducer  45.13 
 
 
624 aa  210  6e-53  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_3459  methyl-accepting chemotaxis sensory transducer  37.87 
 
 
492 aa  210  7e-53  Pseudomonas putida F1  Bacteria  normal  hitchhiker  0.000433284 
 
 
-
 
NC_009092  Shew_0876  methyl-accepting chemotaxis sensory transducer  32.64 
 
 
674 aa  209  8e-53  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_0851  methyl-accepting chemotaxis sensory transducer  41.23 
 
 
674 aa  209  9e-53  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.244273  n/a   
 
 
-
 
NC_007912  Sde_2316  putative methyl-accepting chemotaxis sensory transducer  40.17 
 
 
548 aa  209  9e-53  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0208981 
 
 
-
 
NC_009439  Pmen_2444  methyl-accepting chemotaxis sensory transducer  43.61 
 
 
489 aa  209  1e-52  Pseudomonas mendocina ymp  Bacteria  decreased coverage  0.00221824  normal 
 
 
-
 
NC_009438  Sputcn32_0323  methyl-accepting chemotaxis sensory transducer  42.26 
 
 
623 aa  209  1e-52  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2000  methyl-accepting chemotaxis sensory transducer  39.6 
 
 
560 aa  209  1e-52  Pseudomonas mendocina ymp  Bacteria  normal  0.0144557  normal  0.0324669 
 
 
-
 
NC_009052  Sbal_0194  methyl-accepting chemotaxis sensory transducer  40.74 
 
 
623 aa  209  2e-52  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0379  histidine kinase, HAMP region: chemotaxis sensory transducer  41.19 
 
 
647 aa  209  2e-52  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.454626  normal 
 
 
-
 
NC_009439  Pmen_1701  methyl-accepting chemotaxis sensory transducer  40.66 
 
 
650 aa  208  2e-52  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.076135 
 
 
-
 
NC_007492  Pfl01_0657  chemotaxis sensory transducer, Cache sensor  40.51 
 
 
648 aa  208  2e-52  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.511779  normal 
 
 
-
 
NC_009831  Ssed_3856  methyl-accepting chemotaxis sensory transducer  38.5 
 
 
640 aa  208  3e-52  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.825575 
 
 
-
 
NC_011901  Tgr7_0580  putative methyl-accepting chemotaxis sensory transducer  44.19 
 
 
679 aa  207  4e-52  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_2952  methyl-accepting chemotaxis sensory transducer  37.08 
 
 
541 aa  207  4e-52  Shewanella loihica PV-4  Bacteria  hitchhiker  0.000751538  normal 
 
 
-
 
NC_011663  Sbal223_0194  methyl-accepting chemotaxis sensory transducer with Cache sensor  41.96 
 
 
623 aa  207  5e-52  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_4274  methyl-accepting chemotaxis sensory transducer with Cache sensor  41.96 
 
 
623 aa  207  5e-52  Shewanella baltica OS195  Bacteria  normal  normal  0.179842 
 
 
-
 
NC_004578  PSPTO_5160  methyl-accepting chemotaxis protein  40.3 
 
 
647 aa  207  5e-52  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.391343  n/a   
 
 
-
 
NC_009665  Shew185_4141  methyl-accepting chemotaxis sensory transducer  41.96 
 
 
623 aa  207  5e-52  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_0193  methyl-accepting chemotaxis sensory transducer  41.96 
 
 
623 aa  207  5e-52  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_3582  methyl-accepting chemotaxis protein  35.5 
 
 
541 aa  207  6e-52  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009092  Shew_0596  methyl-accepting chemotaxis sensory transducer  38.69 
 
 
640 aa  207  6e-52  Shewanella loihica PV-4  Bacteria  normal  normal  0.270432 
 
 
-
 
NC_007005  Psyr_2220  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  40.18 
 
 
646 aa  207  6e-52  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.071358  normal  0.520396 
 
 
-
 
NC_008700  Sama_2607  putative methyl-accepting chemotaxis sensory transducer  36.57 
 
 
541 aa  207  6e-52  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.00122932  normal 
 
 
-
 
NC_009438  Sputcn32_1020  methyl-accepting chemotaxis sensory transducer  36.67 
 
 
541 aa  206  7e-52  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.00762848  n/a   
 
 
-
 
NC_004578  PSPTO_1059  methyl-accepting chemotaxis protein  40 
 
 
629 aa  206  1e-51  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_0252  methyl-accepting chemotaxis sensory transducer with Cache sensor  38.17 
 
 
623 aa  206  1e-51  Shewanella woodyi ATCC 51908  Bacteria  normal  0.866394  normal 
 
 
-
 
NC_007492  Pfl01_1418  chemotaxis sensory transducer  41.35 
 
 
541 aa  206  1e-51  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007520  Tcr_1999  methyl-accepting chemotaxis sensory transducer  36.83 
 
 
405 aa  206  1e-51  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_1752  methyl-accepting chemotaxis sensory transducer  37.37 
 
 
492 aa  206  1e-51  Pseudomonas putida W619  Bacteria  normal  hitchhiker  0.000000224536 
 
 
-
 
NC_008577  Shewana3_3173  methyl-accepting chemotaxis sensory transducer  39.39 
 
 
541 aa  206  1e-51  Shewanella sp. ANA-3  Bacteria  normal  0.0131988  normal 
 
 
-
 
NC_010322  PputGB1_1912  methyl-accepting chemotaxis sensory transducer  38.69 
 
 
492 aa  205  2e-51  Pseudomonas putida GB-1  Bacteria  normal  0.407863  hitchhiker  0.000000143908 
 
 
-
 
NC_009457  VC0395_A2596  methyl-accepting chemotaxis protein  35.25 
 
 
564 aa  205  2e-51  Vibrio cholerae O395  Bacteria  unclonable  0.00000000000057467  n/a   
 
 
-
 
NC_009656  PSPA7_4141  chemotaxis transducer  39.58 
 
 
541 aa  205  2e-51  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_1426  methyl-accepting chemotaxis sensory transducer  38.19 
 
 
634 aa  205  2e-51  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_04784  histidine kinase  40.84 
 
 
628 aa  204  3e-51  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009512  Pput_2217  methyl-accepting chemotaxis sensory transducer  40.17 
 
 
714 aa  204  3e-51  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
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