Gene Sbal_0160 details

Gene Information

• Locus tag: Sbal_0160
• ID: 4842481
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS155
• Kingdom: Bacteria
• Replicon accession: NC_009052
• Strand: -
• Start bp: 183558
• End bp: 185519
• Gene Length: 1962 bp
• Protein Length: 653 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 640117373
• Product: methyl-accepting chemotaxis sensory transducer
• Protein accession: YP_001048563
• Protein GI: 126172414
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTCTCCA TAAACCAACT CGCATTAACT AAAAAACTCG CCATAGTGCC AGTGTTACTC 
GTGGCAATGC TTATCACCCT TGGACTCACG AGTTATTTCG CACTAACTGA TATCGATAAT 
AGAATGCGAC TAGTCACTGA AGATCTTGCT CCTGAGAGTG CGATCACCAG CAACTTATTA 
CAGGAAATTT ATCGACTTCG TTTAGCAGTA AAGACCTATG TCAAAACGGG ATCAGCAGAA 
GCCGCCACAG ATTTTAGCAA TCAGAGTAGT AAAGCCCACG AGATGATTGC AAAAGCTAAA 
GCGCACATTT CCTTCCCTGA AAGAATCAAA CTCATCAATC AAATCGGCGA GCACCAAGTC 
GAATATGTTG ACATTTTTAA TCGAAAAATA ATTGTTAATC AGCAAAATAG AGAACGATTA 
GTTTCAGGAA CACTCGATAT TAAAGGGCCT GAGGTTGAAA AGACACTGTC ACAAATCATG 
CAATCTTCCT TTAATGACGG GGATGTCAGG GGCGCATTTT ATGCCGGTAA AACCTTGAGG 
GAACTGCTGT TAGTAAGACT CTATGTGGTG AAGTTTTTAG TCGATAATCA ACCTGAACAA 
GCCAAAAGAT TCACAGATGA ACTCAACAAA ACCCACCTGG CGATAGACGA GCTTGCAGCG 
TCACTCGAAA ATCTCGAATA TCAATCCCAA GTCAAACAGG CAAATCAACT CCTTAAAGAA 
TATGAGCAAG CGGCTCAGTC CGTTGTCGAA GCCATAAATA ATCGCAATAC CGCTATCGTA 
GAGCTTGATA AGATTGGTAT TGAAATGGCT GAAATGACCT CCGACTTGCA AGATAGCACG 
ATGAAATCAC TGTCTGATGC GGGCGATAAA GCGGCTCAGG AAGTCAGTCA AAAAATCACT 
TTCATCAGTA TTATCCTGAT TATCGCCATC CTTATGGCCG CCCTGATAAC CTTTATTGTG 
ACGCAAAGCC TGCTGAGCAG CATTCGTGAA GTTGTCACAC TACTCAATGA AATTGCTGAT 
GGAGAGGCCG ACTTAACTCA AAGATTACCT GAAAATGGCC ATGATGAATT GACTCAATTA 
GCCAAAAATT TCAATCGCTT CGTGGTGCGT ATCCAAGTGT TAGTCTCACA AGTAAAAAAC 
ACCACAGTGC AACTGGTTAG CGCGTCGACT CAACTCAGCA GTGTCACCCA TAGCGCGACC 
AAAGATATGA GCTCGCAGCA AAATGAGACT CAACAGGTTG CCTCCGCGAT AACCGAAATG 
GCAGCAAGCG CCATAGAAGT GGCCGCCAGT GCAGATACTG CCAACAAGCT GTCCGAAGAA 
GCGCGGGAAC AATCCCTCTC CGGCCGTGAA ATTGTCGCTA ATGCCACCCA TTCGATGAAG 
GAATTAGCGG AAAAAGTAGA AGCTTCAGCA AACACCATAG AACTGTTAAG GAATGACAGC 
GACAAAATAG GTGAAGTGCT CGATGTGATT CGTGCGATTG CCGAACAAAC CAATTTACTC 
GCGCTCAATG CCGCCATAGA GGCTGCGCGG GCGGGCGAGC AAGGACGCGG TTTTGCCGTT 
GTTGCCGATG AAGTGCGTTC ACTTGCCAGC CGGACACAGG AATCGACCAA GCAAATTCAG 
CAGATAATTC AAACACTGCA AAACAGATCA AGCTCAGCGG CCACTATGAT GGGACAAAGC 
CGCGAAGCCA CAAGTACAAC CGTGATCCAA GTGACTAAGG TTGAGGCCGC GCTATCGACG 
ATAACGGATA TGGTCATGTC AATCAGCCAC TCAGTCTCAC AAATGGCCCA CGCCGCCGAA 
CAACAGTCGA CGGTTGTCGA AGAGATCAAT ATTTCGATTA ACAGCGTGAG TGAAAGTGCA 
AATCGCACCT TAGGCGGCGT GAATCAAACA GCGAGCTCGG CGAACGACTT ACTCAAACTG 
GGTCATCAAC TAGATAATTT AGTCAGTGAA TTCAGAGTGT AA 

 

Protein sequence

MFSINQLALT KKLAIVPVLL VAMLITLGLT SYFALTDIDN RMRLVTEDLA PESAITSNLL 
QEIYRLRLAV KTYVKTGSAE AATDFSNQSS KAHEMIAKAK AHISFPERIK LINQIGEHQV 
EYVDIFNRKI IVNQQNRERL VSGTLDIKGP EVEKTLSQIM QSSFNDGDVR GAFYAGKTLR 
ELLLVRLYVV KFLVDNQPEQ AKRFTDELNK THLAIDELAA SLENLEYQSQ VKQANQLLKE 
YEQAAQSVVE AINNRNTAIV ELDKIGIEMA EMTSDLQDST MKSLSDAGDK AAQEVSQKIT 
FISIILIIAI LMAALITFIV TQSLLSSIRE VVTLLNEIAD GEADLTQRLP ENGHDELTQL 
AKNFNRFVVR IQVLVSQVKN TTVQLVSAST QLSSVTHSAT KDMSSQQNET QQVASAITEM 
AASAIEVAAS ADTANKLSEE AREQSLSGRE IVANATHSMK ELAEKVEASA NTIELLRNDS 
DKIGEVLDVI RAIAEQTNLL ALNAAIEAAR AGEQGRGFAV VADEVRSLAS RTQESTKQIQ 
QIIQTLQNRS SSAATMMGQS REATSTTVIQ VTKVEAALST ITDMVMSISH SVSQMAHAAE 
QQSTVVEEIN ISINSVSESA NRTLGGVNQT ASSANDLLKL GHQLDNLVSE FRV