More than 300 homologs were found in PanDaTox collection
for query gene Pput_4352 on replicon NC_009512
Organism: Pseudomonas putida F1



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010501  PputW619_0425  methyl-accepting chemotaxis sensory transducer with Cache sensor  61.59 
 
 
630 aa  747    Pseudomonas putida W619  Bacteria  normal  0.461628  normal 
 
 
-
 
NC_002947  PP_1371  methyl-accepting chemotaxis transducer  99.2 
 
 
624 aa  1259    Pseudomonas putida KT2440  Bacteria  normal  normal  0.318672 
 
 
-
 
NC_002947  PP_2249  methyl-accepting chemotaxis transducer  61.33 
 
 
643 aa  759    Pseudomonas putida KT2440  Bacteria  normal  0.477129  normal  0.786945 
 
 
-
 
NC_009656  PSPA7_4874  chemotactic transducer PctC  62.5 
 
 
632 aa  791    Pseudomonas aeruginosa PA7  Bacteria  normal  0.153332  n/a   
 
 
-
 
NC_009656  PSPA7_4877  chemotactic transducer PctB  66.77 
 
 
629 aa  844    Pseudomonas aeruginosa PA7  Bacteria  normal  0.164155  n/a   
 
 
-
 
NC_009512  Pput_3489  methyl-accepting chemotaxis sensory transducer  61.46 
 
 
628 aa  759    Pseudomonas putida F1  Bacteria  normal  0.228387  normal 
 
 
-
 
NC_010501  PputW619_1723  methyl-accepting chemotaxis sensory transducer with Cache sensor  60.7 
 
 
626 aa  725    Pseudomonas putida W619  Bacteria  normal  0.372844  normal 
 
 
-
 
NC_004578  PSPTO_1061  methyl-accepting chemotaxis protein  60.06 
 
 
626 aa  721    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.646209  n/a   
 
 
-
 
NC_004578  PSPTO_2480  methyl-accepting chemotaxis protein  59.55 
 
 
629 aa  722    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_1011  methyl-accepting chemotaxis sensory transducer with Cache sensor  93.75 
 
 
624 aa  1145    Pseudomonas putida W619  Bacteria  normal  0.752503  hitchhiker  0.0000000000251926 
 
 
-
 
NC_007005  Psyr_0906  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  59.68 
 
 
626 aa  719    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_1880  methyl-accepting chemotaxis sensory transducer with Cache sensor  61.31 
 
 
628 aa  756    Pseudomonas putida GB-1  Bacteria  normal  0.454316  normal 
 
 
-
 
NC_007005  Psyr_2246  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  60.67 
 
 
629 aa  714    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.265681  normal  0.412954 
 
 
-
 
NC_007005  Psyr_3534  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  63.75 
 
 
629 aa  775    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.667463  normal  0.0882884 
 
 
-
 
NC_009512  Pput_4352  methyl-accepting chemotaxis sensory transducer  100 
 
 
624 aa  1268    Pseudomonas putida F1  Bacteria  normal  normal  0.0132701 
 
 
-
 
NC_009656  PSPA7_4876  chemotactic transducer PctA  68.36 
 
 
629 aa  850    Pseudomonas aeruginosa PA7  Bacteria  normal  0.647167  n/a   
 
 
-
 
NC_007492  Pfl01_0124  chemotaxis sensory transducer, Cache sensor  60.38 
 
 
626 aa  744    Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.201174  normal 
 
 
-
 
NC_007492  Pfl01_0354  chemotaxis sensory transducer, Cache sensor  65.29 
 
 
630 aa  795    Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4431  chemotaxis sensory transducer, Cache sensor  75.04 
 
 
629 aa  920    Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_3309  methyl-accepting chemotaxis sensory transducer  70.45 
 
 
625 aa  875    Pseudomonas mendocina ymp  Bacteria  normal  normal  0.776822 
 
 
-
 
NC_010322  PputGB1_4443  methyl-accepting chemotaxis sensory transducer with Cache sensor  98.4 
 
 
624 aa  1249    Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  0.0000033578 
 
 
-
 
NC_008463  PA14_55960  chemotactic transducer PctC  62.97 
 
 
632 aa  799    Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.289325  normal 
 
 
-
 
NC_008463  PA14_56000  chemotactic transducer PctA  68.2 
 
 
629 aa  849    Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0512673  normal 
 
 
-
 
NC_008463  PA14_56010  chemotactic transducer PctB  66.61 
 
 
629 aa  843    Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_2154  methyl-accepting chemotaxis sensory transducer  36.36 
 
 
627 aa  374  1e-102  Pseudomonas mendocina ymp  Bacteria  normal  0.0789614  normal  0.507372 
 
 
-
 
NC_009654  Mmwyl1_1586  methyl-accepting chemotaxis sensory transducer  35.39 
 
 
626 aa  357  5e-97  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_013457  VEA_001423  methyl-accepting chemotaxis protein  32.48 
 
 
623 aa  324  3e-87  Vibrio sp. Ex25  Bacteria  normal  0.896179  n/a   
 
 
-
 
NC_009784  VIBHAR_06314  histidine kinase  33.11 
 
 
623 aa  318  1e-85  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009457  VC0395_A1741  methyl-accepting chemotaxis protein  35.56 
 
 
623 aa  318  2e-85  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_0988  methyl-accepting chemotaxis protein  31.47 
 
 
695 aa  315  1.9999999999999998e-84  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0316  methyl-accepting chemotaxis protein  33.06 
 
 
652 aa  313  7.999999999999999e-84  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_2364  methyl-accepting chemotaxis sensory transducer  33.39 
 
 
622 aa  313  9e-84  Shewanella baltica OS155  Bacteria  normal  0.493821  n/a   
 
 
-
 
NC_009438  Sputcn32_2121  methyl-accepting chemotaxis sensory transducer  34.03 
 
 
622 aa  312  1e-83  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_0895  methyl-accepting chemotaxis sensory transducer  33.39 
 
 
630 aa  310  4e-83  Shewanella sp. ANA-3  Bacteria  normal  normal  0.174985 
 
 
-
 
NC_011663  Sbal223_3405  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.8 
 
 
630 aa  308  2.0000000000000002e-82  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0882  methyl-accepting chemotaxis sensory transducer  33.8 
 
 
630 aa  308  2.0000000000000002e-82  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3603  methyl-accepting chemotaxis sensory transducer  33.23 
 
 
630 aa  305  1.0000000000000001e-81  Shewanella baltica OS195  Bacteria  normal  0.840663  normal 
 
 
-
 
NC_008321  Shewmr4_3042  methyl-accepting chemotaxis sensory transducer  33.07 
 
 
630 aa  305  1.0000000000000001e-81  Shewanella sp. MR-4  Bacteria  normal  normal  0.397129 
 
 
-
 
NC_008322  Shewmr7_0930  methyl-accepting chemotaxis sensory transducer  33.07 
 
 
630 aa  305  1.0000000000000001e-81  Shewanella sp. MR-7  Bacteria  normal  normal  0.257402 
 
 
-
 
NC_010506  Swoo_4795  methyl-accepting chemotaxis sensory transducer  35.26 
 
 
638 aa  305  2.0000000000000002e-81  Shewanella woodyi ATCC 51908  Bacteria  normal  0.884167  hitchhiker  0.000462611 
 
 
-
 
NC_009665  Shew185_3480  methyl-accepting chemotaxis sensory transducer  33.23 
 
 
630 aa  305  2.0000000000000002e-81  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0085  methyl-accepting chemotaxis sensory transducer  35.15 
 
 
638 aa  305  2.0000000000000002e-81  Shewanella loihica PV-4  Bacteria  normal  0.0647334  normal 
 
 
-
 
NC_009831  Ssed_3477  putative methyl-accepting chemotaxis protein  32.46 
 
 
622 aa  301  2e-80  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.000522984 
 
 
-
 
NC_009783  VIBHAR_00119  methyl-accepting chemotaxis protein  36.01 
 
 
626 aa  299  1e-79  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_004347  SO_1056  methyl-accepting chemotaxis protein  32.28 
 
 
630 aa  298  2e-79  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007954  Sden_0099  chemotaxis sensory transducer  34.48 
 
 
639 aa  295  2e-78  Shewanella denitrificans OS217  Bacteria  unclonable  0.0000000152719  n/a   
 
 
-
 
NC_009831  Ssed_4404  methyl-accepting chemotaxis sensory transducer  35.3 
 
 
638 aa  295  2e-78  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0156105 
 
 
-
 
NC_012918  GM21_0525  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.78 
 
 
632 aa  294  3e-78  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_008345  Sfri_0080  methyl-accepting chemotaxis sensory transducer  33.69 
 
 
636 aa  293  5e-78  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_0194  methyl-accepting chemotaxis sensory transducer  32.65 
 
 
623 aa  291  2e-77  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_3491  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.18 
 
 
626 aa  290  6e-77  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_3950  methyl-accepting chemotaxis sensory transducer  31.37 
 
 
623 aa  288  2.9999999999999996e-76  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3825  methyl-accepting chemotaxis sensory transducer  31.21 
 
 
623 aa  287  5e-76  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_4029  methyl-accepting chemotaxis sensory transducer  32.29 
 
 
630 aa  286  7e-76  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_4557  methyl-accepting chemotaxis protein  31.53 
 
 
623 aa  285  2.0000000000000002e-75  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008321  Shewmr4_3752  methyl-accepting chemotaxis sensory transducer  31.49 
 
 
623 aa  283  9e-75  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_0252  methyl-accepting chemotaxis sensory transducer with Cache sensor  31.28 
 
 
623 aa  281  3e-74  Shewanella woodyi ATCC 51908  Bacteria  normal  0.866394  normal 
 
 
-
 
NC_009997  Sbal195_4274  methyl-accepting chemotaxis sensory transducer with Cache sensor  30.89 
 
 
623 aa  279  1e-73  Shewanella baltica OS195  Bacteria  normal  normal  0.179842 
 
 
-
 
NC_009052  Sbal_0193  methyl-accepting chemotaxis sensory transducer  31.05 
 
 
623 aa  279  1e-73  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0194  methyl-accepting chemotaxis sensory transducer with Cache sensor  30.89 
 
 
623 aa  279  1e-73  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_4141  methyl-accepting chemotaxis sensory transducer  30.89 
 
 
623 aa  279  1e-73  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_3017  methyl-accepting chemotaxis sensory transducer  31.81 
 
 
630 aa  278  2e-73  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0969  methyl-accepting chemotaxis sensory transducer  31.33 
 
 
631 aa  278  2e-73  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_3522  putative methyl-accepting chemotaxis sensory transducer  39.27 
 
 
636 aa  278  3e-73  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_009783  VIBHAR_01884  hypothetical protein  35.21 
 
 
627 aa  277  5e-73  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013457  VEA_001273  methyl-accepting chemotaxis protein  38.26 
 
 
638 aa  275  1.0000000000000001e-72  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_0323  methyl-accepting chemotaxis sensory transducer  30.73 
 
 
623 aa  273  9e-72  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_3307  methyl-accepting chemotaxis sensory transducer with Cache sensor  31.55 
 
 
596 aa  272  1e-71  Pectobacterium wasabiae WPP163  Bacteria  normal  0.298951  n/a   
 
 
-
 
NC_009457  VC0395_A0908  methyl-accepting chemotaxis protein  32.06 
 
 
633 aa  270  4e-71  Vibrio cholerae O395  Bacteria  hitchhiker  0.00000172893  n/a   
 
 
-
 
NC_009901  Spea_3492  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.21 
 
 
626 aa  270  5e-71  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_4454  methyl-accepting chemotaxis protein  40.13 
 
 
642 aa  270  7e-71  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008321  Shewmr4_0271  methyl-accepting chemotaxis sensory transducer  39.62 
 
 
638 aa  268  2e-70  Shewanella sp. MR-4  Bacteria  normal  0.758035  hitchhiker  0.0000678809 
 
 
-
 
NC_008322  Shewmr7_3750  methyl-accepting chemotaxis sensory transducer  39.62 
 
 
638 aa  268  2e-70  Shewanella sp. MR-7  Bacteria  normal  0.666265  normal  0.186245 
 
 
-
 
NC_008577  Shewana3_0272  methyl-accepting chemotaxis sensory transducer  39.41 
 
 
638 aa  268  2.9999999999999995e-70  Shewanella sp. ANA-3  Bacteria  decreased coverage  0.00090491  hitchhiker  0.000000349734 
 
 
-
 
NC_009901  Spea_1629  methyl-accepting chemotaxis sensory transducer with Cache sensor  30.6 
 
 
623 aa  267  4e-70  Shewanella pealeana ATCC 700345  Bacteria  normal  0.438395  n/a   
 
 
-
 
NC_013456  VEA_003139  methyl-accepting chemotaxis protein  33.85 
 
 
627 aa  267  5.999999999999999e-70  Vibrio sp. Ex25  Bacteria  normal  0.116124  n/a   
 
 
-
 
NC_009654  Mmwyl1_1383  methyl-accepting chemotaxis sensory transducer  33.21 
 
 
636 aa  266  7e-70  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.00353653  normal  0.775857 
 
 
-
 
NC_004578  PSPTO_3379  methyl-accepting chemotaxis protein  36.21 
 
 
559 aa  266  7e-70  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0173  methyl-accepting chemotaxis protein  33.15 
 
 
639 aa  266  1e-69  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_05150  adenylyl cyclase class-3/4/guanylyl cyclase  36.62 
 
 
650 aa  264  3e-69  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009052  Sbal_0282  methyl-accepting chemotaxis sensory transducer  39.53 
 
 
641 aa  263  8.999999999999999e-69  Shewanella baltica OS155  Bacteria  normal  0.0149105  n/a   
 
 
-
 
NC_009438  Sputcn32_0387  methyl-accepting chemotaxis sensory transducer  39.92 
 
 
638 aa  262  1e-68  Shewanella putrefaciens CN-32  Bacteria  normal  0.408395  n/a   
 
 
-
 
NC_009665  Shew185_0275  methyl-accepting chemotaxis sensory transducer  39.53 
 
 
638 aa  262  1e-68  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0279  methyl-accepting chemotaxis sensory transducer  39.53 
 
 
638 aa  263  1e-68  Shewanella baltica OS223  Bacteria  normal  0.983838  normal 
 
 
-
 
NC_009997  Sbal195_0283  methyl-accepting chemotaxis sensory transducer  39.53 
 
 
638 aa  262  1e-68  Shewanella baltica OS195  Bacteria  normal  0.411591  normal 
 
 
-
 
NC_012917  PC1_1003  methyl-accepting chemotaxis sensory transducer with Cache sensor  30.02 
 
 
596 aa  261  2e-68  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_3856  methyl-accepting chemotaxis sensory transducer  35.84 
 
 
640 aa  258  2e-67  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.825575 
 
 
-
 
NC_012912  Dd1591_3111  methyl-accepting chemotaxis sensory transducer with Cache sensor  28.28 
 
 
596 aa  257  5e-67  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3449  methyl-accepting chemotaxis sensory transducer  31.19 
 
 
632 aa  256  1.0000000000000001e-66  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A0365  accessory colonization factor AcfB  32.5 
 
 
626 aa  255  2.0000000000000002e-66  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_001073  N-acetylglucosamine regulated methyl-accepting chemotaxis protein  29.94 
 
 
628 aa  255  2.0000000000000002e-66  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0237  methyl-accepting chemotaxis sensory transducer  28.66 
 
 
632 aa  255  2.0000000000000002e-66  Shewanella loihica PV-4  Bacteria  normal  normal  0.997473 
 
 
-
 
NC_009456  VC0395_1102  methyl-accepting chemotaxis protein  35.57 
 
 
638 aa  254  2.0000000000000002e-66  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_010086  Bmul_4247  methyl-accepting chemotaxis sensory transducer with Cache sensor  29.69 
 
 
599 aa  254  4.0000000000000004e-66  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_0712  methyl-accepting chemotaxis sensory transducer with Cache sensor  30.5 
 
 
627 aa  254  4.0000000000000004e-66  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0412159  hitchhiker  0.0000400753 
 
 
-
 
NC_009636  Smed_0489  methyl-accepting chemotaxis sensory transducer  38.05 
 
 
698 aa  253  9.000000000000001e-66  Sinorhizobium medicae WSM419  Bacteria  decreased coverage  0.000832175  normal 
 
 
-
 
NC_011312  VSAL_I0799  methyl-accepting chemotaxis protein  30.8 
 
 
624 aa  252  1e-65  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_0320  methyl-accepting chemotaxis sensory transducer  32.61 
 
 
645 aa  248  2e-64  Pseudomonas putida KT2440  Bacteria  normal  decreased coverage  0.0000409011 
 
 
-
 
NC_009512  Pput_0342  methyl-accepting chemotaxis sensory transducer  32.61 
 
 
645 aa  248  2e-64  Pseudomonas putida F1  Bacteria  normal  0.860801  normal 
 
 
-
 
NC_010322  PputGB1_0343  methyl-accepting chemotaxis sensory transducer  32.62 
 
 
645 aa  248  2e-64  Pseudomonas putida GB-1  Bacteria  normal  0.675969  normal 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>