Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3348 |
Symbol | |
ID | 3368875 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 4003979 |
End bp | 4005607 |
Gene Length | 1629 bp |
Protein Length | 542 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637653699 |
Product | histidine kinase, HAMP region: chemotaxis sensory transducer |
Protein accession | YP_236418 |
Protein GI | 66046577 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.946905 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.024921 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCCTGC GAAAACTCAA CCTGGCCGCG CGCTCGACGC TTTGTTTCGG CGTGTTCTGC CTGATGATCA TTGCCTTGGG CTTGCTTGCC CTGCGTCAGG CAGCCGAGCT CAATGCGGCG GAAAAATTCA TCGAGACCAA TGTGCTTCCG AGCGTGAAAC AGCTCGCATC GATCGATCGG GAGTTTGTCA GTATCCGCGG CAACAACGCC CGTGTGCGCA ATCCGATTGA GCCGCAGGAT CGAAAGACCA AGGCGCTCAG CGATATCCAG CAGTCGCGCT CGCTGATCGC CGGCTATTTT GACACGCTCG GCAAATTGAT CGTGACTCCG CAAGGGCGCC AGGCCTTCGA CGAATTGTCC CAGGCACAGG CCGGGTATCA GGTGGCACAG GATCGCTACC TCGCCTCGGT AGCCGCCGGC AATCTGGAAG CTGCAGTGGC AACTTCCAAT GGCGAAATGA AAAGCGCGGC CGATCAGGTT GAAACCGGGC TGAAGAAACT CATTGGCGTC AACGACGCCA AAGCCGAGAA AGCCGGCGCT GCCGCTAACG CTGCCTATCA GCAGACGCTG TGGATGGTGG GCATTTTCAT CACCGTAGGC GTCATCACCA CGCTGCTCCT CGCCTGGATG TACACCCGCA GTCTAACTGG CCCGATTGGC GATTCGTTGA GTATCGCGCA ACGCATTGCC ACCAATGATC TGAGCCAGGA CATCCCGCAA CATGGCACTG ACGAGGCGGC GAAACTGATT GCCGCACTCG CCACCATGCA GTCCAACCTG CGCAATGCCC TGACCCTGAT CGGCGACTCC TCCACCCAGC TGGCTGCGAC TTCCGAGGAA ATGCATGCCG TCACCGAAGA CGCCTCGCGC ACCATTCTGC GCCAGACCAA CGAGATCGAA ATGGCAGCCA CCGCCGTCAA CGAGATGAGC GCGGCAGTAG AGGAAGTGGC CAGTAACGCC GCATCGGCAT CTGAGGTGAC CTCGCAATCC AGCACTGCAG CCATGGCTGG GCGCGCGCAG GTCGATGAGA CCGTCACGGC GATCAACCTG ATGGTCTCCA AGGTGCAGAT CACCTCCACT GAGGTACAAG GCCTGGCCGT CATGGCGACG GATATCAGTA AGGTGCTGGA TGTGATCCGT GCCATCGCGG AACAGACCAA CCTGCTGGCA CTCAACGCAG CCATCGAAGC GGCTCGTGCA GGTGAAGCCG GGCGGGGTTT TGCGGTGGTG GCGGACGAGG TCAGGGCGCT GGCGCATCGC ACCCAGCAAT CAACCCGTGA AATCGAACAG ATGGTCGACT CGATCCAGAC CGGCACCGGC AATGCTGTCA GCGCAATGGA GCAGACCAGC GTTCAGGCCC ACAAGACACT GGAGATGGCC AATGGCGCTG GCAAGGCGCT GCTGGAAATC ACCGAATCCA TCAGCCAGAT CAATGAACGC AACCTGATGA TCGCCACCGC CGCCGAAGAA CAGGCTCAGG TCGCTCGAGA AGTCGACAGG AGCCTGGTCA GCATTCGTGA TCTGTCCAGC CAGACATCCG AGGGCTCCAA TCAGACGGCC ATCGCCACTG CCGAACTGTC GACCCTGGCT TCAAGCCTGA ACCGTCTCAC CAAGCAATTC CGCGTTTAA
|
Protein sequence | MILRKLNLAA RSTLCFGVFC LMIIALGLLA LRQAAELNAA EKFIETNVLP SVKQLASIDR EFVSIRGNNA RVRNPIEPQD RKTKALSDIQ QSRSLIAGYF DTLGKLIVTP QGRQAFDELS QAQAGYQVAQ DRYLASVAAG NLEAAVATSN GEMKSAADQV ETGLKKLIGV NDAKAEKAGA AANAAYQQTL WMVGIFITVG VITTLLLAWM YTRSLTGPIG DSLSIAQRIA TNDLSQDIPQ HGTDEAAKLI AALATMQSNL RNALTLIGDS STQLAATSEE MHAVTEDASR TILRQTNEIE MAATAVNEMS AAVEEVASNA ASASEVTSQS STAAMAGRAQ VDETVTAINL MVSKVQITST EVQGLAVMAT DISKVLDVIR AIAEQTNLLA LNAAIEAARA GEAGRGFAVV ADEVRALAHR TQQSTREIEQ MVDSIQTGTG NAVSAMEQTS VQAHKTLEMA NGAGKALLEI TESISQINER NLMIATAAEE QAQVAREVDR SLVSIRDLSS QTSEGSNQTA IATAELSTLA SSLNRLTKQF RV
|
| |