| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1880 |
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| Symbol | |
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| ID | 5869665 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 2116162 |
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| End bp | 2118048 |
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| Gene Length | 1887 bp |
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| Protein Length | 628 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641547002 |
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| Product | methyl-accepting chemotaxis sensory transducer with Cache sensor |
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| Protein accession | YP_001668119 |
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| Protein GI | 167032888 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.454316 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTGA AATTTCGCCA CAAGATCCTG CTCAGCGCCT GCGGCGTCGT GGTCCTGGCA
TTTGCCCTGT TCACGCTTTA CAACGACTAC CTGCAACGCA ACACCATCCG CCAGAACATC
GAAGCCTCGG TACAGCAGTC CGGTGCACTG ACTGCCAGCA GCGTGCAGAA CTGGATGAGC
GGGCGCATCC TGGTGCTGGA AAACCTGGCC CAGGACATCG GCCAGCAAGG CGCCGGCGAC
ACCCTGGCCG GGCTGATCGA GCAGCCGTCC TACACGCGTA ATTTCCTGTT CACCTACCTG
GGCCAGGCCA ACGGCGTATT CACCCAGCGC CCGGATACCC AGATGCCCGC CGGTTACGAC
CCGCGCCAGC GCCCCTGGTA TGGCGCCGCC GCCAGCGCCG GGCAAACCGT GCTGACCGCC
CCATACCAGG GTGCGGTCGG TGGCCTGATG GTAACCATCG CCACCCCGGT GAAGAGCAAG
AGCAATGGCG AACTGATCGG CGTGGTCGGC GGTGACGTGA CCCTCGATAC CCTGGTAGAA
ATCATCAACT CGGTCGACTT CGGTGGCATC GGTCACGCCT TCCTGGCCGA CGCCAACGGC
CAGGTGATCG TCAGCCCCAA CAAAGACCAG GTGATGAAGA ACCTCAAGGA CATCTACCCA
GGCAGCAACC TGCGGGTTGC CGCCGGCATG CAGGATGTCA CCCTCAACGG CCAGGACCGC
ATCATTTCGT TCGCCCCGGT GAACGGCCTG CCGTCGGCGC AGTGGTACAT CGGCCTGTCC
ATCGACAAGG ACAAAGCCTA CGCCGCGCTC AGCCAGTTCC GCACCTCGGC GATCATTGCC
ATGCTGATTG CCGTGGCCGC CATTGCCGGC CTGCTCGGCC TGCTGATCCC TGTGCTGATG
AGCCCGCTGA CCACCATGGG CCGCGCCATG CGTGACATCG CCGAAGGCGA AGGTGACCTT
ACCCGCCGCC TGGCCGTGCA GAACAAGGAT GAGTTCGGCG AACTGGCCAC CTCGTTCAAC
CGCTTTGTCG AGCGTATCCA TGCCTCGATC AGCGAAGTGT CCTCGGCCAC CCGCCTGGTG
CATGACCTGT CGGAGAAAGT GGTCAGTGCG TCCAATGCGT CTATCAGCGG CTCTGAAGAA
CAGAGCATGC GCACCAACAG TGTGGCTGCG GCCATCAACG AACTGGGCGC AGCCACCCAG
GAAATCGCCC GCAATGCCGC CGATGCTTCG CAACATGCCA GCGGTGCCAG CGAACAGGCG
CACGGTGGCC GTGAAGTGGT TGAAGAAGCC ATCAGCGCCA TGACGGCCCT GTCGCAGCGC
ATCAGCGAGT CGTGCGCGCA GATCGAAACG CTCAACGCCA GCACCGACGA AATCGGCAAG
ATACTCGACG TGATCAAGGG CATCTCGCAG CAGACCAACC TGCTGGCGCT GAACGCCGCC
ATCGAAGCGG CCCGTGCCGG TGAAGCCGGC CGTGGTTTTG CCGTGGTGGC CGACGAAGTG
CGTAACCTGG CGCACCGGAC CCAGGAATCG GCGGAAGAAA TCCACCGCAT GATCACCAGC
CTGCAGGTGG GCTCGCGCGA AGCGGTGCAC ACCATGAACA CCAGCCAGGT TTCCAGCGAG
CAGACCGTGC AGGTGGCCAA CCAGGCCGGC GAACGCCTGG CCAGCGTGAC CCAGCGTATT
GGCGAAATCG ATGGCATGAA CCAGTCGGTG GCCACGGCTA CTGAAGAGCA GACCGCCGTG
GTCGAGAGCC TTAACCTGGA CATTACCCAG ATCAACGCCC TGAACCAGCA AGGGGTGGAG
AACCTCAACG ACACCCTGCG CCATTGCGAT CAGCTGGCCC AGCAGGCCGG GCGCTTGAAA
CAGCTGGTAG GCAGCTTCAG GATCTAA
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| Protein sequence | MNLKFRHKIL LSACGVVVLA FALFTLYNDY LQRNTIRQNI EASVQQSGAL TASSVQNWMS
GRILVLENLA QDIGQQGAGD TLAGLIEQPS YTRNFLFTYL GQANGVFTQR PDTQMPAGYD
PRQRPWYGAA ASAGQTVLTA PYQGAVGGLM VTIATPVKSK SNGELIGVVG GDVTLDTLVE
IINSVDFGGI GHAFLADANG QVIVSPNKDQ VMKNLKDIYP GSNLRVAAGM QDVTLNGQDR
IISFAPVNGL PSAQWYIGLS IDKDKAYAAL SQFRTSAIIA MLIAVAAIAG LLGLLIPVLM
SPLTTMGRAM RDIAEGEGDL TRRLAVQNKD EFGELATSFN RFVERIHASI SEVSSATRLV
HDLSEKVVSA SNASISGSEE QSMRTNSVAA AINELGAATQ EIARNAADAS QHASGASEQA
HGGREVVEEA ISAMTALSQR ISESCAQIET LNASTDEIGK ILDVIKGISQ QTNLLALNAA
IEAARAGEAG RGFAVVADEV RNLAHRTQES AEEIHRMITS LQVGSREAVH TMNTSQVSSE
QTVQVANQAG ERLASVTQRI GEIDGMNQSV ATATEEQTAV VESLNLDITQ INALNQQGVE
NLNDTLRHCD QLAQQAGRLK QLVGSFRI
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