Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_2194 |
Symbol | |
ID | 6116464 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 2686752 |
End bp | 2688389 |
Gene Length | 1638 bp |
Protein Length | 545 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641633702 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_001760571 |
Protein GI | 170726545 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00216283 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATAGCTT TATTACGTCG CTTCACCATA CTTCAACGAT TGATATTAAT GCTTGTTCTT GCTGCAATCG GTACGCTTTG TTTCGCCAGC TTTTCCATTA ATGAGCAACG TAATAATTTG ATAAAGCAAA AGTGGGTGCA AAATGACGCC CAGTTAGTCA CAGTACTGAG TATTATTGAC GCTCACCGAA AGCAGGTATC ACAGGGGAAA ATAACTCTTA AAGATGCAAA GGCTGAAGCC ACTCAACTAA TCAATGAAAT TGGGTTTGGC AAAGATGGTT ACTTTATCCT TATCGATGAA AACAGCAGTA TAATCTCCCA TGGTACCTCC CCTAACCTCA TCGGCCAACA CGCTAATAAG ATCCACTCTC AAAACAGCCA ACTCTCCCTT GCAGATATGG TCAGTGAAGC ACAAACAGCG ACGGTATCAA AACAAACATT TTTCATTGTT AACCCTCAGA CCAGAGCTAT TGAGGAGAAA TTAGTAGAAG CAAGATATTA CCCTGCCTGG GACTGGACCT TAGTGACAGG CTCTTACATG AGTGATATTA ATGAAGCAAC CTATGAGGTC GTACTAAATT ACCTCATTAT CATGGTACTG ATTTCGGCGC CCATCTTTGG TTTTTTCCTC ATACTTAACC ATTCCATCAG CGTTCCACTG AAAGAAGCGA TAGCGGCGAT GGAAGATATT GCCAAAGGTG AAGGTGATCT CACTAAACGC TTACCCACAG TAGGCAAAGA TGAAGTGGTC GATCTTGCCA TCGCTTTTAA CCTTTTTGTT GAAAAAATCA ACTTAATGGT CGGCCACCTC AAACCATTAG GTGACAGTTT AAATCAAGAT GCCAACCGAC TCCTCACCGC TGTTGAAGAG TCAAATGCCT GTGTTGACCA TCTGCATCAA GAGACAAGCA GCGTAGCAAC AGCCATCAAT GAGATGCTAT CTACGACTCA TGAGATGGCA AGCAATACTC AGCAAGCAGC CGATGCAGCC AATGGAGTTC AAACCCAGGC TCAACAAAGT AAATCGATGA TGGATCAAAC GTTAATCCAT ACAGAAAAGT TAGTAGACGA ACTCAAAAAC TCTGAGGTAA TCACTCACAA TTTGGGCCAA TCCTCTGATC AGATAGGCAG TATATTAGAT GTCATACGTG GCATTGCAGA GCAGACTAAC CTGCTCGCAC TTAACGCTGC CATTGAAGCG GCAAGAGCTG GCGCCCATGG TCGCGGTTTT GCCGTGGTTG CCGATGAGGT CCGTGCATTA GCGACTCGCA CACAGGAGTC GACTAATGAG ATCCAAAAGA TCATCTCAGA TATCCAATCA GGTGTCGCCT CGGTGATGAC CAGTAACTCA GATACACAAA GCAGATCTGT ACAGCTTCAA AACCAAACAA AAGAGGTAGG TAGCTCACTC GAGGACATTC TAGGTTTAAT TGCTCATATC AGTGATATGA ATACCCAGCT TGCCAGTGCC ACTGAGGAGC AATCATTAGT CACAGAGGAG ATAAATCGAA ACGTCTGTAG CATCACTGAG CTAACAGAGG TTAGCGTTAA AGCCAATGAG AGCAATAAGT CTGCGGCTAT CTCTTTGCAA GATCTAAGTG AGGACACTGC CAAGACTTTA GCTCAATTTA AAGTTTAA
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Protein sequence | MIALLRRFTI LQRLILMLVL AAIGTLCFAS FSINEQRNNL IKQKWVQNDA QLVTVLSIID AHRKQVSQGK ITLKDAKAEA TQLINEIGFG KDGYFILIDE NSSIISHGTS PNLIGQHANK IHSQNSQLSL ADMVSEAQTA TVSKQTFFIV NPQTRAIEEK LVEARYYPAW DWTLVTGSYM SDINEATYEV VLNYLIIMVL ISAPIFGFFL ILNHSISVPL KEAIAAMEDI AKGEGDLTKR LPTVGKDEVV DLAIAFNLFV EKINLMVGHL KPLGDSLNQD ANRLLTAVEE SNACVDHLHQ ETSSVATAIN EMLSTTHEMA SNTQQAADAA NGVQTQAQQS KSMMDQTLIH TEKLVDELKN SEVITHNLGQ SSDQIGSILD VIRGIAEQTN LLALNAAIEA ARAGAHGRGF AVVADEVRAL ATRTQESTNE IQKIISDIQS GVASVMTSNS DTQSRSVQLQ NQTKEVGSSL EDILGLIAHI SDMNTQLASA TEEQSLVTEE INRNVCSITE LTEVSVKANE SNKSAAISLQ DLSEDTAKTL AQFKV
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