Gene Pfl01_1418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1418 
Symbol 
ID3717174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1588471 
End bp1590096 
Gene Length1626 bp 
Protein Length541 aa 
Translation table11 
GC content63% 
IMG OID 
Productchemotaxis sensory transducer 
Protein accessionYP_347150 
Protein GI77457645 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTATCC GGAATCTGCG CATCGGTTTG CGCGCCAGTT TGTGTTTTGC CGTTCTGGCC 
AGTCTGCTGG TGGTGGTCGG CCTGTTCGGT CTGGGCCAGA TGAAAACCCT GCGCGAGAGC
GCGGCGGTGA TCGAGGAAGC ATGGATGCCC AGCATCGAAA GCATCCATGA CACAGCGGCG
AACATCGCCA GCATCCGTCT CGAATCCCTG CGCCTGATCA CCAGCACCCA GGCTGCCGTG
CGCGAACGCA GCAAAGGCCT TCTCACGGCG CAACGCCAGG AGTTGCTCAA GCGCCTCGAC
GATCACAAAG CCCTGATCGC CAACGATCAG GAACAGGCGA TGCTGGAAGG ACTGAGCGCG
GACACCGCCA AGTACCTGAG CATCCTTGAC CAGATCATCA AACAGATCGA CGCCGGACAA
AACGATCAGG CCTACGCGCG CCTGACCAAT GAACTGGCGC CCCAGGGCAC GGTGCTCGAC
AAAACGCTGG AGCAAATGAT CACGCTCAAC CAACAAGGCG CGGATACCGC CGCCAAGTCC
GCGGCGGCGA TGTACCAGCA GGCGCTGTGG ATCGTCGCGA TGATCATCGT CATTGCGCTG
ATTGCCACGT TGCTGCTGGC CTGGTTGCTG ACCCGCAGCA TCACCGCGCC GATCAATCAG
GCGCTGAACG TGGCACGACG GATTGCTTCG GGAGACCTCA GCGGTCGCAT CGACAGCAAC
GGCAAGGATG AAGCGGCGCA GTTGCTGATC GCTCTGGCCG AGATGCAGAG CAATCTGCGC
TCGACCATTC GCGGCATCAG CGAGTCGGCC CAGCAACTGG CCTCCGCCGC CGAGGAAATG
AGTTCGGTGA TGGAACAGAG CACCCGCGGC CTGCAACAGC AGAATGACCA GATCGAACAG
GCTGCCACGG CGGTCACCGA GATGAGCACG GCGGTCGATG AGGTGGCCGC CAATGCGGTG
TCCAGTGCCG AAGCCTCCGA AGCCTCGAAC GAGGACAGCA AGCACGGGCA TGTGCAGGTC
AGCGAGACCA TCAGTTCGAT TCAGGAATTG GTCAGCGCAG TGCTGGGTGC GTCCGAACAG
GCCGAGGGCC TGGCGACTCA GGCCCAGGAC ATCAGCAAGG TACTGGAGGT GATTCGCGGC
ATCGCCGGGC AGACCAACCT GCTGGCACTC AACGCCGCCA TTGAAGCGGC GCGGGCCGGC
GAGGCCGGAC GAGGGTTTGC GGTGGTCGCC GATGAAGTCC GCTCGCTGGC CCAGCGCACG
CAGAACTCCA CCGAAGAAAT CGAGCTGATG ATCAGCAGCA TTCAGCAAGG CACCAGCGCC
ACCGTCGGCG CTTTGCAATC CAGCGCCGAG CAGGCCAGCC ACACCCTGCG CCGGGCCAAC
AGCGCCGGCC AGGCCCTGGA GAAAATCACC GCGTCGATCT CGCAGATCAA CCAGCGCAAC
CTGGTGATCG CCAGCGCCGC CGAGCAGCAG GCGCTGGTGG CGCGGGAAGT CGATCAGAAT
CTGGTGACCA TCCGCGACCT GTCGACCCAG ACCGCTGCCG GCGCCACCCA GACGTCTGCC
GCCAGCCAGG AACTGTCGCG ACTGGCCGTA GACCTCAACG GGCTGGTGAC GCGCTTCGTG
ATCTGA
 
Protein sequence
MTIRNLRIGL RASLCFAVLA SLLVVVGLFG LGQMKTLRES AAVIEEAWMP SIESIHDTAA 
NIASIRLESL RLITSTQAAV RERSKGLLTA QRQELLKRLD DHKALIANDQ EQAMLEGLSA
DTAKYLSILD QIIKQIDAGQ NDQAYARLTN ELAPQGTVLD KTLEQMITLN QQGADTAAKS
AAAMYQQALW IVAMIIVIAL IATLLLAWLL TRSITAPINQ ALNVARRIAS GDLSGRIDSN
GKDEAAQLLI ALAEMQSNLR STIRGISESA QQLASAAEEM SSVMEQSTRG LQQQNDQIEQ
AATAVTEMST AVDEVAANAV SSAEASEASN EDSKHGHVQV SETISSIQEL VSAVLGASEQ
AEGLATQAQD ISKVLEVIRG IAGQTNLLAL NAAIEAARAG EAGRGFAVVA DEVRSLAQRT
QNSTEEIELM ISSIQQGTSA TVGALQSSAE QASHTLRRAN SAGQALEKIT ASISQINQRN
LVIASAAEQQ ALVAREVDQN LVTIRDLSTQ TAAGATQTSA ASQELSRLAV DLNGLVTRFV
I