| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0629 |
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| Symbol | |
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| ID | 5868375 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 715213 |
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| End bp | 717156 |
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| Gene Length | 1944 bp |
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| Protein Length | 647 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641545717 |
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| Product | methyl-accepting chemotaxis sensory transducer with Cache sensor |
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| Protein accession | YP_001666876 |
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| Protein GI | 167031645 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.624074 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.000681907 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCATCA AACAGAAACT GACCTGGGCA TTCGCGGTCA TCGCCGGCTT GCCCATCGTC
CTAGTGGCCA CTCTGGTGGT CCTCAACCTG CGTGGCGAAG CCCGCGATGG ATTCCTCGAC
GGTAGCAGCC GGGAAATCCG CCAGGTCAGC AACGCGATGA ACATCTTCTT CCAGGGCATC
AACCAGAACG TCGAGTACCT GGCTTCCCAG CCAATGGTCG CTGCCACGGG CAGCGAGCTG
AACAAGTACA TGAGCGCCAC ACCGTCCTAC GAACTGGGCG AACAGGCCAG CAAGCTCCTC
GAATTCATGA CCCGCCTGGC CAACTCGCAC CCCGCTTATG CCTACCTGTC CTACGGCGTG
AATGACGGCG GCTACACGGG CTGGCCGGCC GGGCAGAAGT TCGTCAACTA CGACCCACGC
ACCCGCCCCT GGTACCAACT GGCCATGGCC AACCCAGGCA AGACCGTGCG CACCGGCGCT
TACTACTGGG CCGCCGACGA CGCGGTGCTG GTCAGCACCG TGCGCGCCGT GGCCAACCAG
CTGGGCAACC CCGGCGGCGT GGTCAACATC GATGTTTCCC TCAAGGGCCT GACCGAGATC
GTCAAGCAGA TCAAGCTGGG CGAAAGTGGC TACCTAATGC TGGTGGAAAG CAACGGCAAC
GTGATGGTCG ACCCGCGCGA TGCAGGCCAC AACTTCAAGC AACTGGCGAG TTTTGGCGAC
GGTTACGCCG AGCTGGCCAA GGCCGGCAAA GGCCTGGTCG AGGTCGAGCT CAATGGCGTG
CGCTACATGG CCAACGTCTA CCCCGACGAG CAACTGGGCT GGACCTTCAT CGGCCTGATC
GAACAAAGCG AGGTGATGCA GACCACCACC CGCCTGACCT GGCTGATCGG CGTCATCGCC
GTGGTGCTGG CCGTGCTGTT CGCCGTGGTC GGTGCGGCCT TCGCCAAACT GATCGTGCGC
CCGATCAACA GTGTCACCAA TGGCCTGGAA GACATTGCCC AAGGTGAAGG CGACCTGACC
CGCAACCTGG AAATCCGCGG CCGCGACGAA ACCGCGCAAT TGGCCAGCTG GTTCAACCAA
TTCCTCGGCG CCATTCGCAG CCTGATCCAG CACATCGGCG CTGCCGCCAG CAAGATCCTC
AGCACCTCCA GCAGCTCGAC CCGCGTCTCC AGCGACATGG CCGAGGCCGC CGGCCGTCAG
CGCGAAGCCG TGGACATGGT GTCCACTGCC TTCCACGAGA TGGTCGCCAC CGCCAACGAA
GTAGCGCGGT CTTGCAGCCA GGCGGCGCAG TCGGCCGACA GCGGCCAGCA GCAAGCCCGC
GAAGGCCAGC AACAGATCGA TGCCGCGGTA AGCAGCGTGG ACCGCCTGAG CCACGAGATC
GAGCAGTCGG CGCAGTCGAT CCAGCAATTG GAGCGTGACA GCAACGCCAT CCAGTCGATC
CTCGGCACCA TCCGCTCCAT TGCCGAACAG ACCAACCTGC TGGCCCTGAA CGCGGCCATC
GAAGCAGCTC GTGCCGGTGA GCAGGGACGT GGCTTTGCCG TGGTGGCCGA CGAAGTGCGG
GCCCTGGCCA AGCGCACTGC CGACTCCACC GCCGAAATCG ACGGTTTGCT GGGCAACCTG
GCCAGCCGCA CTGCCGAAGT GGCCGAACAG ATGCATGCCA GCCTGGAAGT TTCGCAGCAG
TCGGTGAGCC GTATCGGCCT GGCCCGCGAC AGCTTCGGGC AGATCCGTGA GTCGGTGGAC
GTGATCCGCG ACATGAACAC GCAGATCGCC ACGGCGGCCG AAGAACAGCA CCAGGTGGCC
GAGGACATCA ACCGCCACAT CAGCCAGATT CACGGCGATG CGCAACTGGT GGCCGAACTG
GCCCAGGCGG CGCGTCAGGA CTCCGAGAGC CTGGCCGGGC TGTCCAATGA ACTGGACACG
CTGGTGCGCA GGTTCCGCAC CTGA
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| Protein sequence | MSIKQKLTWA FAVIAGLPIV LVATLVVLNL RGEARDGFLD GSSREIRQVS NAMNIFFQGI
NQNVEYLASQ PMVAATGSEL NKYMSATPSY ELGEQASKLL EFMTRLANSH PAYAYLSYGV
NDGGYTGWPA GQKFVNYDPR TRPWYQLAMA NPGKTVRTGA YYWAADDAVL VSTVRAVANQ
LGNPGGVVNI DVSLKGLTEI VKQIKLGESG YLMLVESNGN VMVDPRDAGH NFKQLASFGD
GYAELAKAGK GLVEVELNGV RYMANVYPDE QLGWTFIGLI EQSEVMQTTT RLTWLIGVIA
VVLAVLFAVV GAAFAKLIVR PINSVTNGLE DIAQGEGDLT RNLEIRGRDE TAQLASWFNQ
FLGAIRSLIQ HIGAAASKIL STSSSSTRVS SDMAEAAGRQ REAVDMVSTA FHEMVATANE
VARSCSQAAQ SADSGQQQAR EGQQQIDAAV SSVDRLSHEI EQSAQSIQQL ERDSNAIQSI
LGTIRSIAEQ TNLLALNAAI EAARAGEQGR GFAVVADEVR ALAKRTADST AEIDGLLGNL
ASRTAEVAEQ MHASLEVSQQ SVSRIGLARD SFGQIRESVD VIRDMNTQIA TAAEEQHQVA
EDINRHISQI HGDAQLVAEL AQAARQDSES LAGLSNELDT LVRRFRT
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