Gene Sputcn32_2121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2121 
Symbol 
ID5078326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp2438150 
End bp2440018 
Gene Length1869 bp 
Protein Length622 aa 
Translation table11 
GC content43% 
IMG OID640499283 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_001183641 
Protein GI146293217 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTTCA GTCATAAGAT TGTCGCCGCA TCCTCTGCGT TACTTTTAGT GACAGTAACG 
CTACTCACAA TAAAACAATA CTACTCCATC CAGAAGGAAA TGCAGGCACA AGTCGAAGCC
AGTGTCACTG AAATCGTTGA TGGTGTAAGA AACACTGTTT CATCGGAAAT AGAAGCACGT
AAACAACTGG CAGCTTATAC CACTAGCTTG ATAGAGCAAG ATCTCACCCC AGCCCACATC
AGTAGCGTTA TTACGCGTCC CACGGTCAAA AATGCATTTT TGCTTATCGG TTTCGGATAC
GAAAAGGATG GCACTAATAT TAATAATAAT CCGAGTTGGG ATCCCGGCGC AGGATGGGAT
CCAAGGGCGA GACCTTGGTA TAAAGATGCA AAACAAGCCG ATAAATTGAT CATCACAGCA
CCCTATCCTG ACTCTGCCTC CGGTGAAATT CTTGTCTCTA TCGCAACCCC CGTAAAAGAG
AGCGGTCAAT TTATTGGGGC AATTTTTTAT GATGTTAGCC TTGTTGGATT AGCAACATTA
GTCAATGAGG TGAAGCTATT CAACGCTGGA TATGTGTTTA TTGTTGCACA GGATGGAACG
ACAATCGCCC ACCCAGAAGA AAAGAGAAAT GGTACTCCAA TGGCTGACTA TCTGCCTAAC
ATCAAAGTGA TGGAACAACC TCAAAAAGTG AGTATTGACG GTAAAAACTT CACCTTAGAT
TTCTCTAAAG TGGCAGGAGA AAACTGGTAT GTCGGCGTTA TCTTAGATGA AGATATTGCC
TATGCCGCCG TAACCGATTT ACGCAATAGC TCTATTCTCT ATACGGTTAT CGCTTTACTT
ATCAGTATTA CTGTACTTCT CCTACTCATC ACAACTTTGA TGCGCCCATT GCAAACCTTG
AATGATGCGA TTCAAGATGT CGCTTCTGGA GAAGGTGATT TGACCCAACG TTTGAATACA
AAAACCGATA CTGAGTTTTC ATCTTTAGCC ATTAGTTTCA ATACCTTCAC TGCTAATCTT
CAACAACTTA TTATTGAATC TAAATCGATT GGTCGACTCA TCCATCAGAG TTCAGAAATG
ACATCGGTAG AGTTACAACA ATCAACTGAT GCAATGAACT CGCAGCTACA TGAACTCGAA
CAACTTGCCA CCGCAATGCA TGAAATGGCA ACGACCTCAA CAGATGTCGC ACGCAATGCT
CAGGGTGCAG CCTCTGCGGC CAAAGAAGCA GACGACGCCA CCAGTGCAGG AACTCGCGTC
GTTAGCGATA CAACGAAGGC GATTAATGCC TTATCCTCCG AAATCGATAT GGCAGTATCT
GAAGTCAAAA TCTTAGGATC TGCGACAGAT AATATTGCGA CTATCTTAAA AGTCATTAAC
GATATCGCAG ATCAAACCAA TTTGTTGGCC TTAAATGCGG CAATTGAAGC TGCAAGGGCG
GGAGATTCAG GGCGTGGCTT TGCCGTTGTA GCCGATGAAG TCAGAACTCT CGCGCAAAAA
ACACAGCAAT CGACAACACA AATCCGCAAT ATGATAGAAC AACTTCAGCA AGGAGCCCGA
GCCGTGGCAG AAGTGATGCA CCAAAGTAAG GAAACCGCAA AAGATGCCGT TACCCGCGCC
CAAGATGCTA ACACTGCACT CGATAAGATC CGTGAAGCCA TATTACAAAT CACAGACATG
AACCTACAAA TTGCTTCTGC GGCTGAAGAA CAAAGTCTCG TTGCCGAAGA AATAAACAGT
AATACAATTA GGATCAAAGA TTTATCTGTC CAAGTTTCAG ACACGGCCAT TCGTGCTAAC
TCGGCGATGT ATACACAAAC GCAACATATC AAAGAACAAG ACGCAATCCT GAATAAATTT
ATCGTCTAA
 
Protein sequence
MKFSHKIVAA SSALLLVTVT LLTIKQYYSI QKEMQAQVEA SVTEIVDGVR NTVSSEIEAR 
KQLAAYTTSL IEQDLTPAHI SSVITRPTVK NAFLLIGFGY EKDGTNINNN PSWDPGAGWD
PRARPWYKDA KQADKLIITA PYPDSASGEI LVSIATPVKE SGQFIGAIFY DVSLVGLATL
VNEVKLFNAG YVFIVAQDGT TIAHPEEKRN GTPMADYLPN IKVMEQPQKV SIDGKNFTLD
FSKVAGENWY VGVILDEDIA YAAVTDLRNS SILYTVIALL ISITVLLLLI TTLMRPLQTL
NDAIQDVASG EGDLTQRLNT KTDTEFSSLA ISFNTFTANL QQLIIESKSI GRLIHQSSEM
TSVELQQSTD AMNSQLHELE QLATAMHEMA TTSTDVARNA QGAASAAKEA DDATSAGTRV
VSDTTKAINA LSSEIDMAVS EVKILGSATD NIATILKVIN DIADQTNLLA LNAAIEAARA
GDSGRGFAVV ADEVRTLAQK TQQSTTQIRN MIEQLQQGAR AVAEVMHQSK ETAKDAVTRA
QDANTALDKI REAILQITDM NLQIASAAEE QSLVAEEINS NTIRIKDLSV QVSDTAIRAN
SAMYTQTQHI KEQDAILNKF IV