| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1653 |
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| Symbol | |
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| ID | 4603904 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2017088 |
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| End bp | 2018704 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639781016 |
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| Product | putative methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_927529 |
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| Protein GI | 119774789 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGCCT TCCTCAGAAA ATTCACCATC TTACAGCGTC TTATCATGAT GCTGGCGCTG
GCAGCCCTTG GCACCTTTTG CTTTGCGGCC TTTAATATCC AGGAACAGTA CAACAACCTT
GAGCAGCAAA AATGGCTGCA AAATGATGGC CAGTTGGATA CTGTGCTGTC GCTGGTAGAG
GTGCACAGGC AACAGGTGCA GCAGGGTCAA ATCAGCGAAG CAGATGCCAA GGCAGAAGTG
GCGAGTCTTA TCAATGCAGC TCATTACGGC AATGGTGGCT ACTTTATGGT GGTGGATGCT
GAGGGTCAGA TCCTCGCTGC CGGTGGCCAG TCGCAGAAAA TCGGTAGCCG TGTCAGCGAC
AAGTCTATCC TGAATCTGGT CAATGAAGCC CGCACCAAGG GCAAAGCGGT TGCCACAGTA
GAGACCCTTA ACCCGGACAC AGGCAAAACC GACACCCAGT TGGCTGAAGC ACGTCAATTT
GCCCCCTGGC AGTGGATTGT CATCACCGGT GCCTTTGTGG CCGATGTCAA TGCCGCCATG
GAAACCGCCA TCTGGAATAC CCTCATCATT ATGATGTTGA TTTCCACACC ACTGTTTGCC
CTCTTTATGG CGCTCAATCA TTCTATTACC TCGCCCCTTA ACCGTGCCAT TGAGGCGCTG
GAAGACATCG CCGACGGCGA AGGGGATCTG GGAGCGAGAC TGAGCACCGC AGGCAAAGAT
GAGGTAGCTC ACCTTGCCAA GGCCTTTAAT CGCTTCGCCG AAAAAATCGG TAAGTTAATT
AAAGACATCA AACCCATGGG CGATGAACTG ACCGATGATG CCCAGGCCCT GAGTCAGGCG
GTTGAAACCG CCAATCGCAG CAGTGAACAA ATCCATCGGG AGACTGAAAG CGTTGCCGCC
GCCATTCATC AAATGCTGGC CACGAGCCAG GAAATGGCCC ACAACACCCA GCAGGCTGCC
GATTCGGCTT CCAAGGTAAA GGGACAGGCT CAGGAGAGCC AGTCGCTGAT GACCAGCACG
CTGAAGCAAA CTGAATCCCT GGTAGACAAG CTGAAGGCGG CAGAGCTGAC TACGGCCCGA
CTTGGCGCCG CCTCAGGTCA GATTGGCAGC ATTCTCGATG TTATCCGCGC CATTGCCGAA
CAGACCAACC TGCTCGCCCT CAATGCCGCT ATTGAAGCGG CCCGTGCCGG CGCCCACGGT
CGCGGTTTTG CGGTTGTGGC CGATGAAGTG CGTGCCCTCG CCAACCGCAC CCAGCAGTCC
ACCAATGAAA TTCAAAAAAT TATCAGCGAA ATTCAGGCCG GTATCGGCGA TGTAACCGCC
TCCAACAGTG CCAATCAGAC ACTGTCTGAA TCGCTGCAGA GCCAGGCCCG TCAGGCAGGC
GCCTCCATGG ACGCCATCTT GTCGCTGGTC GCCCACATTA ACGACATCAA CACTCAGCTT
GCCAGTGCGA CTGAAGAGCA GTCGCTGGTG ACCGAAGAAA TCAATCGCAA CATCAGCAAT
ATTTCAGAGC AAATGCAGCT GGCGGTTGAG TCCAACGAAG GTAATCGACA TGCCGCAGGC
TCGCTGCAAT CCATCAGCCG GGCACTGGCC AAGGCCCTTG GGCATTTCAA GGTATAG
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| Protein sequence | MIAFLRKFTI LQRLIMMLAL AALGTFCFAA FNIQEQYNNL EQQKWLQNDG QLDTVLSLVE
VHRQQVQQGQ ISEADAKAEV ASLINAAHYG NGGYFMVVDA EGQILAAGGQ SQKIGSRVSD
KSILNLVNEA RTKGKAVATV ETLNPDTGKT DTQLAEARQF APWQWIVITG AFVADVNAAM
ETAIWNTLII MMLISTPLFA LFMALNHSIT SPLNRAIEAL EDIADGEGDL GARLSTAGKD
EVAHLAKAFN RFAEKIGKLI KDIKPMGDEL TDDAQALSQA VETANRSSEQ IHRETESVAA
AIHQMLATSQ EMAHNTQQAA DSASKVKGQA QESQSLMTST LKQTESLVDK LKAAELTTAR
LGAASGQIGS ILDVIRAIAE QTNLLALNAA IEAARAGAHG RGFAVVADEV RALANRTQQS
TNEIQKIISE IQAGIGDVTA SNSANQTLSE SLQSQARQAG ASMDAILSLV AHINDINTQL
ASATEEQSLV TEEINRNISN ISEQMQLAVE SNEGNRHAAG SLQSISRALA KALGHFKV
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