Gene CPS_4372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_4372 
Symbol 
ID3522864 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp4603331 
End bp4605190 
Gene Length1860 bp 
Protein Length619 aa 
Translation table11 
GC content37% 
IMG OID637286813 
Productmethyl-accepting chemotaxis protein 
Protein accessionYP_271021 
Protein GI71282390 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTATTA AGAACAAATT AATCGCTAAT ACTGCAATTT TAGTACTGGC TATGATCCTA 
ATGTTAATGT TGCTGAACTA TGAAAGTTCG GCATTACAAC ATGATATAAA TATTGCAAAA
AGTATAGGTA ATATTAAAGC GTCAGTACTT GAACTAAGAC ACGAAGAAAA AGACTTCTCT
GCTCATAAAA AGTTAACAAA TTCAGACCAA TTTAATAAAC AAATGAAAAA CGTTCAGCAT
CAAATTAATG CGTTGTCAGA TGACTTTGCA GAGGTTGGTC TTTCTATGCC GGAATTGACA
AGTATGGGGA ATATTCTTGT TCAATATCAA GATCAATTTA CGCATCTTGT CGGGTTACAA
AAGAAAATTG GCCTAGATGC TAAATCAGGT TTATATGGAG AACTTCGGGG TGCGGTTCAT
AGCGTTGAGA CGCTTATTGG CAAAGACAAT TATCGTCTAC GTAGTGAAAT GTTGCAGCTT
AGACGAAACG AAAAAGATTT TATGTTACGT CTTGATGAAA AATATGTTGA TAAACTTAAT
AAAAATGTTA ACAAGTTACT GACCTCAGTC CAAGCAAGTA ACTTCACCTT CGCTAAAAAG
CAGGAAGTGA ATAAGCTAAT CAAAGCCTAT CAAAATTCTT TCTCAAATCT AGTCATATCC
CAAAAAGAGC TCGGTTATAA TGAGAAGATG GGCAGCAGAA ATAAAATGCG TCATGTAGTT
AATCAAGTTG ATAATGAATT GAAAAAGCTA CTGTCTCATA GTGAATCTGC GGTGAAAGAA
GATGTGAATT TTATTAATAC ATTGGCCTAT AGCCTTTTTT CGGTTGTGCT CGTAGTTGCT
TTAGTAAGTG CTTGGTTAAT CGGAAAAAGT ATTTTGAATC GAATTAGCAA TCTACAAAGT
AGTATGAATA GTATCGCTCA GAGTAATGAT TTAACTATTG CAGTCGATGT TAGTGGTGGA
GATGAACTAT CGGATATGGC GACAGTGTTT AACCATATGT TAACTAACTT TAGATCACTT
ATTGTAGAAG TAAATCATTC AGTTAATACT CTCAATACCG CTACAGGCAG CTTGGCTGAA
AATATTTACA ATGCTAATGA GGGTGTAGAA ACTCAGATGC AGCAAACGGA TCTTGTAGCA
ACTGCAGTAA CAGAAATGGT GGCAACAGTA GATGAAATTG CGACTAATAC GCGAGAAGCA
GCCCATAAAG CTGAAGTAAC GAATAGTAAT GCAGGTAAAG GTAAAGCAGG GGTGGAACAG
ACCATCAACC AAATAGGCCA ATTATCAGAA AAGCTATTGG ATTCAGAAAA CGTCGTTAAA
GAATTGGAAA AAGAAAGTGT CACTATTGCT TCAGTATTAG GTGTTATTCG TGGCATTGCC
GAACAAACAA ATTTATTGGC GTTAAATGCA GCAATTGAAG CAGCAAGAGC TGGAGAGCAA
GGTCGCGGTT TTGCTGTAGT TGCTGATGAA GTGAGAACAC TTGCCAGTAG AACTCAAGAC
TCAACGCAAG AGATAGAAAC AATTATTGGC TTATTGCAAA AACGTACTCA AGAGATAGTC
ACTCTAATGG CGGAATGTCG TAATCAGGGG AAAGAGAGTG CTGAGCAAGC AAGTTCTGCC
GGAGCAATGC TTGATGAGAT AACACAAGAT GTTGCTTTGA TTATGGATAT GAATAGTGCC
ATTGCTACGG CGATTCAAGA GCAAAGTACT GTTGCATCGG AAGTTAACCA ACATGTAGTG
ATGATCAGAG ATGTGACAGA GCAATCGGGT GATTCTGCGA AACAAAATGA GCAAATGAGT
GAAGAGTTGT CTCAACAGGC CCAAGTGCTA ACTACAGAGG TTAGTCGCTT TACTGTATAA
 
Protein sequence
MLIKNKLIAN TAILVLAMIL MLMLLNYESS ALQHDINIAK SIGNIKASVL ELRHEEKDFS 
AHKKLTNSDQ FNKQMKNVQH QINALSDDFA EVGLSMPELT SMGNILVQYQ DQFTHLVGLQ
KKIGLDAKSG LYGELRGAVH SVETLIGKDN YRLRSEMLQL RRNEKDFMLR LDEKYVDKLN
KNVNKLLTSV QASNFTFAKK QEVNKLIKAY QNSFSNLVIS QKELGYNEKM GSRNKMRHVV
NQVDNELKKL LSHSESAVKE DVNFINTLAY SLFSVVLVVA LVSAWLIGKS ILNRISNLQS
SMNSIAQSND LTIAVDVSGG DELSDMATVF NHMLTNFRSL IVEVNHSVNT LNTATGSLAE
NIYNANEGVE TQMQQTDLVA TAVTEMVATV DEIATNTREA AHKAEVTNSN AGKGKAGVEQ
TINQIGQLSE KLLDSENVVK ELEKESVTIA SVLGVIRGIA EQTNLLALNA AIEAARAGEQ
GRGFAVVADE VRTLASRTQD STQEIETIIG LLQKRTQEIV TLMAECRNQG KESAEQASSA
GAMLDEITQD VALIMDMNSA IATAIQEQST VASEVNQHVV MIRDVTEQSG DSAKQNEQMS
EELSQQAQVL TTEVSRFTV