More than 300 homologs were found in PanDaTox collection
for query gene PputW619_1752 on replicon NC_010501
Organism: Pseudomonas putida W619



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002947  PP_2310  methyl-accepting chemotaxis sensory transducer  90.04 
 
 
492 aa  855    Pseudomonas putida KT2440  Bacteria  normal  0.178377  decreased coverage  0.00000773933 
 
 
-
 
NC_010501  PputW619_1752  methyl-accepting chemotaxis sensory transducer  100 
 
 
492 aa  994    Pseudomonas putida W619  Bacteria  normal  hitchhiker  0.000000224536 
 
 
-
 
NC_004578  PSPTO_2254  methyl-accepting chemotaxis protein  71.4 
 
 
491 aa  648    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.177753  n/a   
 
 
-
 
NC_009512  Pput_3459  methyl-accepting chemotaxis sensory transducer  90.04 
 
 
492 aa  868    Pseudomonas putida F1  Bacteria  normal  hitchhiker  0.000433284 
 
 
-
 
NC_007005  Psyr_2059  histidine kinase, HAMP region: chemotaxis sensory transducer  73.83 
 
 
491 aa  674    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.116428  normal  0.539616 
 
 
-
 
NC_007492  Pfl01_4022  chemotaxis sensory transducer  81.95 
 
 
493 aa  778    Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_1912  methyl-accepting chemotaxis sensory transducer  89.63 
 
 
492 aa  860    Pseudomonas putida GB-1  Bacteria  normal  0.407863  hitchhiker  0.000000143908 
 
 
-
 
NC_008463  PA14_27000  putative chemotaxis transducer  67.55 
 
 
490 aa  571  1.0000000000000001e-162  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_2287  putative chemotaxis transducer  67.75 
 
 
490 aa  569  1e-161  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0436901  n/a   
 
 
-
 
NC_009439  Pmen_2444  methyl-accepting chemotaxis sensory transducer  62.25 
 
 
489 aa  542  1e-153  Pseudomonas mendocina ymp  Bacteria  decreased coverage  0.00221824  normal 
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  42.19 
 
 
541 aa  242  1e-62  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  40.34 
 
 
541 aa  238  2e-61  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_4463  methyl-accepting chemotaxis sensory transducer  42.51 
 
 
552 aa  237  3e-61  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.43301 
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  45.05 
 
 
637 aa  235  2.0000000000000002e-60  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  39.72 
 
 
638 aa  234  3e-60  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_011901  Tgr7_0580  putative methyl-accepting chemotaxis sensory transducer  47.27 
 
 
679 aa  233  6e-60  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_5093  histidine kinase, HAMP region: chemotaxis sensory transducer  40.11 
 
 
676 aa  233  7.000000000000001e-60  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_1674  methyl-accepting chemotaxis sensory transducer  41.93 
 
 
543 aa  230  6e-59  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_5554  methyl-accepting chemotaxis protein  41.19 
 
 
676 aa  229  9e-59  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_3139  methyl-accepting chemotaxis sensory transducer  41.14 
 
 
640 aa  229  1e-58  Pseudomonas mendocina ymp  Bacteria  normal  0.753261  normal  0.0120166 
 
 
-
 
NC_007005  Psyr_3114  histidine kinase, HAMP region: chemotaxis sensory transducer  40.46 
 
 
541 aa  228  2e-58  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.860602  normal 
 
 
-
 
NC_007954  Sden_0712  chemotaxis sensory transducer  41.09 
 
 
541 aa  228  2e-58  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.0000566108  n/a   
 
 
-
 
NC_009439  Pmen_1701  methyl-accepting chemotaxis sensory transducer  42.9 
 
 
650 aa  227  3e-58  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.076135 
 
 
-
 
NC_007492  Pfl01_0447  chemotaxis sensory transducer  42.44 
 
 
541 aa  227  4e-58  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_0851  methyl-accepting chemotaxis sensory transducer  43.15 
 
 
674 aa  226  7e-58  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.244273  n/a   
 
 
-
 
NC_009901  Spea_4196  methyl-accepting chemotaxis sensory transducer  38.98 
 
 
552 aa  226  7e-58  Shewanella pealeana ATCC 700345  Bacteria  normal  0.14959  n/a   
 
 
-
 
NC_010501  PputW619_1254  methyl-accepting chemotaxis sensory transducer  41.73 
 
 
639 aa  226  9e-58  Pseudomonas putida W619  Bacteria  normal  0.523103  normal  0.0331864 
 
 
-
 
NC_004578  PSPTO_0466  methyl-accepting chemotaxis protein  38.11 
 
 
541 aa  225  1e-57  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_3379  methyl-accepting chemotaxis protein  42.12 
 
 
559 aa  224  3e-57  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_0808  methyl-accepting chemotaxis sensory transducer  38.03 
 
 
541 aa  223  6e-57  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_4706  histidine kinase, HAMP region: chemotaxis sensory transducer  42.44 
 
 
541 aa  223  8e-57  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  44.37 
 
 
636 aa  222  9e-57  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_008740  Maqu_3269  methyl-accepting chemotaxis sensory transducer  37.25 
 
 
605 aa  220  3e-56  Marinobacter aquaeolei VT8  Bacteria  hitchhiker  0.000515244  n/a   
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  38.22 
 
 
637 aa  220  5e-56  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_010322  PputGB1_5070  methyl-accepting chemotaxis sensory transducer  41.99 
 
 
638 aa  219  8.999999999999998e-56  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_3502  methyl-accepting chemotaxis sensory transducer  38.29 
 
 
620 aa  219  1e-55  Shewanella sediminis HAW-EB3  Bacteria  normal  0.666992  normal  0.2901 
 
 
-
 
NC_009512  Pput_4894  methyl-accepting chemotaxis sensory transducer  41.99 
 
 
638 aa  219  1e-55  Pseudomonas putida F1  Bacteria  normal  0.291281  normal 
 
 
-
 
NC_007954  Sden_1091  chemotaxis sensory transducer  35.92 
 
 
620 aa  219  1e-55  Shewanella denitrificans OS217  Bacteria  normal  0.0174472  n/a   
 
 
-
 
NC_008740  Maqu_0339  methyl-accepting chemotaxis sensory transducer  41.57 
 
 
558 aa  218  2e-55  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_3348  histidine kinase, HAMP region: chemotaxis sensory transducer  41.99 
 
 
542 aa  218  2e-55  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.946905  normal  0.024921 
 
 
-
 
NC_008463  PA14_67010  putative chemotaxis transducer  43.49 
 
 
647 aa  218  2e-55  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_5020  methyl-accepting chemotaxis sensory transducer  41.67 
 
 
638 aa  217  2.9999999999999998e-55  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_1324  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  44.83 
 
 
523 aa  217  2.9999999999999998e-55  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.587106  n/a   
 
 
-
 
NC_011901  Tgr7_2492  methyl-accepting chemotaxis sensory transducer  44.94 
 
 
572 aa  217  4e-55  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_2609  putative methyl-accepting chemotaxis sensory transducer  38.42 
 
 
621 aa  217  5e-55  Shewanella amazonensis SB2B  Bacteria  normal  0.206567  normal 
 
 
-
 
NC_007492  Pfl01_2907  chemotaxis sensory transducer  42.07 
 
 
541 aa  217  5e-55  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.300582 
 
 
-
 
NC_010501  PputW619_2263  methyl-accepting chemotaxis sensory transducer  40.5 
 
 
541 aa  216  5.9999999999999996e-55  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_2091  methyl-accepting chemotaxis sensory transducer  40.22 
 
 
541 aa  216  7e-55  Pseudomonas putida F1  Bacteria  normal  0.596764  normal 
 
 
-
 
NC_009901  Spea_3169  methyl-accepting chemotaxis sensory transducer  39.03 
 
 
620 aa  216  9.999999999999999e-55  Shewanella pealeana ATCC 700345  Bacteria  normal  0.225635  n/a   
 
 
-
 
NC_008463  PA14_43220  putative methyl-accepting chemotaxis transducer  40.4 
 
 
652 aa  215  9.999999999999999e-55  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.625872 
 
 
-
 
NC_004578  PSPTO_5160  methyl-accepting chemotaxis protein  42.77 
 
 
647 aa  215  9.999999999999999e-55  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.391343  n/a   
 
 
-
 
NC_007005  Psyr_0379  histidine kinase, HAMP region: chemotaxis sensory transducer  42.44 
 
 
647 aa  215  9.999999999999999e-55  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.454626  normal 
 
 
-
 
NC_009831  Ssed_3705  methyl-accepting chemotaxis sensory transducer  36.34 
 
 
541 aa  215  9.999999999999999e-55  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0963791  normal 
 
 
-
 
NC_009438  Sputcn32_1426  methyl-accepting chemotaxis sensory transducer  41.36 
 
 
634 aa  215  9.999999999999999e-55  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_2607  putative methyl-accepting chemotaxis sensory transducer  38.67 
 
 
541 aa  216  9.999999999999999e-55  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.00122932  normal 
 
 
-
 
NC_008789  Hhal_0167  methyl-accepting chemotaxis sensory transducer  40.17 
 
 
540 aa  216  9.999999999999999e-55  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_5553  methyl-accepting chemotaxis protein  41.14 
 
 
640 aa  214  1.9999999999999998e-54  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_04784  histidine kinase  40.91 
 
 
628 aa  214  1.9999999999999998e-54  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  39.88 
 
 
716 aa  214  1.9999999999999998e-54  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_007492  Pfl01_3768  chemotaxis sensory transducer  42.35 
 
 
560 aa  214  2.9999999999999995e-54  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_0445  methyl-accepting chemotaxis sensory transducer  42.12 
 
 
638 aa  214  2.9999999999999995e-54  Pseudomonas putida W619  Bacteria  normal  0.455391  normal 
 
 
-
 
NC_010322  PputGB1_2268  methyl-accepting chemotaxis sensory transducer  40.5 
 
 
541 aa  214  2.9999999999999995e-54  Pseudomonas putida GB-1  Bacteria  normal  0.255239  normal 
 
 
-
 
NC_008345  Sfri_0847  methyl-accepting chemotaxis sensory transducer  39.6 
 
 
620 aa  214  2.9999999999999995e-54  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.566037  n/a   
 
 
-
 
NC_004578  PSPTO_3279  methyl-accepting chemotaxis protein  40.46 
 
 
541 aa  214  3.9999999999999995e-54  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.149652  n/a   
 
 
-
 
NC_007005  Psyr_0380  histidine kinase, HAMP region: chemotaxis sensory transducer  41.35 
 
 
638 aa  214  3.9999999999999995e-54  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_3725  methyl-accepting chemotaxis sensory transducer  38.57 
 
 
620 aa  214  3.9999999999999995e-54  Shewanella woodyi ATCC 51908  Bacteria  normal  0.403145  normal 
 
 
-
 
NC_009512  Pput_0339  methyl-accepting chemotaxis sensory transducer  39.78 
 
 
541 aa  213  4.9999999999999996e-54  Pseudomonas putida F1  Bacteria  normal  0.722367  normal 
 
 
-
 
NC_007005  Psyr_0905  histidine kinase, HAMP region: chemotaxis sensory transducer  38.57 
 
 
640 aa  213  4.9999999999999996e-54  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.746842  normal 
 
 
-
 
NC_009092  Shew_0808  methyl-accepting chemotaxis sensory transducer  36.3 
 
 
554 aa  213  5.999999999999999e-54  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_0317  methyl-accepting chemotaxis sensory transducer  39.78 
 
 
541 aa  213  7e-54  Pseudomonas putida KT2440  Bacteria  normal  0.365849  decreased coverage  0.0000342214 
 
 
-
 
NC_004578  PSPTO_1059  methyl-accepting chemotaxis protein  39.14 
 
 
629 aa  213  7e-54  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_5092  histidine kinase, HAMP region: chemotaxis sensory transducer  41.14 
 
 
640 aa  213  7e-54  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4658  chemotaxis sensory transducer, Pas/Pac sensor  44.09 
 
 
529 aa  213  9e-54  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_2000  methyl-accepting chemotaxis sensory transducer  43.41 
 
 
560 aa  212  1e-53  Pseudomonas mendocina ymp  Bacteria  normal  0.0144557  normal  0.0324669 
 
 
-
 
NC_010322  PputGB1_0340  methyl-accepting chemotaxis sensory transducer  40.57 
 
 
541 aa  212  1e-53  Pseudomonas putida GB-1  Bacteria  normal  0.582352  normal 
 
 
-
 
NC_004578  PSPTO_2616  methyl-accepting chemotaxis protein  38.64 
 
 
633 aa  212  1e-53  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  decreased coverage  0.00438795  n/a   
 
 
-
 
NC_008345  Sfri_0080  methyl-accepting chemotaxis sensory transducer  41.08 
 
 
636 aa  212  1e-53  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_4404  methyl-accepting chemotaxis sensory transducer  41.08 
 
 
638 aa  212  1e-53  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0156105 
 
 
-
 
NC_009997  Sbal195_3742  methyl-accepting chemotaxis sensory transducer  38.33 
 
 
620 aa  211  2e-53  Shewanella baltica OS195  Bacteria  normal  normal  0.35347 
 
 
-
 
NC_008739  Maqu_3979  methyl-accepting chemotaxis sensory transducer  45.02 
 
 
552 aa  211  2e-53  Marinobacter aquaeolei VT8  Bacteria  normal  0.594367  n/a   
 
 
-
 
NC_009439  Pmen_2471  methyl-accepting chemotaxis sensory transducer  39.54 
 
 
425 aa  211  2e-53  Pseudomonas mendocina ymp  Bacteria  normal  0.817651  normal 
 
 
-
 
NC_010501  PputW619_4890  methyl-accepting chemotaxis sensory transducer  41.28 
 
 
541 aa  211  2e-53  Pseudomonas putida W619  Bacteria  normal  0.452969  normal  0.355365 
 
 
-
 
NC_011663  Sbal223_3551  methyl-accepting chemotaxis sensory transducer  38.33 
 
 
620 aa  211  2e-53  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.00183884 
 
 
-
 
NC_008577  Shewana3_3299  methyl-accepting chemotaxis sensory transducer  36.75 
 
 
554 aa  211  2e-53  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0691  methyl-accepting chemotaxis sensory transducer  38.33 
 
 
620 aa  211  2e-53  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_4141  chemotaxis transducer  42.53 
 
 
541 aa  211  2e-53  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A0868  methyl-accepting chemotaxis protein  35.93 
 
 
536 aa  211  2e-53  Vibrio cholerae O395  Bacteria  hitchhiker  0.000231989  n/a   
 
 
-
 
NC_008740  Maqu_0633  methyl-accepting chemotaxis sensory transducer  45.02 
 
 
552 aa  211  2e-53  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  40.51 
 
 
712 aa  211  3e-53  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_008700  Sama_2880  putative methyl-accepting chemotaxis sensory transducer  36.11 
 
 
558 aa  211  3e-53  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  38.14 
 
 
712 aa  210  4e-53  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_007005  Psyr_2634  histidine kinase, HAMP region: chemotaxis sensory transducer  39.48 
 
 
542 aa  210  4e-53  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.917034  normal 
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  39.94 
 
 
713 aa  210  4e-53  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_009092  Shew_2954  methyl-accepting chemotaxis sensory transducer  37.99 
 
 
620 aa  210  4e-53  Shewanella loihica PV-4  Bacteria  decreased coverage  0.000679912  normal 
 
 
-
 
NC_004347  SO_3582  methyl-accepting chemotaxis protein  37.3 
 
 
541 aa  210  5e-53  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009092  Shew_1929  methyl-accepting chemotaxis sensory transducer  42.55 
 
 
662 aa  210  5e-53  Shewanella loihica PV-4  Bacteria  normal  0.23754  normal  0.0188929 
 
 
-
 
NC_009665  Shew185_3619  methyl-accepting chemotaxis sensory transducer  38.33 
 
 
620 aa  210  6e-53  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_1998  methyl-accepting chemotaxis sensory transducer  43.79 
 
 
714 aa  210  6e-53  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.0164438 
 
 
-
 
NC_009656  PSPA7_5811  putative chemotaxis transducer  42.86 
 
 
647 aa  208  1e-52  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_29760  putative chemotaxis transducer  41.52 
 
 
714 aa  208  1e-52  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>