More than 300 homologs were found in PanDaTox collection
for query gene Sfri_1770 on replicon NC_008345
Organism: Shewanella frigidimarina NCIMB 400



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008345  Sfri_1770  methyl-accepting chemotaxis sensory transducer  100 
 
 
538 aa  1076    Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_1767  methyl-accepting chemotaxis sensory transducer  55.41 
 
 
545 aa  560  1e-158  Shewanella sp. MR-4  Bacteria  normal  0.381763  normal 
 
 
-
 
NC_008322  Shewmr7_1845  methyl-accepting chemotaxis sensory transducer  55.41 
 
 
545 aa  559  1e-158  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_2240  methyl-accepting chemotaxis protein  55.05 
 
 
545 aa  556  1e-157  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008577  Shewana3_2254  methyl-accepting chemotaxis sensory transducer  55.29 
 
 
545 aa  553  1e-156  Shewanella sp. ANA-3  Bacteria  normal  normal  0.492 
 
 
-
 
NC_009438  Sputcn32_2116  methyl-accepting chemotaxis sensory transducer  52.84 
 
 
545 aa  539  9.999999999999999e-153  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_2358  methyl-accepting chemotaxis sensory transducer  53.66 
 
 
545 aa  529  1e-149  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_2347  methyl-accepting chemotaxis sensory transducer  53.85 
 
 
545 aa  531  1e-149  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_2000  methyl-accepting chemotaxis sensory transducer with Cache sensor  53.85 
 
 
545 aa  530  1e-149  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.0000194984 
 
 
-
 
NC_009997  Sbal195_2463  methyl-accepting chemotaxis sensory transducer  53.85 
 
 
545 aa  531  1e-149  Shewanella baltica OS195  Bacteria  normal  0.0650014  normal  0.35347 
 
 
-
 
NC_009831  Ssed_2412  methyl-accepting chemotaxis sensory transducer  50.92 
 
 
545 aa  498  1e-139  Shewanella sediminis HAW-EB3  Bacteria  normal  0.516535  hitchhiker  0.00000653474 
 
 
-
 
NC_010506  Swoo_2194  methyl-accepting chemotaxis sensory transducer  51.47 
 
 
545 aa  484  1e-135  Shewanella woodyi ATCC 51908  Bacteria  normal  hitchhiker  0.00216283 
 
 
-
 
NC_009092  Shew_1868  methyl-accepting chemotaxis sensory transducer  50.55 
 
 
545 aa  473  1e-132  Shewanella loihica PV-4  Bacteria  normal  hitchhiker  0.0000255174 
 
 
-
 
NC_009901  Spea_1997  methyl-accepting chemotaxis sensory transducer  49.91 
 
 
546 aa  455  1.0000000000000001e-126  Shewanella pealeana ATCC 700345  Bacteria  normal  0.179465  n/a   
 
 
-
 
NC_008700  Sama_1653  putative methyl-accepting chemotaxis sensory transducer  48.26 
 
 
538 aa  441  9.999999999999999e-123  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_2212  methyl-accepting chemotaxis sensory transducer  33.64 
 
 
549 aa  275  1.0000000000000001e-72  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_2119  methyl-accepting chemotaxis sensory transducer  34.12 
 
 
548 aa  271  2e-71  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_2327  putative methyl-accepting chemotaxis sensory transducer  32.66 
 
 
554 aa  258  2e-67  Shewanella amazonensis SB2B  Bacteria  normal  0.644098  normal  0.637343 
 
 
-
 
NC_009831  Ssed_1983  methyl-accepting chemotaxis sensory transducer  33.03 
 
 
548 aa  256  8e-67  Shewanella sediminis HAW-EB3  Bacteria  decreased coverage  0.000213036  normal  0.437149 
 
 
-
 
NC_010506  Swoo_2617  methyl-accepting chemotaxis sensory transducer  33.99 
 
 
548 aa  244  3.9999999999999997e-63  Shewanella woodyi ATCC 51908  Bacteria  normal  0.224982  normal  0.210295 
 
 
-
 
NC_003910  CPS_4964  methyl-accepting chemotaxis protein  32.01 
 
 
545 aa  238  1e-61  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_2601  chemotaxis sensory transducer  32.41 
 
 
569 aa  238  2e-61  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.441915  normal  0.36116 
 
 
-
 
NC_002939  GSU1030  methyl-accepting chemotaxis protein  32.62 
 
 
549 aa  237  4e-61  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0085  methyl-accepting chemotaxis sensory transducer  33.19 
 
 
638 aa  232  1e-59  Shewanella loihica PV-4  Bacteria  normal  0.0647334  normal 
 
 
-
 
NC_009439  Pmen_3309  methyl-accepting chemotaxis sensory transducer  41.82 
 
 
625 aa  231  3e-59  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.776822 
 
 
-
 
NC_007912  Sde_2316  putative methyl-accepting chemotaxis sensory transducer  32.59 
 
 
548 aa  230  4e-59  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0208981 
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  37.03 
 
 
541 aa  230  6e-59  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_2757  methyl-accepting chemotaxis sensory transducer  31.07 
 
 
544 aa  228  2e-58  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_1776  histidine kinase, HAMP region: chemotaxis sensory transducer  30.47 
 
 
543 aa  228  3e-58  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.363817 
 
 
-
 
NC_012918  GM21_3709  methyl-accepting chemotaxis sensory transducer with Cache sensor  31.3 
 
 
546 aa  227  5.0000000000000005e-58  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009512  Pput_2828  methyl-accepting chemotaxis sensory transducer  33.62 
 
 
544 aa  226  9e-58  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  36.65 
 
 
541 aa  224  4e-57  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  36.11 
 
 
638 aa  223  4.9999999999999996e-57  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_008789  Hhal_0167  methyl-accepting chemotaxis sensory transducer  37.76 
 
 
540 aa  223  6e-57  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_3299  methyl-accepting chemotaxis sensory transducer  32.05 
 
 
554 aa  223  7e-57  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_3600  methyl-accepting chemotaxis sensory transducer  30.45 
 
 
546 aa  223  8e-57  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_0824  methyl-accepting chemotaxis sensory transducer  32.18 
 
 
554 aa  223  9e-57  Shewanella sp. MR-4  Bacteria  normal  hitchhiker  0.00067966 
 
 
-
 
NC_008322  Shewmr7_3199  methyl-accepting chemotaxis sensory transducer  32.18 
 
 
554 aa  222  9.999999999999999e-57  Shewanella sp. MR-7  Bacteria  normal  normal  0.927661 
 
 
-
 
NC_009438  Sputcn32_3200  methyl-accepting chemotaxis sensory transducer  35.89 
 
 
554 aa  221  3e-56  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  37.26 
 
 
564 aa  221  3e-56  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  41.27 
 
 
636 aa  221  3e-56  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_009831  Ssed_4404  methyl-accepting chemotaxis sensory transducer  34.88 
 
 
638 aa  220  3.9999999999999997e-56  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0156105 
 
 
-
 
NC_002947  PP_2861  methyl-accepting chemotaxis sensory transducer  31.15 
 
 
544 aa  220  5e-56  Pseudomonas putida KT2440  Bacteria  normal  normal  0.445183 
 
 
-
 
NC_004347  SO_0987  methyl-accepting chemotaxis protein  31.71 
 
 
554 aa  219  7.999999999999999e-56  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009997  Sbal195_3617  methyl-accepting chemotaxis sensory transducer  32.61 
 
 
554 aa  219  1e-55  Shewanella baltica OS195  Bacteria  normal  normal  0.964358 
 
 
-
 
NC_009439  Pmen_2174  methyl-accepting chemotaxis sensory transducer  30.95 
 
 
544 aa  218  1e-55  Pseudomonas mendocina ymp  Bacteria  normal  decreased coverage  0.00506259 
 
 
-
 
NC_009052  Sbal_0870  methyl-accepting chemotaxis sensory transducer  32.83 
 
 
554 aa  219  1e-55  Shewanella baltica OS155  Bacteria  normal  0.0571565  n/a   
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  36.39 
 
 
712 aa  219  1e-55  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_007912  Sde_0081  putative methyl-accepting chemotaxis sensory transducer  39.77 
 
 
544 aa  218  2e-55  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3494  methyl-accepting chemotaxis sensory transducer  32.55 
 
 
554 aa  218  2.9999999999999998e-55  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_3379  methyl-accepting chemotaxis protein  32.32 
 
 
559 aa  218  2.9999999999999998e-55  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3422  methyl-accepting chemotaxis sensory transducer with Cache sensor  35.71 
 
 
554 aa  218  2.9999999999999998e-55  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_4877  chemotactic transducer PctB  31.45 
 
 
629 aa  218  2.9999999999999998e-55  Pseudomonas aeruginosa PA7  Bacteria  normal  0.164155  n/a   
 
 
-
 
NC_007492  Pfl01_0124  chemotaxis sensory transducer, Cache sensor  41.46 
 
 
626 aa  217  4e-55  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.201174  normal 
 
 
-
 
NC_009439  Pmen_2650  methyl-accepting chemotaxis sensory transducer  36.57 
 
 
568 aa  217  4e-55  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  37.01 
 
 
637 aa  217  4e-55  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  36.5 
 
 
712 aa  217  4e-55  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_008463  PA14_56010  chemotactic transducer PctB  31.24 
 
 
629 aa  217  5e-55  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009457  VC0395_A2659  methyl-accepting chemotaxis protein  34.12 
 
 
556 aa  216  7e-55  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_2249  methyl-accepting chemotaxis transducer  34.1 
 
 
643 aa  216  8e-55  Pseudomonas putida KT2440  Bacteria  normal  0.477129  normal  0.786945 
 
 
-
 
NC_007492  Pfl01_0354  chemotaxis sensory transducer, Cache sensor  38.46 
 
 
630 aa  216  9.999999999999999e-55  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_3532  methyl-accepting chemotaxis sensory transducer  31.31 
 
 
555 aa  215  1.9999999999999998e-54  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_2920  methyl-accepting chemotaxis sensory transducer  31.69 
 
 
544 aa  215  1.9999999999999998e-54  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_013889  TK90_2562  methyl-accepting chemotaxis sensory transducer  37.43 
 
 
671 aa  214  1.9999999999999998e-54  Thioalkalivibrio sp. K90mix  Bacteria  normal  hitchhiker  0.0046581 
 
 
-
 
NC_008700  Sama_2880  putative methyl-accepting chemotaxis sensory transducer  35.62 
 
 
558 aa  214  1.9999999999999998e-54  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_1061  methyl-accepting chemotaxis protein  42.26 
 
 
626 aa  214  2.9999999999999995e-54  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.646209  n/a   
 
 
-
 
NC_009512  Pput_3489  methyl-accepting chemotaxis sensory transducer  32.84 
 
 
628 aa  214  2.9999999999999995e-54  Pseudomonas putida F1  Bacteria  normal  0.228387  normal 
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  37.39 
 
 
716 aa  213  4.9999999999999996e-54  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_009439  Pmen_2000  methyl-accepting chemotaxis sensory transducer  33.22 
 
 
560 aa  213  5.999999999999999e-54  Pseudomonas mendocina ymp  Bacteria  normal  0.0144557  normal  0.0324669 
 
 
-
 
NC_008463  PA14_56000  chemotactic transducer PctA  38.11 
 
 
629 aa  213  5.999999999999999e-54  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0512673  normal 
 
 
-
 
NC_007954  Sden_0099  chemotaxis sensory transducer  33.2 
 
 
639 aa  213  7e-54  Shewanella denitrificans OS217  Bacteria  unclonable  0.0000000152719  n/a   
 
 
-
 
NC_007005  Psyr_3534  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  34.32 
 
 
629 aa  213  9e-54  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.667463  normal  0.0882884 
 
 
-
 
NC_009438  Sputcn32_0619  methyl-accepting chemotaxis sensory transducer  41.49 
 
 
634 aa  212  1e-53  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_1880  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.49 
 
 
628 aa  212  2e-53  Pseudomonas putida GB-1  Bacteria  normal  0.454316  normal 
 
 
-
 
NC_007954  Sden_2955  chemotaxis sensory transducer  37.99 
 
 
497 aa  211  2e-53  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_4795  methyl-accepting chemotaxis sensory transducer  32.22 
 
 
638 aa  212  2e-53  Shewanella woodyi ATCC 51908  Bacteria  normal  0.884167  hitchhiker  0.000462611 
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  40.3 
 
 
637 aa  211  3e-53  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_010506  Swoo_3725  methyl-accepting chemotaxis sensory transducer  37.22 
 
 
620 aa  211  3e-53  Shewanella woodyi ATCC 51908  Bacteria  normal  0.403145  normal 
 
 
-
 
NC_008463  PA14_55960  chemotactic transducer PctC  36.99 
 
 
632 aa  211  3e-53  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.289325  normal 
 
 
-
 
NC_008345  Sfri_0080  methyl-accepting chemotaxis sensory transducer  34.58 
 
 
636 aa  211  4e-53  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_3768  chemotaxis sensory transducer  35.1 
 
 
560 aa  210  5e-53  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_0906  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  40.97 
 
 
626 aa  210  6e-53  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_013456  VEA_003896  methyl-accepting chemotaxis protein  38.33 
 
 
545 aa  209  1e-52  Vibrio sp. Ex25  Bacteria  decreased coverage  0.000288698  n/a   
 
 
-
 
NC_009656  PSPA7_4876  chemotactic transducer PctA  37.5 
 
 
629 aa  209  1e-52  Pseudomonas aeruginosa PA7  Bacteria  normal  0.647167  n/a   
 
 
-
 
NC_009831  Ssed_3256  methyl-accepting chemotaxis protein  37.17 
 
 
558 aa  209  1e-52  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_4874  chemotactic transducer PctC  37.04 
 
 
632 aa  209  1e-52  Pseudomonas aeruginosa PA7  Bacteria  normal  0.153332  n/a   
 
 
-
 
NC_010506  Swoo_3605  methyl-accepting chemotaxis sensory transducer  32.76 
 
 
666 aa  207  3e-52  Shewanella woodyi ATCC 51908  Bacteria  normal  0.644417  normal 
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  35.28 
 
 
713 aa  207  4e-52  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_010506  Swoo_0808  methyl-accepting chemotaxis sensory transducer  36.97 
 
 
541 aa  206  7e-52  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3491  methyl-accepting chemotaxis sensory transducer  36.02 
 
 
554 aa  205  1e-51  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3611  methyl-accepting chemotaxis sensory transducer  40.29 
 
 
634 aa  206  1e-51  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4431  chemotaxis sensory transducer, Cache sensor  37.89 
 
 
629 aa  206  1e-51  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009456  VC0395_1102  methyl-accepting chemotaxis protein  33.33 
 
 
638 aa  206  1e-51  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_3502  methyl-accepting chemotaxis sensory transducer  39.11 
 
 
620 aa  206  1e-51  Shewanella sediminis HAW-EB3  Bacteria  normal  0.666992  normal  0.2901 
 
 
-
 
NC_009092  Shew_0808  methyl-accepting chemotaxis sensory transducer  34.2 
 
 
554 aa  205  2e-51  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_011312  VSAL_I2130  methyl-accepting chemotaxis protein  38.57 
 
 
546 aa  204  2e-51  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.665531  n/a   
 
 
-
 
NC_004578  PSPTO_2480  methyl-accepting chemotaxis protein  38.18 
 
 
629 aa  204  3e-51  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_3666  methyl-accepting chemotaxis sensory transducer  30.92 
 
 
554 aa  204  3e-51  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_4352  methyl-accepting chemotaxis sensory transducer  37.58 
 
 
624 aa  204  3e-51  Pseudomonas putida F1  Bacteria  normal  normal  0.0132701 
 
 
-
 
NC_008321  Shewmr4_0271  methyl-accepting chemotaxis sensory transducer  33.56 
 
 
638 aa  204  3e-51  Shewanella sp. MR-4  Bacteria  normal  0.758035  hitchhiker  0.0000678809 
 
 
-
 
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