| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1770 |
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| Symbol | |
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| ID | 4277549 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2077358 |
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| End bp | 2078974 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638134554 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_750458 |
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| Protein GI | 114562945 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGGAT TATTAAGGCG TTTAACCATT TTAAAGCGCT TATTCATTAT GTTAGCTTTA
GCCGCTGTAG GCACTGTGGT TTTCGGTTCT TTTTCAATTA AAGAACAATA CGATCATTTA
ATCGAAGAAA AATATAAGCA GATAAGTGGG CAAGTCAGCC AATTAAGTAG CACTCTAGAT
GCGTTTAAAT TGGCCAAACC AGATGCTACG GTTGAAATAT TAAGCCAATT TGCCAGTAAA
ATTGAAGTTA ATGATCATCA AGCTTTTATC ATTGTTGATA ACCAAGACCG CATTATTGTT
AATCCATTAA ATCAAAACTC AGTCGGCAAG CCCCTCTCCA ATTTAGCAAC ATTCAACGGA
TCGAATTCAT ACCAACAGTT GTTCGCCAGC GCCAAAAAAA ATAACCTCGC ACAGGCTGAA
CTAGCTATTG TTGATCAACA AAATCGGCCA CAAACAGTAT TAGCAGTAGC GCAATATTAT
TCAGCCCTTG ATTGGACCTT AATCACTCAA GCTAACGTCA ACGATGTTAA TGAAAGCATG
ACGGGTATCA TTATTGACTA TTTTATTATC ATGATGATTA TTTCAGTGCC TATTTTTGGG
TTCTTTTTAT TGCTGAATCA TTCCATTACC CAACCTCTCA ACGTCACTAT CGATGCGATG
GAACAGATAG CCAAAGGTGA AGGTGACTTG ACCCAACGCT TGTCTACCGA AGGTAATGAT
GAAGTAGCCA AATTAGCAGA TGCATTCAAT CAGTTTGTGA TTAAAATTGC CAATATGGTG
GCTAATTTGC AACCGCTCGG GCATACCTTA AATAATGAAG CCATACATTT ATTAGACACC
GTAAAGTCAT CGAATCAAAG TGCGAATCAA GTGCATAGTG AAACTCAAAG TGTCGCCGCT
GCTATCAACC AGATGTTGTC GACTAGCCAA GAAATGGCAC GAAATACACA AGATGCAGCT
GACGGGGCCG CTAATGTAAA ACATCAAGCG GAGCAGAATC AAAAATTGAT GCAACAAACC
GTTGAACAAA CACAAAGTTT AGTCCACGAA TTACATCAAG CTGAAACCGT GTCATTAACA
CTGAGTCATT CATCAGCTGA GATTGGCAGT ATTCTTGATG TTATTGGCAG CATTGCAGAT
CAAACTAACC TGCTTGCGCT CAATGCCGCC ATTGAAGCTG CACGAGCCGG TGAACATGGT
CGAGGTTTTG CTGTCGTGGC AGATGAAGTA CGAGCTCTTG CGAATAGAAC TCAGTCATCG
ACTAATGAAA TCAATAAAAT TATTAGTCAG ATCCAAACGG GTATTCAATC GGTTATCGAC
AGCATTACTC ATACACAACG ACAATCTACT CAGTTACAGT CAAAAGCCGT ACAATCAAGC
GATGCGATTG TCGAAATTTT AGCGCTCATC GATAATATTA GCGGCATGAC AGCACAACTT
GCTAGTGCCA CTGAAGAACA AGCATTGGTT ACCGAAGACA TCAATGTCAA CGTCAATACC
ATTTCTGAAC TCACCGAACA GTCGTTAACA GCGAACGAAA CTCACAATCA GGCAGCGCAA
TCGTTGCAAG GCATTAGTGT TGATATGAGC AAAACTCTAG GGCAATTTAA AATATAG
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| Protein sequence | MIGLLRRLTI LKRLFIMLAL AAVGTVVFGS FSIKEQYDHL IEEKYKQISG QVSQLSSTLD
AFKLAKPDAT VEILSQFASK IEVNDHQAFI IVDNQDRIIV NPLNQNSVGK PLSNLATFNG
SNSYQQLFAS AKKNNLAQAE LAIVDQQNRP QTVLAVAQYY SALDWTLITQ ANVNDVNESM
TGIIIDYFII MMIISVPIFG FFLLLNHSIT QPLNVTIDAM EQIAKGEGDL TQRLSTEGND
EVAKLADAFN QFVIKIANMV ANLQPLGHTL NNEAIHLLDT VKSSNQSANQ VHSETQSVAA
AINQMLSTSQ EMARNTQDAA DGAANVKHQA EQNQKLMQQT VEQTQSLVHE LHQAETVSLT
LSHSSAEIGS ILDVIGSIAD QTNLLALNAA IEAARAGEHG RGFAVVADEV RALANRTQSS
TNEINKIISQ IQTGIQSVID SITHTQRQST QLQSKAVQSS DAIVEILALI DNISGMTAQL
ASATEEQALV TEDINVNVNT ISELTEQSLT ANETHNQAAQ SLQGISVDMS KTLGQFKI
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