| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1868 |
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| Symbol | |
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| ID | 4924327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2145832 |
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| End bp | 2147469 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640163436 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001093993 |
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| Protein GI | 127512796 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000255174 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTTGCGA TCCTCAGAAG GTTCACCATT CTACAGCGCC TCATCTTAAT GCTGGTGCTT
GCCGCCATAG GCACCTTTGT CTTCGCCAGC TTTTCGATCA ACGAGCAGCG CAACAACCTG
ATTAAGCAGA AATGGCTGCA AAACGACGCG CAGCTATCCA CGCTCCTGAG TGTGATCGAC
ACTCACTACC GCCAGAGCCA GCAAAATATC CTGACGCCAG AAGACGCCCA GCGAGAGGCG
GCGAATCTGG TCAATCAGAT CCAATATGGC GAGAGCGGCT ATTTCCTGCT GTTCGATGCA
GATCATACCC TGCTGGCCAA TGGTGCATCG CCTGACCAGC TCGGCATCAA GGCATCAAAG
CTCACCAGCC AGATGGGCGG CAACGCTTTA GATAAGTTAC TGGACAAGGC CATGGCCTCG
GGCATCGCCA AGGCCAGCAT GGAGATGAGA AACCCTATCA CAGGCGAGCA GGAAGAAGCC
CTGATGGAAG CCCGCACCTT CCCTGCCTGG CAGTGGACAC TGGTGACTAC CTCTTACATG
AGCGATGTCA ACGACACCAC CATCAGCGTG ATGTACAACT ATCTGGGGAT CATGTTGCTG
ATCTCTGTGC CTATCTTTGC CTTCTTCCTG ATCCTCAATC ACTCCATCAG CTCGCCGCTG
AATCAGGCTA TCGATGCGAT GAAAGATATT GCCGAGGGTG AAGGCGATCT GACCAAGCGC
CTGCCCACCC AAGGCAAAGA TGAAGTGGTG GCCCTCGCCA TCGCCTTCAA CAACTTCGTA
GGTAAGATCA ACAAGATGGT TGCCGATCTC CAACCGGTTG GACACGATCT CAACCAGGAC
GCCGACCGTT TATTTAATGC CGTTGCCGAA TCTAACGCCA GTGTCGATCA CCTGCATCAG
GAGACCAGTA GCGTCGCCAC CGCCATCAAT CAGATGCTCT CCACCACTCA TGAGATGGCC
AGCAGCACCC AGCAGGCAGC CGATGCCGCT AACAGCGTCA AGCAGCAGGC TCAGGACAGT
AAGCAGCAGA TGGACGGCAC GGTAGAGAAT ACCCATAAGT TGGTTCAGGA GCTGAAGAAT
GCCGAAGGCA TCACCCAGCA CCTTGGGGTG TCTTCCGAGC AGATCGGCAG CATATTGGAT
GTGATCCGCG GCATCGCCGA TCAGACCAAC CTGCTGGCGT TAAACGCCGC CATCGAGGCC
GCCCGCGCCG GCGCCCATGG CCGAGGCTTC GCCGTGGTGG CCGACGAGGT GCGCGCCCTG
GCCAATCGCA CCCAAGACTC CACCAACGAG ATCCAGAAGA TCATCACTGA TATTCAAAAT
GGCGTCGCCA ACGTGATGCA CAGCAACAGC GATACGCAGA CCCAATCGGT GGAGCTGCAG
CAGCAAGCCC AGGCCGTGGG TGAATCCCTC AACACCATCC TAGAGCTGAT CGCCCATATC
AGCGACATGA ACACCCAGCT AGCCAGCGCC ACCGAGGAGC AGTCCCTGGT GACCGAAGAG
ATCAACCGCA ACATCTGCAG CATCACTGAG CTGTCTGAGG TATCGGTCAA GGCCAACGAG
AGCAATCGCA TGGCCGCCGA GTCTCTGCGT CAAATCAGTC AGACCAGCGC CAAGATCTTG
GGTCAGTTCA AGGTTTAA
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| Protein sequence | MLAILRRFTI LQRLILMLVL AAIGTFVFAS FSINEQRNNL IKQKWLQNDA QLSTLLSVID
THYRQSQQNI LTPEDAQREA ANLVNQIQYG ESGYFLLFDA DHTLLANGAS PDQLGIKASK
LTSQMGGNAL DKLLDKAMAS GIAKASMEMR NPITGEQEEA LMEARTFPAW QWTLVTTSYM
SDVNDTTISV MYNYLGIMLL ISVPIFAFFL ILNHSISSPL NQAIDAMKDI AEGEGDLTKR
LPTQGKDEVV ALAIAFNNFV GKINKMVADL QPVGHDLNQD ADRLFNAVAE SNASVDHLHQ
ETSSVATAIN QMLSTTHEMA SSTQQAADAA NSVKQQAQDS KQQMDGTVEN THKLVQELKN
AEGITQHLGV SSEQIGSILD VIRGIADQTN LLALNAAIEA ARAGAHGRGF AVVADEVRAL
ANRTQDSTNE IQKIITDIQN GVANVMHSNS DTQTQSVELQ QQAQAVGESL NTILELIAHI
SDMNTQLASA TEEQSLVTEE INRNICSITE LSEVSVKANE SNRMAAESLR QISQTSAKIL
GQFKV
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