Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2121 |
Symbol | |
ID | 5078326 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 2438150 |
End bp | 2440018 |
Gene Length | 1869 bp |
Protein Length | 622 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640499283 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_001183641 |
Protein GI | 146293217 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGTTCA GTCATAAGAT TGTCGCCGCA TCCTCTGCGT TACTTTTAGT GACAGTAACG CTACTCACAA TAAAACAATA CTACTCCATC CAGAAGGAAA TGCAGGCACA AGTCGAAGCC AGTGTCACTG AAATCGTTGA TGGTGTAAGA AACACTGTTT CATCGGAAAT AGAAGCACGT AAACAACTGG CAGCTTATAC CACTAGCTTG ATAGAGCAAG ATCTCACCCC AGCCCACATC AGTAGCGTTA TTACGCGTCC CACGGTCAAA AATGCATTTT TGCTTATCGG TTTCGGATAC GAAAAGGATG GCACTAATAT TAATAATAAT CCGAGTTGGG ATCCCGGCGC AGGATGGGAT CCAAGGGCGA GACCTTGGTA TAAAGATGCA AAACAAGCCG ATAAATTGAT CATCACAGCA CCCTATCCTG ACTCTGCCTC CGGTGAAATT CTTGTCTCTA TCGCAACCCC CGTAAAAGAG AGCGGTCAAT TTATTGGGGC AATTTTTTAT GATGTTAGCC TTGTTGGATT AGCAACATTA GTCAATGAGG TGAAGCTATT CAACGCTGGA TATGTGTTTA TTGTTGCACA GGATGGAACG ACAATCGCCC ACCCAGAAGA AAAGAGAAAT GGTACTCCAA TGGCTGACTA TCTGCCTAAC ATCAAAGTGA TGGAACAACC TCAAAAAGTG AGTATTGACG GTAAAAACTT CACCTTAGAT TTCTCTAAAG TGGCAGGAGA AAACTGGTAT GTCGGCGTTA TCTTAGATGA AGATATTGCC TATGCCGCCG TAACCGATTT ACGCAATAGC TCTATTCTCT ATACGGTTAT CGCTTTACTT ATCAGTATTA CTGTACTTCT CCTACTCATC ACAACTTTGA TGCGCCCATT GCAAACCTTG AATGATGCGA TTCAAGATGT CGCTTCTGGA GAAGGTGATT TGACCCAACG TTTGAATACA AAAACCGATA CTGAGTTTTC ATCTTTAGCC ATTAGTTTCA ATACCTTCAC TGCTAATCTT CAACAACTTA TTATTGAATC TAAATCGATT GGTCGACTCA TCCATCAGAG TTCAGAAATG ACATCGGTAG AGTTACAACA ATCAACTGAT GCAATGAACT CGCAGCTACA TGAACTCGAA CAACTTGCCA CCGCAATGCA TGAAATGGCA ACGACCTCAA CAGATGTCGC ACGCAATGCT CAGGGTGCAG CCTCTGCGGC CAAAGAAGCA GACGACGCCA CCAGTGCAGG AACTCGCGTC GTTAGCGATA CAACGAAGGC GATTAATGCC TTATCCTCCG AAATCGATAT GGCAGTATCT GAAGTCAAAA TCTTAGGATC TGCGACAGAT AATATTGCGA CTATCTTAAA AGTCATTAAC GATATCGCAG ATCAAACCAA TTTGTTGGCC TTAAATGCGG CAATTGAAGC TGCAAGGGCG GGAGATTCAG GGCGTGGCTT TGCCGTTGTA GCCGATGAAG TCAGAACTCT CGCGCAAAAA ACACAGCAAT CGACAACACA AATCCGCAAT ATGATAGAAC AACTTCAGCA AGGAGCCCGA GCCGTGGCAG AAGTGATGCA CCAAAGTAAG GAAACCGCAA AAGATGCCGT TACCCGCGCC CAAGATGCTA ACACTGCACT CGATAAGATC CGTGAAGCCA TATTACAAAT CACAGACATG AACCTACAAA TTGCTTCTGC GGCTGAAGAA CAAAGTCTCG TTGCCGAAGA AATAAACAGT AATACAATTA GGATCAAAGA TTTATCTGTC CAAGTTTCAG ACACGGCCAT TCGTGCTAAC TCGGCGATGT ATACACAAAC GCAACATATC AAAGAACAAG ACGCAATCCT GAATAAATTT ATCGTCTAA
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Protein sequence | MKFSHKIVAA SSALLLVTVT LLTIKQYYSI QKEMQAQVEA SVTEIVDGVR NTVSSEIEAR KQLAAYTTSL IEQDLTPAHI SSVITRPTVK NAFLLIGFGY EKDGTNINNN PSWDPGAGWD PRARPWYKDA KQADKLIITA PYPDSASGEI LVSIATPVKE SGQFIGAIFY DVSLVGLATL VNEVKLFNAG YVFIVAQDGT TIAHPEEKRN GTPMADYLPN IKVMEQPQKV SIDGKNFTLD FSKVAGENWY VGVILDEDIA YAAVTDLRNS SILYTVIALL ISITVLLLLI TTLMRPLQTL NDAIQDVASG EGDLTQRLNT KTDTEFSSLA ISFNTFTANL QQLIIESKSI GRLIHQSSEM TSVELQQSTD AMNSQLHELE QLATAMHEMA TTSTDVARNA QGAASAAKEA DDATSAGTRV VSDTTKAINA LSSEIDMAVS EVKILGSATD NIATILKVIN DIADQTNLLA LNAAIEAARA GDSGRGFAVV ADEVRTLAQK TQQSTTQIRN MIEQLQQGAR AVAEVMHQSK ETAKDAVTRA QDANTALDKI REAILQITDM NLQIASAAEE QSLVAEEINS NTIRIKDLSV QVSDTAIRAN SAMYTQTQHI KEQDAILNKF IV
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