More than 300 homologs were found in PanDaTox collection
for query gene TK90_2562 on replicon NC_013889
Organism: Thioalkalivibrio sp. K90mix



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013889  TK90_2562  methyl-accepting chemotaxis sensory transducer  100 
 
 
671 aa  1324    Thioalkalivibrio sp. K90mix  Bacteria  normal  hitchhiker  0.0046581 
 
 
-
 
NC_011901  Tgr7_0851  methyl-accepting chemotaxis sensory transducer  40.75 
 
 
674 aa  468  9.999999999999999e-131  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.244273  n/a   
 
 
-
 
NC_013422  Hneap_0470  methyl-accepting chemotaxis sensory transducer  31.48 
 
 
668 aa  291  3e-77  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  43.33 
 
 
637 aa  275  2.0000000000000002e-72  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  44.23 
 
 
541 aa  271  2e-71  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  47.26 
 
 
637 aa  257  4e-67  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  43.84 
 
 
541 aa  256  1.0000000000000001e-66  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_007520  Tcr_0570  methyl-accepting chemotaxis sensory transducer  27.58 
 
 
674 aa  253  7e-66  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  43.54 
 
 
564 aa  251  2e-65  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_0167  methyl-accepting chemotaxis sensory transducer  42.94 
 
 
540 aa  249  8e-65  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  40.62 
 
 
712 aa  242  2e-62  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  40.62 
 
 
712 aa  241  2.9999999999999997e-62  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_008577  Shewana3_3611  methyl-accepting chemotaxis sensory transducer  41.76 
 
 
634 aa  241  4e-62  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_0987  methyl-accepting chemotaxis protein  39.66 
 
 
554 aa  240  5.999999999999999e-62  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  43.6 
 
 
636 aa  238  3e-61  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_009665  Shew185_3494  methyl-accepting chemotaxis sensory transducer  39.44 
 
 
554 aa  235  2.0000000000000002e-60  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3422  methyl-accepting chemotaxis sensory transducer with Cache sensor  39.44 
 
 
554 aa  235  2.0000000000000002e-60  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0870  methyl-accepting chemotaxis sensory transducer  40.23 
 
 
554 aa  235  2.0000000000000002e-60  Shewanella baltica OS155  Bacteria  normal  0.0571565  n/a   
 
 
-
 
NC_009997  Sbal195_3617  methyl-accepting chemotaxis sensory transducer  40.23 
 
 
554 aa  235  2.0000000000000002e-60  Shewanella baltica OS195  Bacteria  normal  normal  0.964358 
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  40.9 
 
 
716 aa  234  3e-60  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_008321  Shewmr4_0824  methyl-accepting chemotaxis sensory transducer  39.38 
 
 
554 aa  234  3e-60  Shewanella sp. MR-4  Bacteria  normal  hitchhiker  0.00067966 
 
 
-
 
NC_011901  Tgr7_1672  methyl-accepting chemotaxis sensory transducer  42.47 
 
 
544 aa  234  3e-60  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_0619  methyl-accepting chemotaxis sensory transducer  39.72 
 
 
634 aa  234  4.0000000000000004e-60  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_3299  methyl-accepting chemotaxis sensory transducer  38.53 
 
 
554 aa  234  5e-60  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  39.2 
 
 
713 aa  234  5e-60  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_004347  SO_4053  methyl-accepting chemotaxis protein  41.14 
 
 
634 aa  234  6e-60  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009092  Shew_0808  methyl-accepting chemotaxis sensory transducer  39.27 
 
 
554 aa  233  6e-60  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_3200  methyl-accepting chemotaxis sensory transducer  38.86 
 
 
554 aa  233  7.000000000000001e-60  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_0837  methyl-accepting chemotaxis sensory transducer  41.64 
 
 
554 aa  231  3e-59  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3199  methyl-accepting chemotaxis sensory transducer  37.96 
 
 
554 aa  231  4e-59  Shewanella sp. MR-7  Bacteria  normal  normal  0.927661 
 
 
-
 
NC_008322  Shewmr7_0630  methyl-accepting chemotaxis sensory transducer  41.56 
 
 
554 aa  230  7e-59  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_0581  methyl-accepting chemotaxis sensory transducer  39.38 
 
 
554 aa  229  1e-58  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_3759  methyl-accepting chemotaxis sensory transducer  40.55 
 
 
554 aa  228  2e-58  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0990388  normal 
 
 
-
 
NC_004578  PSPTO_3098  methyl-accepting chemotaxis protein  40.61 
 
 
642 aa  228  2e-58  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.398555  n/a   
 
 
-
 
NC_008577  Shewana3_3491  methyl-accepting chemotaxis sensory transducer  41.25 
 
 
554 aa  229  2e-58  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_3323  methyl-accepting chemotaxis sensory transducer  41.25 
 
 
554 aa  228  2e-58  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  38.2 
 
 
638 aa  229  2e-58  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_008700  Sama_2609  putative methyl-accepting chemotaxis sensory transducer  35 
 
 
621 aa  228  3e-58  Shewanella amazonensis SB2B  Bacteria  normal  0.206567  normal 
 
 
-
 
NC_009439  Pmen_2650  methyl-accepting chemotaxis sensory transducer  41.19 
 
 
568 aa  228  3e-58  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_3601  methyl-accepting chemotaxis sensory transducer with Cache sensor  39.53 
 
 
554 aa  228  3e-58  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0641  methyl-accepting chemotaxis sensory transducer  39.41 
 
 
568 aa  228  4e-58  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3789  methyl-accepting chemotaxis sensory transducer  39.41 
 
 
554 aa  227  4e-58  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_3532  methyl-accepting chemotaxis sensory transducer  40.6 
 
 
555 aa  226  8e-58  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_3052  methyl-accepting chemotaxis sensory transducer  39.53 
 
 
554 aa  226  8e-58  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_3666  methyl-accepting chemotaxis sensory transducer  39.17 
 
 
554 aa  226  8e-58  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2966  histidine kinase, HAMP region: chemotaxis sensory transducer  40.33 
 
 
642 aa  224  4.9999999999999996e-57  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.249585  normal  0.113943 
 
 
-
 
NC_009092  Shew_0085  methyl-accepting chemotaxis sensory transducer  37.37 
 
 
638 aa  223  6e-57  Shewanella loihica PV-4  Bacteria  normal  0.0647334  normal 
 
 
-
 
NC_009438  Sputcn32_2116  methyl-accepting chemotaxis sensory transducer  40.35 
 
 
545 aa  223  7e-57  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_2412  methyl-accepting chemotaxis sensory transducer  38.59 
 
 
545 aa  223  9e-57  Shewanella sediminis HAW-EB3  Bacteria  normal  0.516535  hitchhiker  0.00000653474 
 
 
-
 
NC_009456  VC0395_0962  methyl-accepting chemotaxis protein  36.72 
 
 
643 aa  222  9.999999999999999e-57  Vibrio cholerae O395  Bacteria  hitchhiker  0.000917898  n/a   
 
 
-
 
NC_011901  Tgr7_1425  methyl-accepting chemotaxis sensory transducer  43.67 
 
 
438 aa  223  9.999999999999999e-57  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_2601  chemotaxis sensory transducer  39.03 
 
 
569 aa  222  1.9999999999999999e-56  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.441915  normal  0.36116 
 
 
-
 
NC_009901  Spea_4196  methyl-accepting chemotaxis sensory transducer  36.19 
 
 
552 aa  221  3e-56  Shewanella pealeana ATCC 700345  Bacteria  normal  0.14959  n/a   
 
 
-
 
NC_009831  Ssed_4404  methyl-accepting chemotaxis sensory transducer  37.53 
 
 
638 aa  221  3e-56  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0156105 
 
 
-
 
NC_009439  Pmen_1701  methyl-accepting chemotaxis sensory transducer  40.23 
 
 
650 aa  221  5e-56  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.076135 
 
 
-
 
NC_008700  Sama_2880  putative methyl-accepting chemotaxis sensory transducer  42.16 
 
 
558 aa  220  5e-56  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_3502  methyl-accepting chemotaxis sensory transducer  41.6 
 
 
620 aa  221  5e-56  Shewanella sediminis HAW-EB3  Bacteria  normal  0.666992  normal  0.2901 
 
 
-
 
NC_011901  Tgr7_2492  methyl-accepting chemotaxis sensory transducer  41.62 
 
 
572 aa  220  6e-56  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_0081  putative methyl-accepting chemotaxis sensory transducer  36 
 
 
544 aa  220  6e-56  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_3169  methyl-accepting chemotaxis sensory transducer  38.4 
 
 
620 aa  220  6e-56  Shewanella pealeana ATCC 700345  Bacteria  normal  0.225635  n/a   
 
 
-
 
NC_009092  Shew_2954  methyl-accepting chemotaxis sensory transducer  40.17 
 
 
620 aa  220  7e-56  Shewanella loihica PV-4  Bacteria  decreased coverage  0.000679912  normal 
 
 
-
 
NC_008700  Sama_0767  putative methyl-accepting chemotaxis sensory transducer  32.53 
 
 
546 aa  220  7.999999999999999e-56  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_1798  histidine kinase, HAMP region: chemotaxis sensory transducer  40.99 
 
 
681 aa  219  8.999999999999998e-56  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.668901  normal  0.381267 
 
 
-
 
NC_009512  Pput_2828  methyl-accepting chemotaxis sensory transducer  37.61 
 
 
544 aa  219  1e-55  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_0080  methyl-accepting chemotaxis sensory transducer  40.06 
 
 
636 aa  219  1e-55  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_0160  methyl-accepting chemotaxis sensory transducer  42.01 
 
 
653 aa  219  1e-55  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_2364  methyl-accepting chemotaxis sensory transducer  37.54 
 
 
622 aa  219  2e-55  Shewanella baltica OS155  Bacteria  normal  0.493821  n/a   
 
 
-
 
NC_008789  Hhal_0549  methyl-accepting chemotaxis sensory transducer  39.08 
 
 
640 aa  218  2e-55  Halorhodospira halophila SL1  Bacteria  normal  0.43692  n/a   
 
 
-
 
NC_009784  VIBHAR_06314  histidine kinase  40.12 
 
 
623 aa  218  2e-55  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_004347  SO_2240  methyl-accepting chemotaxis protein  39.47 
 
 
545 aa  218  2.9999999999999998e-55  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_010506  Swoo_3725  methyl-accepting chemotaxis sensory transducer  39.6 
 
 
620 aa  218  2.9999999999999998e-55  Shewanella woodyi ATCC 51908  Bacteria  normal  0.403145  normal 
 
 
-
 
NC_011663  Sbal223_2000  methyl-accepting chemotaxis sensory transducer with Cache sensor  39.47 
 
 
545 aa  218  2.9999999999999998e-55  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.0000194984 
 
 
-
 
NC_009052  Sbal_2358  methyl-accepting chemotaxis sensory transducer  39.47 
 
 
545 aa  218  2.9999999999999998e-55  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_05646  histidine kinase  37.53 
 
 
482 aa  218  4e-55  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_003910  CPS_4964  methyl-accepting chemotaxis protein  38.94 
 
 
545 aa  217  5e-55  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_000971  methyl-accepting chemotaxis protein  37.85 
 
 
553 aa  217  5e-55  Vibrio sp. Ex25  Bacteria  normal  0.370017  n/a   
 
 
-
 
NC_007912  Sde_0391  methyl-accepting chemotaxis sensory transducer  38.75 
 
 
499 aa  217  5.9999999999999996e-55  Saccharophagus degradans 2-40  Bacteria  normal  0.0811848  normal 
 
 
-
 
NC_009665  Shew185_2347  methyl-accepting chemotaxis sensory transducer  39.18 
 
 
545 aa  216  8e-55  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_2463  methyl-accepting chemotaxis sensory transducer  39.18 
 
 
545 aa  216  8e-55  Shewanella baltica OS195  Bacteria  normal  0.0650014  normal  0.35347 
 
 
-
 
NC_008577  Shewana3_2254  methyl-accepting chemotaxis sensory transducer  39.18 
 
 
545 aa  216  8e-55  Shewanella sp. ANA-3  Bacteria  normal  normal  0.492 
 
 
-
 
NC_002947  PP_0320  methyl-accepting chemotaxis sensory transducer  40.85 
 
 
645 aa  216  9.999999999999999e-55  Pseudomonas putida KT2440  Bacteria  normal  decreased coverage  0.0000409011 
 
 
-
 
NC_002947  PP_2861  methyl-accepting chemotaxis sensory transducer  37.61 
 
 
544 aa  216  9.999999999999999e-55  Pseudomonas putida KT2440  Bacteria  normal  normal  0.445183 
 
 
-
 
NC_004578  PSPTO_3680  methyl-accepting chemotaxis protein  40.29 
 
 
676 aa  216  9.999999999999999e-55  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_0343  methyl-accepting chemotaxis sensory transducer  41.16 
 
 
645 aa  216  9.999999999999999e-55  Pseudomonas putida GB-1  Bacteria  normal  0.675969  normal 
 
 
-
 
NC_009784  VIBHAR_04784  histidine kinase  39.53 
 
 
628 aa  215  1.9999999999999998e-54  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007005  Psyr_5093  histidine kinase, HAMP region: chemotaxis sensory transducer  39.49 
 
 
676 aa  216  1.9999999999999998e-54  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_2757  methyl-accepting chemotaxis sensory transducer  38.79 
 
 
544 aa  216  1.9999999999999998e-54  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_0342  methyl-accepting chemotaxis sensory transducer  40.85 
 
 
645 aa  215  1.9999999999999998e-54  Pseudomonas putida F1  Bacteria  normal  0.860801  normal 
 
 
-
 
NC_004578  PSPTO_3379  methyl-accepting chemotaxis protein  38.75 
 
 
559 aa  214  2.9999999999999995e-54  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_1770  methyl-accepting chemotaxis sensory transducer  37.43 
 
 
538 aa  214  2.9999999999999995e-54  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_4887  methyl-accepting chemotaxis sensory transducer  41.16 
 
 
645 aa  214  2.9999999999999995e-54  Pseudomonas putida W619  Bacteria  normal  normal  0.658451 
 
 
-
 
NC_009439  Pmen_2174  methyl-accepting chemotaxis sensory transducer  41.52 
 
 
544 aa  214  3.9999999999999995e-54  Pseudomonas mendocina ymp  Bacteria  normal  decreased coverage  0.00506259 
 
 
-
 
NC_013456  VEA_003896  methyl-accepting chemotaxis protein  34.79 
 
 
545 aa  214  3.9999999999999995e-54  Vibrio sp. Ex25  Bacteria  decreased coverage  0.000288698  n/a   
 
 
-
 
NC_009997  Sbal195_0563  methyl-accepting chemotaxis sensory transducer  42.82 
 
 
633 aa  214  3.9999999999999995e-54  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_0539  methyl-accepting chemotaxis sensory transducer  42.82 
 
 
633 aa  214  3.9999999999999995e-54  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0567  methyl-accepting chemotaxis sensory transducer  42.82 
 
 
633 aa  214  3.9999999999999995e-54  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009456  VC0395_0316  methyl-accepting chemotaxis protein  40.8 
 
 
652 aa  214  4.9999999999999996e-54  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1324  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  39.6 
 
 
523 aa  214  4.9999999999999996e-54  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.587106  n/a   
 
 
-
 
NC_010322  PputGB1_2920  methyl-accepting chemotaxis sensory transducer  39.09 
 
 
544 aa  214  4.9999999999999996e-54  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_1767  methyl-accepting chemotaxis sensory transducer  38.89 
 
 
545 aa  214  4.9999999999999996e-54  Shewanella sp. MR-4  Bacteria  normal  0.381763  normal 
 
 
-
 
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