Gene Sbal195_4274 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_4274 
Symbol 
ID5756105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp5053855 
End bp5055726 
Gene Length1872 bp 
Protein Length623 aa 
Translation table11 
GC content49% 
IMG OID641290630 
Productmethyl-accepting chemotaxis sensory transducer with Cache sensor 
Protein accessionYP_001556692 
Protein GI160877376 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.179842 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTCAT ATTCGCTCAA GCAAAAAATT CTGTTCTCCG TCGTGGTAGC CCTTTCACTC 
GTGATTGGTT TGTTGTCATG GCAAAGTTAT TCCAGCCAAA AGTCTCAGCT GTTAAAAAAC
AGCCTAGAAC AAGTGCAGCG CTTAGGTGAG CAGCAGGCTG AGCGTATTCA AGAATGGTTG
GCTGGCCGCC AAGATATTAT GGGGGCACTG GCGAGCAAAG TTGAGGGTGA TAGCCTAAAT
ACGTTACAAC AAGCACAAGC GTCTGGCCGT TTCCAGTTGA CCTATTTTGG GAGCCAAGCG
GGGCAAATGC TGGATTCTGA TCCGAGTGTA GACCGTACTG GTTATGATCC TCGTAGCCGT
CCTTGGTATC AACAAGCCAT CAGTGCACGC GGTCCTATCT TGACTAAGCC TTACGTGGAT
GTGGCTTATA ACATTCTGGT TGTGACTATG GCGCAGCCTA CGGCACAAGG TGTTGTGGGT
GGTGACTTAT CTATCGCGAG CCTAGTTGAC GGTGTTAATC GGATGAAGTT ACCGGCCAAC
GGTTATGCCA TCATGATGCA CAAAGACGGC ACGGTTATCG CTTATAAAGA TCAAGCGAAG
ACGATGAAAC CTATAGGTGA AATCGACAAC GATCTTAATC GCAACTTGCC AGAACAGAGC
CGTGCAGCGG GTACTCTGCT GCCTATGTAT TTTGAAAATG AAGGACGCGA CAAGTTAGTT
TGGAGCGTTG ATATCCCCAA TACAGATTGG GAATTAGTGT TAGTGCTTGA TAAGGAAACG
CTAGAAGCGC CACTGTCGAG CCTGTTACTT ACCCAACTGG GTTTATCGGC ACTCGTACTG
CTGTTGAGTG TGTTAGCGAT TTCTTGGTTA GTTGGCATGT TACTGGGTCC TTTGAGCCGA
GTTTCGCAGG CACTGGCGCG TATTGCCGAT GGTAATGGTG ATTTAACTCA GCGTATTTCA
GTCGACACTC AAGATGAAGT GGGCGTGCTT GCCGATAGCT TTAACCGTTT TGTTGGTAGT
CAACATCAGT TGATCAGCCA TATTCGCCAG TTAGCGAATG AGTTAGATGC CGATGCTGAG
CGTAGTCTGG CCACCACACA AACCTCGGTG ACTGAACTAC AACGTCAACA ACAGGAAGTG
GCGATGGTCG CGACCGCAGT AACAGAAATG GCGAGTGCCA CCAATGAGAT TGCGGCCAAT
GCTGAAAACA CGGCAACGGC GGCTCAACAA TCTGCCGCGA GCAGTTTACA GGGTAAAGAG
TTAGTCAATA AAACCCGTAA CTCGATTAAT TCGCTGGCCG ATGAAGTGAC TCAAGCGACC
GATGTCATTG CTGATTTGAG CCGTCACGCT CAATCAATTT CAAGCATTCT AGCGACGATT
CAAGGGATTG CAGAACAAAC CAACTTGTTG GCGCTTAACG CTGCCATTGA GGCGGCGCGT
GCTGGTGAGC AGGGTCGTGG TTTTGCCGTG GTCGCCGATG AAGTGCGCGT GTTATCGCGT
CGTACTCAAG ATTCGACTCA AGAAGTGCAT ACCACGATTG AAACACTGCA ACGCACAACC
GCCAGAGCCG TCAGCTTGAT GGAAAGCAGC CAAGCATTAG CGGGTCACAG TGTTGAAGAT
GCGAATGCGG CGGCAAAAGC CCTTGAAGAA ATAACTCAAG CGGTCAACGT GATTTCAGAT
ATGGCAGGCC AGATTGCTAC CGCAGCGGAA GAGCAGACTC AAGTGACGGG TGAAATCACC
CAAAACACCG TTGCGATTAA AGATGTGACC GATGAGATTA CCGCATCGGC CATGGCTGAT
TTGGCACAGG CGCGTGGATT AAAAGCCCGT GCTAATGATC TTAATGCACA AGTCGCGACC
TTTATTCTGT AG
 
Protein sequence
MNSYSLKQKI LFSVVVALSL VIGLLSWQSY SSQKSQLLKN SLEQVQRLGE QQAERIQEWL 
AGRQDIMGAL ASKVEGDSLN TLQQAQASGR FQLTYFGSQA GQMLDSDPSV DRTGYDPRSR
PWYQQAISAR GPILTKPYVD VAYNILVVTM AQPTAQGVVG GDLSIASLVD GVNRMKLPAN
GYAIMMHKDG TVIAYKDQAK TMKPIGEIDN DLNRNLPEQS RAAGTLLPMY FENEGRDKLV
WSVDIPNTDW ELVLVLDKET LEAPLSSLLL TQLGLSALVL LLSVLAISWL VGMLLGPLSR
VSQALARIAD GNGDLTQRIS VDTQDEVGVL ADSFNRFVGS QHQLISHIRQ LANELDADAE
RSLATTQTSV TELQRQQQEV AMVATAVTEM ASATNEIAAN AENTATAAQQ SAASSLQGKE
LVNKTRNSIN SLADEVTQAT DVIADLSRHA QSISSILATI QGIAEQTNLL ALNAAIEAAR
AGEQGRGFAV VADEVRVLSR RTQDSTQEVH TTIETLQRTT ARAVSLMESS QALAGHSVED
ANAAAKALEE ITQAVNVISD MAGQIATAAE EQTQVTGEIT QNTVAIKDVT DEITASAMAD
LAQARGLKAR ANDLNAQVAT FIL