More than 300 homologs were found in PanDaTox collection
for query gene PputGB1_0629 on replicon NC_010322
Organism: Pseudomonas putida GB-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002947  PP_0584  methyl-accepting chemotaxis transducer  97.53 
 
 
647 aa  1239    Pseudomonas putida KT2440  Bacteria  normal  0.77697  normal  0.644217 
 
 
-
 
NC_004578  PSPTO_2448  methyl-accepting chemotaxis protein  73.11 
 
 
646 aa  951    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.718596  n/a   
 
 
-
 
NC_010501  PputW619_4580  methyl-accepting chemotaxis sensory transducer  87.58 
 
 
648 aa  1112    Pseudomonas putida W619  Bacteria  normal  normal  0.0108713 
 
 
-
 
NC_007005  Psyr_2220  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  73.11 
 
 
646 aa  951    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.071358  normal  0.520396 
 
 
-
 
NC_007492  Pfl01_0657  chemotaxis sensory transducer, Cache sensor  79.78 
 
 
648 aa  1011    Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.511779  normal 
 
 
-
 
NC_009512  Pput_0623  methyl-accepting chemotaxis sensory transducer  97.84 
 
 
647 aa  1242    Pseudomonas putida F1  Bacteria  normal  0.494937  normal 
 
 
-
 
NC_010322  PputGB1_0629  methyl-accepting chemotaxis sensory transducer with Cache sensor  100 
 
 
647 aa  1310    Pseudomonas putida GB-1  Bacteria  normal  0.624074  hitchhiker  0.000681907 
 
 
-
 
NC_009654  Mmwyl1_2719  methyl-accepting chemotaxis sensory transducer  37.88 
 
 
655 aa  439  9.999999999999999e-123  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_0130  methyl-accepting chemotaxis sensory transducer  38.59 
 
 
671 aa  425  1e-117  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_3100  chemotaxis sensory transducer  34.89 
 
 
652 aa  389  1e-107  Shewanella denitrificans OS217  Bacteria  normal  0.594551  n/a   
 
 
-
 
NC_008752  Aave_1081  methyl-accepting chemotaxis sensory transducer  31.53 
 
 
629 aa  322  9.999999999999999e-87  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_010625  Bphy_5569  methyl-accepting chemotaxis sensory transducer with Cache sensor  30.11 
 
 
630 aa  311  2.9999999999999997e-83  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007953  Bxe_C1139  methyl-accepting chemotaxis sensory transducer, Cache sensor  29.34 
 
 
630 aa  292  1e-77  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.584827 
 
 
-
 
NC_013173  Dbac_1799  methyl-accepting chemotaxis sensory transducer with Cache sensor  29.19 
 
 
668 aa  284  4.0000000000000003e-75  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.481177  n/a   
 
 
-
 
NC_009997  Sbal195_3603  methyl-accepting chemotaxis sensory transducer  31.62 
 
 
630 aa  277  6e-73  Shewanella baltica OS195  Bacteria  normal  0.840663  normal 
 
 
-
 
NC_011663  Sbal223_3405  methyl-accepting chemotaxis sensory transducer with Cache sensor  31.62 
 
 
630 aa  276  6e-73  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0882  methyl-accepting chemotaxis sensory transducer  31.62 
 
 
630 aa  276  8e-73  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_001423  methyl-accepting chemotaxis protein  30.19 
 
 
623 aa  276  1.0000000000000001e-72  Vibrio sp. Ex25  Bacteria  normal  0.896179  n/a   
 
 
-
 
NC_009831  Ssed_3477  putative methyl-accepting chemotaxis protein  35.67 
 
 
622 aa  275  2.0000000000000002e-72  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.000522984 
 
 
-
 
NC_009665  Shew185_3480  methyl-accepting chemotaxis sensory transducer  31.46 
 
 
630 aa  275  2.0000000000000002e-72  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_06314  histidine kinase  31.07 
 
 
623 aa  274  3e-72  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008577  Shewana3_0895  methyl-accepting chemotaxis sensory transducer  31.72 
 
 
630 aa  270  5.9999999999999995e-71  Shewanella sp. ANA-3  Bacteria  normal  normal  0.174985 
 
 
-
 
NC_004347  SO_1056  methyl-accepting chemotaxis protein  31.9 
 
 
630 aa  268  2.9999999999999995e-70  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008321  Shewmr4_3042  methyl-accepting chemotaxis sensory transducer  31.61 
 
 
630 aa  265  2e-69  Shewanella sp. MR-4  Bacteria  normal  normal  0.397129 
 
 
-
 
NC_010322  PputGB1_0343  methyl-accepting chemotaxis sensory transducer  31.1 
 
 
645 aa  263  8e-69  Pseudomonas putida GB-1  Bacteria  normal  0.675969  normal 
 
 
-
 
NC_008322  Shewmr7_0930  methyl-accepting chemotaxis sensory transducer  31.46 
 
 
630 aa  263  8.999999999999999e-69  Shewanella sp. MR-7  Bacteria  normal  normal  0.257402 
 
 
-
 
NC_013456  VEA_003139  methyl-accepting chemotaxis protein  34.57 
 
 
627 aa  262  1e-68  Vibrio sp. Ex25  Bacteria  normal  0.116124  n/a   
 
 
-
 
NC_009457  VC0395_A0908  methyl-accepting chemotaxis protein  35.44 
 
 
633 aa  260  6e-68  Vibrio cholerae O395  Bacteria  hitchhiker  0.00000172893  n/a   
 
 
-
 
NC_008345  Sfri_0080  methyl-accepting chemotaxis sensory transducer  35.86 
 
 
636 aa  260  7e-68  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_00119  methyl-accepting chemotaxis protein  31.88 
 
 
626 aa  258  2e-67  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009439  Pmen_2154  methyl-accepting chemotaxis sensory transducer  35.56 
 
 
627 aa  258  2e-67  Pseudomonas mendocina ymp  Bacteria  normal  0.0789614  normal  0.507372 
 
 
-
 
NC_009092  Shew_0085  methyl-accepting chemotaxis sensory transducer  36.48 
 
 
638 aa  259  2e-67  Shewanella loihica PV-4  Bacteria  normal  0.0647334  normal 
 
 
-
 
NC_009783  VIBHAR_01884  hypothetical protein  34.14 
 
 
627 aa  258  3e-67  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_002947  PP_0320  methyl-accepting chemotaxis sensory transducer  30.28 
 
 
645 aa  256  7e-67  Pseudomonas putida KT2440  Bacteria  normal  decreased coverage  0.0000409011 
 
 
-
 
NC_009512  Pput_0342  methyl-accepting chemotaxis sensory transducer  30.28 
 
 
645 aa  256  1.0000000000000001e-66  Pseudomonas putida F1  Bacteria  normal  0.860801  normal 
 
 
-
 
NC_010501  PputW619_4887  methyl-accepting chemotaxis sensory transducer  30.72 
 
 
645 aa  254  3e-66  Pseudomonas putida W619  Bacteria  normal  normal  0.658451 
 
 
-
 
NC_009831  Ssed_4404  methyl-accepting chemotaxis sensory transducer  35.03 
 
 
638 aa  254  5.000000000000001e-66  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0156105 
 
 
-
 
NC_009439  Pmen_3309  methyl-accepting chemotaxis sensory transducer  35.17 
 
 
625 aa  254  5.000000000000001e-66  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.776822 
 
 
-
 
NC_009456  VC0395_0316  methyl-accepting chemotaxis protein  34.08 
 
 
652 aa  253  6e-66  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_002967  TDE2142  methyl-accepting chemotaxis protein  28.11 
 
 
712 aa  253  7e-66  Treponema denticola ATCC 35405  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_3489  methyl-accepting chemotaxis sensory transducer  32.78 
 
 
628 aa  253  8.000000000000001e-66  Pseudomonas putida F1  Bacteria  normal  0.228387  normal 
 
 
-
 
NC_009656  PSPA7_4877  chemotactic transducer PctB  33.46 
 
 
629 aa  253  8.000000000000001e-66  Pseudomonas aeruginosa PA7  Bacteria  normal  0.164155  n/a   
 
 
-
 
NC_004578  PSPTO_3379  methyl-accepting chemotaxis protein  43.73 
 
 
559 aa  252  1e-65  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_3856  methyl-accepting chemotaxis sensory transducer  32.2 
 
 
640 aa  252  1e-65  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.825575 
 
 
-
 
NC_009654  Mmwyl1_4029  methyl-accepting chemotaxis sensory transducer  33.08 
 
 
630 aa  252  1e-65  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_013457  VEA_001073  N-acetylglucosamine regulated methyl-accepting chemotaxis protein  33.52 
 
 
628 aa  252  1e-65  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_56010  chemotactic transducer PctB  33.46 
 
 
629 aa  253  1e-65  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_3017  methyl-accepting chemotaxis sensory transducer  31.62 
 
 
630 aa  251  2e-65  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_0734  methyl-accepting chemotaxis sensory transducer  36.89 
 
 
643 aa  251  3e-65  Pseudomonas mendocina ymp  Bacteria  normal  0.770301  normal 
 
 
-
 
NC_009052  Sbal_0194  methyl-accepting chemotaxis sensory transducer  34.07 
 
 
623 aa  251  3e-65  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0808  methyl-accepting chemotaxis sensory transducer  42.98 
 
 
554 aa  250  5e-65  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_4795  methyl-accepting chemotaxis sensory transducer  34.61 
 
 
638 aa  250  5e-65  Shewanella woodyi ATCC 51908  Bacteria  normal  0.884167  hitchhiker  0.000462611 
 
 
-
 
NC_009457  VC0395_A1741  methyl-accepting chemotaxis protein  34.53 
 
 
623 aa  250  5e-65  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_0450  chemotaxis sensory transducer  30.83 
 
 
645 aa  250  5e-65  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_1880  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.34 
 
 
628 aa  250  5e-65  Pseudomonas putida GB-1  Bacteria  normal  0.454316  normal 
 
 
-
 
NC_002947  PP_2249  methyl-accepting chemotaxis transducer  32.62 
 
 
643 aa  250  6e-65  Pseudomonas putida KT2440  Bacteria  normal  0.477129  normal  0.786945 
 
 
-
 
NC_009092  Shew_0596  methyl-accepting chemotaxis sensory transducer  33.48 
 
 
640 aa  249  1e-64  Shewanella loihica PV-4  Bacteria  normal  normal  0.270432 
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  34.43 
 
 
712 aa  248  2e-64  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_009901  Spea_3491  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.33 
 
 
626 aa  249  2e-64  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_3020  methyl-accepting chemotaxis sensory transducer  28.18 
 
 
697 aa  249  2e-64  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  33.51 
 
 
713 aa  247  4.9999999999999997e-64  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_003910  CPS_1439  methyl-accepting chemotaxis protein  34.32 
 
 
641 aa  246  6.999999999999999e-64  Colwellia psychrerythraea 34H  Bacteria  normal  0.336763  n/a   
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  38.94 
 
 
637 aa  246  6.999999999999999e-64  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  34.78 
 
 
712 aa  246  6.999999999999999e-64  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_004347  SO_4557  methyl-accepting chemotaxis protein  34.37 
 
 
623 aa  245  1.9999999999999999e-63  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008577  Shewana3_3950  methyl-accepting chemotaxis sensory transducer  34.14 
 
 
623 aa  244  3e-63  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_1061  methyl-accepting chemotaxis protein  32.11 
 
 
626 aa  244  3e-63  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.646209  n/a   
 
 
-
 
NC_007005  Psyr_0906  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  32.39 
 
 
626 aa  244  3e-63  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_1723  methyl-accepting chemotaxis sensory transducer with Cache sensor  31.65 
 
 
626 aa  244  3.9999999999999997e-63  Pseudomonas putida W619  Bacteria  normal  0.372844  normal 
 
 
-
 
NC_004347  SO_4454  methyl-accepting chemotaxis protein  36.09 
 
 
642 aa  244  3.9999999999999997e-63  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008321  Shewmr4_3752  methyl-accepting chemotaxis sensory transducer  34.14 
 
 
623 aa  244  3.9999999999999997e-63  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  42.05 
 
 
541 aa  244  3.9999999999999997e-63  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_29760  putative chemotaxis transducer  35.78 
 
 
714 aa  244  3.9999999999999997e-63  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_0099  chemotaxis sensory transducer  35.64 
 
 
639 aa  243  7e-63  Shewanella denitrificans OS217  Bacteria  unclonable  0.0000000152719  n/a   
 
 
-
 
NC_008700  Sama_3522  putative methyl-accepting chemotaxis sensory transducer  36.46 
 
 
636 aa  243  1e-62  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_4876  chemotactic transducer PctA  32.53 
 
 
629 aa  243  1e-62  Pseudomonas aeruginosa PA7  Bacteria  normal  0.647167  n/a   
 
 
-
 
NC_009092  Shew_0237  methyl-accepting chemotaxis sensory transducer  33.74 
 
 
632 aa  242  1e-62  Shewanella loihica PV-4  Bacteria  normal  normal  0.997473 
 
 
-
 
NC_008463  PA14_56000  chemotactic transducer PctA  32.96 
 
 
629 aa  243  1e-62  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0512673  normal 
 
 
-
 
NC_011901  Tgr7_0851  methyl-accepting chemotaxis sensory transducer  42.5 
 
 
674 aa  241  2e-62  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.244273  n/a   
 
 
-
 
NC_009439  Pmen_1998  methyl-accepting chemotaxis sensory transducer  45.78 
 
 
714 aa  242  2e-62  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.0164438 
 
 
-
 
NC_008322  Shewmr7_3825  methyl-accepting chemotaxis sensory transducer  33.84 
 
 
623 aa  242  2e-62  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  44.38 
 
 
636 aa  241  2.9999999999999997e-62  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_011313  VSAL_II1022  methyl-accepting chemotaxis protein  33.4 
 
 
628 aa  241  2.9999999999999997e-62  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.771007  n/a   
 
 
-
 
NC_007492  Pfl01_0124  chemotaxis sensory transducer, Cache sensor  33.76 
 
 
626 aa  241  4e-62  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.201174  normal 
 
 
-
 
NC_008321  Shewmr4_0271  methyl-accepting chemotaxis sensory transducer  35.94 
 
 
638 aa  240  5.999999999999999e-62  Shewanella sp. MR-4  Bacteria  normal  0.758035  hitchhiker  0.0000678809 
 
 
-
 
NC_009665  Shew185_0275  methyl-accepting chemotaxis sensory transducer  35.74 
 
 
638 aa  239  1e-61  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_0283  methyl-accepting chemotaxis sensory transducer  35.74 
 
 
638 aa  239  1e-61  Shewanella baltica OS195  Bacteria  normal  0.411591  normal 
 
 
-
 
NC_009456  VC0395_0173  methyl-accepting chemotaxis protein  31.79 
 
 
639 aa  239  1e-61  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_0282  methyl-accepting chemotaxis sensory transducer  35.74 
 
 
641 aa  239  1e-61  Shewanella baltica OS155  Bacteria  normal  0.0149105  n/a   
 
 
-
 
NC_011663  Sbal223_0279  methyl-accepting chemotaxis sensory transducer  35.74 
 
 
638 aa  239  1e-61  Shewanella baltica OS223  Bacteria  normal  0.983838  normal 
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  38.17 
 
 
541 aa  239  1e-61  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_010506  Swoo_0252  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.21 
 
 
623 aa  238  3e-61  Shewanella woodyi ATCC 51908  Bacteria  normal  0.866394  normal 
 
 
-
 
NC_009784  VIBHAR_04784  histidine kinase  31.81 
 
 
628 aa  238  3e-61  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008577  Shewana3_0272  methyl-accepting chemotaxis sensory transducer  35.94 
 
 
638 aa  238  3e-61  Shewanella sp. ANA-3  Bacteria  decreased coverage  0.00090491  hitchhiker  0.000000349734 
 
 
-
 
NC_009438  Sputcn32_0323  methyl-accepting chemotaxis sensory transducer  34.62 
 
 
623 aa  237  5.0000000000000005e-61  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_0354  chemotaxis sensory transducer, Cache sensor  33.45 
 
 
630 aa  237  5.0000000000000005e-61  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_2546  putative chemotaxis transducer  36.11 
 
 
714 aa  236  7e-61  Pseudomonas aeruginosa PA7  Bacteria  normal  0.410637  n/a   
 
 
-
 
NC_009438  Sputcn32_2121  methyl-accepting chemotaxis sensory transducer  33 
 
 
622 aa  236  7e-61  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_1011  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.15 
 
 
624 aa  236  8e-61  Pseudomonas putida W619  Bacteria  normal  0.752503  hitchhiker  0.0000000000251926 
 
 
-
 
NC_008322  Shewmr7_3750  methyl-accepting chemotaxis sensory transducer  35.73 
 
 
638 aa  236  8e-61  Shewanella sp. MR-7  Bacteria  normal  0.666265  normal  0.186245 
 
 
-
 
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