| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0489 |
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| Symbol | |
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| ID | 5321323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 531702 |
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| End bp | 533798 |
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| Gene Length | 2097 bp |
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| Protein Length | 698 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640789424 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001326181 |
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| Protein GI | 150395714 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000832175 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCCAAAC GATCGAATCT CATGACGCGC ATTCTCGTTG CCGCGTCCTG CGTCGTCGTC
GGCGCCTTTG CCGGCTTCTC CGTCTATATC GATAGTCTCC AGCGCGCCAC GACCACGAAA
GCCGTCGAGG AGGACATCGC TTCGTCCGGT CACCAGGCAG CGCAGAGCGT CGCCAACTGG
TTGAACGGCC GCGTGACGCT GACCGCCATG GCGGCAGACG CCGCAGGACG CGTCGCAGAT
GAAGCCGCCA TCCAGGGAGT GCTGAAGAAC GACGTCCTGA TCGGCGAGTT TATTTCGACC
TATGTCGGCA ATGAGAGCGG CAAATTCATA ACGTGGCCGG AATCGGAGAT GCCCGAAGGA
TACGACCCGC GCCAGCGCCC CTGGTACCAG CAGGCGGTTA AGGCCGATGC CCGCGTACTC
ACCGAGCCCT ATGTCGACGC TTCCAGCGGC GACCTGATCA TCAGTGCCGC GGTGCCGGTC
AGGCACGAGG GCAGGCTTTA TGGCGTCACC GGCAGCGATT TCTCGCTGAA AGCACTCGTC
ACCATGGTCA ACGGCATCGA TGTTGGCGGC GAAGGCTTTG CCTTTCTCGC AAACAGGGAC
GGGCAGATCC TGGTTCATCC GAATTCGAAG CTGGTGACGA AGACGCTTAC GGACGCCTTT
CCGGTCGACA CGCCGGCGAT CGGCAGCGGC ATCATGCAAA CGGAGCTGGA CGGCAAGCCG
ATGCTTGTGA GTTTTGTGCC GGTGAAGGGT CTTCCGTCGG TTGAATGGTA TGTCGGTTTC
GCGCTTGACG CGGATGTCGC CTATTCGGCG ATCAGCCAGT TCCGCGTGGC CGCGACCATA
GCCACCATCC TGGCGGTCGG CGCCATGATA GCCTTTTTGG CTACGCTGCT GAGCCGTCTG
GTGATACGGC CGGTAACCGA CATGACCGGC GCCATGGAGA AGCTTGCCGC CGGCAATCTC
GAGATAGCAA TCCCGGGCGA GGAGCGGCGC GACCAGATCG GTTCAATGGC AGCCGCCGTC
GCGGTTTTCC GTGCCAATGC GGTCGAGCGC AGGCGCCTCG AAGACGAGGC GGATGCCAAC
CGTTCGATGT CGGAACGCGA ACGTCTCGAG CACGAGGCGC AGAAGACGCG CGACGCCGCC
GAGGTTCAGC ACGCGGTCGA TGCGTTGGCG ACGGGTCTCG GAAGGTTGGC GGATGGCGAT
CTCGCCTATC GGATCGGCAA TCCCTTTGCC GATCGCCTGG ATCGCCTCCG GGAAGATTTC
AACAATTCTG TTGCCAAGTT GCATGACACG CTTTGTGCCG TCGGCACGAA CGCGCGCGCG
ATCGATGCAG GTGCAAGCGA AATTCGCTCG GCCGCCGACG ATCTTGCCCG CCGCACTGAA
CAACAGGCGG CATCCGTTGA AGAAACAGCG GCTGCCCTCG AAGAGATCAC CACCACGGTC
CGCGATTCCG CCCACCGGGC CGAGGAAGTC GGTGCGCTGG TCGCCCGCAC CCGTGCCGGC
GCGGAGAAGT CCGGCGAAGT GGTGCAGAAT GCCGTCATGG CCATGCACGC CATCGAGAAG
TCATCCGGCG AAATCTCGAA CATCATCGGC GTCATCGATG ACATCGCCTT CCAGACGAAT
CTCCTGGCGC TGAATGCCGG CGTCGAAGCG GCACGAGCCG GCGAGGCCGG CAAGGGTTTC
GCCGTCGTTG CCCAGGAAGT CCGCGAACTG GCCCAACGCT CGGCCAATGC CGCCAAGGAA
ATCAAGGCGC TGATCACCAC CTCCGGAGAG CAGGTGCAAT CCGGCGTGAC GCTGGTCGGC
GATACCGGGA GGGCGCTGCA GGCGATCGTC GCCGAAGTGC AGGAGATCAA CAAGCATGTG
AGTGCGATTG TCACGGCGAC TCGCGAACAG TCGACCGGTC TCCAGGAGAT CAACACGGCC
GTCAACACCA TGGACCAGGG CACGCAGCAA AATGCCGCCA TGGTCGAACA GCAGACGGCC
GCAAGCCACG GCCTTGCTTC GGAAGCCGCG GCGCTCAATT CGCTTCTTGC GCAGTTCAGA
CTGGGTGAGG CGCAAACGGC CTCTTACCCG GCCACGAATC GCCGGCGCGC AGCCTGA
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| Protein sequence | MSKRSNLMTR ILVAASCVVV GAFAGFSVYI DSLQRATTTK AVEEDIASSG HQAAQSVANW
LNGRVTLTAM AADAAGRVAD EAAIQGVLKN DVLIGEFIST YVGNESGKFI TWPESEMPEG
YDPRQRPWYQ QAVKADARVL TEPYVDASSG DLIISAAVPV RHEGRLYGVT GSDFSLKALV
TMVNGIDVGG EGFAFLANRD GQILVHPNSK LVTKTLTDAF PVDTPAIGSG IMQTELDGKP
MLVSFVPVKG LPSVEWYVGF ALDADVAYSA ISQFRVAATI ATILAVGAMI AFLATLLSRL
VIRPVTDMTG AMEKLAAGNL EIAIPGEERR DQIGSMAAAV AVFRANAVER RRLEDEADAN
RSMSERERLE HEAQKTRDAA EVQHAVDALA TGLGRLADGD LAYRIGNPFA DRLDRLREDF
NNSVAKLHDT LCAVGTNARA IDAGASEIRS AADDLARRTE QQAASVEETA AALEEITTTV
RDSAHRAEEV GALVARTRAG AEKSGEVVQN AVMAMHAIEK SSGEISNIIG VIDDIAFQTN
LLALNAGVEA ARAGEAGKGF AVVAQEVREL AQRSANAAKE IKALITTSGE QVQSGVTLVG
DTGRALQAIV AEVQEINKHV SAIVTATREQ STGLQEINTA VNTMDQGTQQ NAAMVEQQTA
ASHGLASEAA ALNSLLAQFR LGEAQTASYP ATNRRRAA
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