Gene Hneap_0470 details

Gene Information

• Locus tag: Hneap_0470
• ID: 8533594
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halothiobacillus neapolitanus c2
• Kingdom: Bacteria
• Replicon accession: NC_013422
• Strand: +
• Start bp: 494874
• End bp: 496880
• Gene Length: 2007 bp
• Protein Length: 668 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 646382850
• Product: methyl-accepting chemotaxis sensory transducer
• Protein accession: YP_003262373
• Protein GI: 261855090
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACCGCT GGATTTCACG TTTTTCAATC GCACAAAAAA ATCTGTTCAG TTACGGACTT 
ATTCTGGTGC TGATGTGCTC GATGGCCATT CTGACTTATT TCAACATGAA CCGTATTCAA 
GGCATGACGA AAGAGGTTAT TGCCCAGCGG CAGCCTGCGG CCTTCGCGGC GGATGGTATT 
CGTGTCCAGC TTGAGCGGGC GATGGCTTCC GTCGGTCTGT ATTTGCAGAG CAAAAGTCCT 
GCAGACAAGA AACGATTTGA TGAAGCCATT TCGGGTATTA GTCAGGAGCA AGCCGCGTTA 
AAGCAACATT CCGACGAATC TCTGGATGGT CTGGATGCCG GTCTGAAAAC CTTTGTTACC 
GATGCCAACG AGGTAATGAA GATATCTGCC GACGATAAAC TGAATATGCC CGGTATGGAT 
TATGCAAATC AGAACGTCAA TCCTCTATCG ATTCAAATTT CCGGATTGAT GGGCACCTTG 
ATTTCGGCTG AGGCAGATGC GGATGCGGGC GTGCTTCCAC GCCGGGCGTT GGTGCTCGAA 
CTGGCGCGTC TGCGCGGCGA GTGGGGTGAT GTTCTGGCGG GTTTGCGCGG TTTCATGGCG 
TTTCGCAGCC CCGCACTGGA GAAAAACTTC AATCTTTACA CCGCCGAAGT GCTCAAGCGC 
ACACAAGAAA TCAATACCAA TTACGGCAAT CTGCTGACGT TCGAGCAGCA GGATGCGGTT 
GATCAGCTTC TGAAGTTGTT GCCTCAGTTC ATTGATCAGG CGGGGAAAGC GTTTGCGATT 
CACAAGTCGG ATAAATGGCG TATGGATGCC TATCTTGTTC GCACCAAACT GACGCCGGCA 
TTTGCAGATG TCGAATCCAG CGTGAATGAG ATCGTGAAAC ATGAACAGTC ACTCATCCAT 
GGGCAGTCGA AGGTGATGGA TCAGACCATC AGCAATATTG CCTTTGGGCA GGTGGGGCTG 
GTTTTGTTGG GGATACTTGT CATCGTGGCC TCTGCTTTGC TGTCGATGGT CACGATCTCT 
TCGCCACTGC GTCTGGTGGC GGAACGGATG CGCGATATTG CCGAAGGTGA CGGCGACCTG 
ACCCGTCGAC TGCCGGTGAA CGGCAAGGAT GAAATTGCCG ATGTCAGCCG CGCGTTCAAT 
ACCTTTGCCG AGACCGCTCA CAAACTGGTT TCCCAGGTTG TGATGACTAC CCGCTCCCTG 
AGTGATTCTG CTGATCGATT GAACGATTCA TCAGCTCGTG CCCAACAGGG CGCAGCCCGA 
CAGGCACGGG ATACCGAGGC GCTCGTCACC GGCATGAGCC AAACGCTTGA AGCGGCAGAA 
GATGTGGCGC GTAGTGCCGA AACCGCCAGT GCGTCGGTAC AGGAGGCAAA CGACAAGCTG 
AGTGAAGGCT TGGCTAAGGT AGATGTCAGC ACGCACAGTG CCGAACAACT CGATTCGGTG 
CTGCTGCGCG CCGAGCAGAA AATCCATGAA CTTTCCAACC AGAGCCAGAC CATCGGCAAG 
GTGCTGGATG TCATTCGGGC AATCGCTGAC CAAACCAACC TCCTGGCACT GAATGCAGCC 
ATTGAGGCAG CGCGGGCCGG TGAGCACGGA CGGGGGTTTG CCGTGGTGGC AGAAGAAGTT 
CGCTCGCTGG CGACGCGCAC TCAGGAATCC ACGCGGGAAA TCTCTGGCAT TATCAGCCAG 
TTGCAATCGG GCGCGCAGGA GGCCGTTTCC GCGATGGGTG AAGGTCGCGA AGTGAGTCAT 
GAAAGCCTGG ATGCCATTAC CCAGGCCAAC CAGATGCTGA TCAATATCGC TCAGGCTTTC 
GGGCATTTGA GTGATATGAG CGTGCGCATT GCCGCCGCCG CCGAGGAGCA GACCGCTGTT 
GCCAGCGGCA TGAAGCAGAA TATCGAATCC ATCAATAGTA CGGCTGCCGA CGCCGCCAAG 
CAGGGTGAGG AGATATCCTC TTCCGGAACG GATGTGTCCC AGCAGGCACG TACGCTGGCG 
GAACTGGTCC GACAGTTCAA GATCTAG 

 

Protein sequence

MNRWISRFSI AQKNLFSYGL ILVLMCSMAI LTYFNMNRIQ GMTKEVIAQR QPAAFAADGI 
RVQLERAMAS VGLYLQSKSP ADKKRFDEAI SGISQEQAAL KQHSDESLDG LDAGLKTFVT 
DANEVMKISA DDKLNMPGMD YANQNVNPLS IQISGLMGTL ISAEADADAG VLPRRALVLE 
LARLRGEWGD VLAGLRGFMA FRSPALEKNF NLYTAEVLKR TQEINTNYGN LLTFEQQDAV 
DQLLKLLPQF IDQAGKAFAI HKSDKWRMDA YLVRTKLTPA FADVESSVNE IVKHEQSLIH 
GQSKVMDQTI SNIAFGQVGL VLLGILVIVA SALLSMVTIS SPLRLVAERM RDIAEGDGDL 
TRRLPVNGKD EIADVSRAFN TFAETAHKLV SQVVMTTRSL SDSADRLNDS SARAQQGAAR 
QARDTEALVT GMSQTLEAAE DVARSAETAS ASVQEANDKL SEGLAKVDVS THSAEQLDSV 
LLRAEQKIHE LSNQSQTIGK VLDVIRAIAD QTNLLALNAA IEAARAGEHG RGFAVVAEEV 
RSLATRTQES TREISGIISQ LQSGAQEAVS AMGEGREVSH ESLDAITQAN QMLINIAQAF 
GHLSDMSVRI AAAAEEQTAV ASGMKQNIES INSTAADAAK QGEEISSSGT DVSQQARTLA 
ELVRQFKI