| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5554 |
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| Symbol | |
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| ID | 1187246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 6327228 |
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| End bp | 6329258 |
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| Gene Length | 2031 bp |
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| Protein Length | 676 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637396873 |
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| Product | methyl-accepting chemotaxis protein |
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| Protein accession | NP_795278 |
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| Protein GI | 28872659 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATCC TTTCGCCTGG TATCTACCTG ACCAACCGCC TGCGCTTCCC TGCCAAGTTC
GCCGTATTAG CCATCATCGT CGTCATTCCG CTCATCGTTC TGGGGTTGCG GGTGTTCAAC
AGCCTGAACT CGAGCATCGA CACCGTCGCC CAAGAGCGCG TCGGTCGAGA GTACCTGCAC
GTCGTAACGC CCATCCTGCG GCTGTCCATG CTGCAGCGTG CGGCAACCAA CCGTTTGCTC
GCTGGCGATG CGTCCGCGGC TCAAGACCTG GTCACCAACC GTGGCCAACT CGAGACAGCT
TTCAATAACC TTGCCGACAT GGACGCCCGT CAGGGCCGCA CGCTGGAAAC CGAGAATCGC
GTGCAGCGCC TGCGTGACGG TGCCCGCTCG TTGATGGATA GCGTCAAGCC GGGCCTTGCG
CAAGACGAGT TTTTTGCACA GTGGAGCGAG CAACTGGCTC AGACACTCAA CTTTATCTAC
TACGTTTCGG CCACCTCGGG CATGGTGCTG GACGAAGATT ACGCCTCGCT GTTTATGATC
GACCTGAGCA CCATCAGGAT GCCTCGGGAA ATCAACGTGG CCGGTCAGAT CCGTGGCATT
ACGGCGGGAT TGAGCACCGG GCAGGGCCTG AACGTACCGA TGCGCGGTTC GCTTGAAAGC
CTGTTGAAGA TCGAGCTGCA ATTTCGCGCG GAGCTTGAGC AAAGCATTCG CCTGCTCAAG
CGTCGCGCTC CAGAACTCGC TGCCCGTATT GGCGAGCCGA TAGCCACTGC CACCTCAACG
ATGGACAGCT TTCGCAACGA TCTCTCGACC TACGTCAGAG GTTCTGAGTT TTCAGTGCAG
CAGGGTCAGG CGCTGAGTGC TCGCGGCAAT GTCGTGGTCG CGGGCCTCTA CAAGGCTCAG
GACGAAATTC AGACCGCGCT TCAGGGCGAA CTGGATGCGC GTTACGACGC GCTCCTGCGT
CAACGCGAAG TTGTCATCGC CATGTGCGTG GTGATGGGCC TATTGTTGCT CTATGCGTTC
TGCAGCATTT ATCGCGCCTT GCGCGTTGCC ATCGACAGCC TGCTGGGTGT TACCCGGCGT
CTGGCAGACG GCGATCTGAG TGCCCGTGCG CAGGTGGTCA GCCAAGACGA AATCGCGGAT
ATCGGCAACG GCCTGAACGC GATGGCAGAG GCGTTCGCCA GCTCCATTTC GCACATGGAT
CGCACCTCCT ACGAGCTGTC CGACGTCGCT GCACGACTGG GCACCTCCAT CGGTCTGGCC
AAGCAGTCGA TGAACGCCCA GCAGGCTGAA ACCGAACAAG TGGCCACGGC CATCAACGAG
ATGACCGCGA GCGTCGCCGA CGTGGCGCAG AATACCGAAG GCGCAGCGAT GGCGGCTGAT
GCGGCAAACA CTGCGTCGCG TGACGGTTTG CGCATCATGG GCCAGACCCA CTCGACCATT
CAGGCGTTGG CTGAAGAGGT GGAAATCAGC GCCCAGAAAG TCCAGGCCCT GGCCCTGCAT
AGTCAGTCGA TTGGTGGCGT TATCCAGGTC ATCAGCACGA TTGCCGACCA GACCAACCTG
TTGGCCCTGA ACGCTGCCAT CGAAGCCGCA CGGGCCGGCG AGCAAGGGCG CGGGTTTGCG
GTGGTGGCTG ACGAAGTCCG CACCCTGGCA TCGCGCACCC AGGCTTCCAC CCAAGAGATC
CGCAGCATCA TCGAGCAACT GCAAAGTGCA ACCCATGCCG CCGTGCAACA GATGCAGGCC
GGGCAGCACA AGGCGCAGGC CTGTATCAGT GCGGCCAGCG AAGCATCGGG CAGCCTGTCG
AGCATCAGTC AGGGTGTGGA GCGTATCGTC GAGATGAACA CCCAGATCGC CAGCGCTGCT
GTGCAGCAGC ATGCGGTGTC CGAAGACATC AACCGCAACG TCATGGAGAT TCGCAACAGC
TCCGGGACCC TGATGCTGGG CATCGACAAC AATGCGGTCA CGGCCGAAGA GCTGGCGCGG
GTTGCCAGTG ACATGCGCAG TGTCGTGGCG CGCTTCAAAC TGGTTGCCTG A
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| Protein sequence | MNILSPGIYL TNRLRFPAKF AVLAIIVVIP LIVLGLRVFN SLNSSIDTVA QERVGREYLH
VVTPILRLSM LQRAATNRLL AGDASAAQDL VTNRGQLETA FNNLADMDAR QGRTLETENR
VQRLRDGARS LMDSVKPGLA QDEFFAQWSE QLAQTLNFIY YVSATSGMVL DEDYASLFMI
DLSTIRMPRE INVAGQIRGI TAGLSTGQGL NVPMRGSLES LLKIELQFRA ELEQSIRLLK
RRAPELAARI GEPIATATST MDSFRNDLST YVRGSEFSVQ QGQALSARGN VVVAGLYKAQ
DEIQTALQGE LDARYDALLR QREVVIAMCV VMGLLLLYAF CSIYRALRVA IDSLLGVTRR
LADGDLSARA QVVSQDEIAD IGNGLNAMAE AFASSISHMD RTSYELSDVA ARLGTSIGLA
KQSMNAQQAE TEQVATAINE MTASVADVAQ NTEGAAMAAD AANTASRDGL RIMGQTHSTI
QALAEEVEIS AQKVQALALH SQSIGGVIQV ISTIADQTNL LALNAAIEAA RAGEQGRGFA
VVADEVRTLA SRTQASTQEI RSIIEQLQSA THAAVQQMQA GQHKAQACIS AASEASGSLS
SISQGVERIV EMNTQIASAA VQQHAVSEDI NRNVMEIRNS SGTLMLGIDN NAVTAEELAR
VASDMRSVVA RFKLVA
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