| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2528 |
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| Symbol | |
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| ID | 4604775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3037392 |
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| End bp | 3039389 |
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| Gene Length | 1998 bp |
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| Protein Length | 665 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639781923 |
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| Product | putative methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_928400 |
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| Protein GI | 119775660 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACATA TCAAACGTTC TTTGAGCCTA CAGCTTGTAC TGACGCTGGT TGGCGCGCTG
GCGATATTGC TGGCGCTGGT CGCAACCTTT TTGGTCCGTG ATGCCAGCCA ATCCACCCGC
TCTACCATTG ATGGCGACAT CAATGCGCTG ATGGAGCAAA AAAGCCGCGA CATTCGTGGC
TACTTTGTTG CTAAGGGCCA AATCATCCAT GCAGTGTTTG CCGAACCCGG CCTCGTGGAC
TGGTTTACCC AATACAAGGC CAGGGGCAGC AACCTTGCCA GCGATGCCCA ATATCAGCGC
ATAGTGCAGT ACTTCAAATA TTTTTCCGAC AAGGATGCCG ATATCAAGTC GGTATTCTTT
GGCTCTGCCA ATACCTTTGA ATATTTCGAC CTCAACGGCC GTTACGATGG CGACCCCAAT
TACTACACCA ACAAGCGCCC CTGGTGGCAG GAAGCTCTCG ATAAAGGCGG CCTGTTTGTG
GGCGACCCGG CTGTCGACGC CAATGATGGC TCTATCTCGG CGACGGTAAA AACGCCGGTT
TATGGAGCCA ACGGCCAGTT GTTGGGTATT GGCGGCATGG ACATTCTTAT CGATACCATT
GGCAAGTCGC TGCTGGCCCC CATTAAATAT CAGGGCTCTG GCCAGGCGTT TCTGATGACG
GGCGATGGCA AGCTGGTGTA CTTCCCCGGT TTTAACGAGA GTTTTCCACC TGGCTCAGCC
ATTCAAAAGG TCGACAATAA TGGCAGCGAA GGCTTCACTG CCCTTGGCCA ATTGATGCAG
CGCCAATCCA GTGGTTTTAC CGATGTGGTC TATCAGGGGA GTCCCCAGCG CGTGGCCTTC
GTTGAAGTGG CTGGGGACTA CCCCAAACAA AAATGGCACC TGGCCTTTAT GCTTCCCCAT
GAGGTGATTG AGGCGCCGGT GCGCGATGCC TTCTGGAATG CCTGCCTGAT GTCTCTGGGT
ATCATCCTCC TGGTGGGCGT GACAGTGTGG CTGTTGCTGC TCCCGCTTCG CAGGCAGCTC
GAGTCGCTCC TCGGTGCCAT GGACAACATG GCAAGCGGTG AGGGTGATTT GTCCCGCCGT
ATCGACATTC AGCGGGAAGA TGAGCTTGGG CTCATGGCGG ATGCCTTCAA TCGGTTTGCA
GCCAAGGTAC AACAGATGCT GCGACAGACC CGTGACCTGA CCCGCGATGT GGACGACGGC
ATTGTTGAAG CCCGTAAAAT TTGTGATGTG GCCGTTGGTG CCGTCTCCAG GCAAAAGGCA
CAAATCGACT CGGTCGCGGC CGCCGCTATT GAAATGGCTC ACACCAGTCA GGAAATGGCT
GCCAGCGCAC AGCGGACGGC TGACTTTGCC GAAACTGCCC AGACACAGGC CGATGACGGC
AAACAAATAG TAGCCGAGGC TACTTCTGGC ATAGAAACCC TCTCATCCAG AGTGATAGAA
GCCGCAGCAG TGATAAAAGA GCTCAGGGGC AGCTCAGAAA AAATTGGTGA AGTACTCAGC
GTTATCCGTA ACATTGCCGA GCAAACCAAT CTGCTGGCGC TCAACGCCGC CATTGAAGCC
GCCAGAGCCG GGGAGCAGGG GCGGGGTTTT GCCGTGGTGG CCGATGAGGT GCGCACTCTG
GCATCCCGTA CGCAGGATTC TACCGCCAAC ATTCAGGGTA TCATCCAGCG CTTGCAACAA
AGTGCCATGG AGGCCGAATC AGTTATGGAG GCAGGTGTGA ACGACGCCAA GCGCGGACAA
TTGCTGACCA GTCAGGTGCA GGACTCCCTT GGCAAGATCA CCGATGCCAT TGGCGCAATA
TTGCAGCAAA CCACCGAAAT TACTGTGGCC ATTGGCCAGC AGGCGGTGGT GGCCGACGAA
GTGGCGCAGA ATGTGGAAAA TGTGCGCGGA CTGTCCGATG ATTCCCATTC TGCCAGTCAG
GAATTGGCGG TCAGCCTCAA GGCATTCGAA CAGCTCACCC ACGCACTGTC CGGTAATATC
TCGCAGTTCC GGGTGTAA
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| Protein sequence | MGHIKRSLSL QLVLTLVGAL AILLALVATF LVRDASQSTR STIDGDINAL MEQKSRDIRG
YFVAKGQIIH AVFAEPGLVD WFTQYKARGS NLASDAQYQR IVQYFKYFSD KDADIKSVFF
GSANTFEYFD LNGRYDGDPN YYTNKRPWWQ EALDKGGLFV GDPAVDANDG SISATVKTPV
YGANGQLLGI GGMDILIDTI GKSLLAPIKY QGSGQAFLMT GDGKLVYFPG FNESFPPGSA
IQKVDNNGSE GFTALGQLMQ RQSSGFTDVV YQGSPQRVAF VEVAGDYPKQ KWHLAFMLPH
EVIEAPVRDA FWNACLMSLG IILLVGVTVW LLLLPLRRQL ESLLGAMDNM ASGEGDLSRR
IDIQREDELG LMADAFNRFA AKVQQMLRQT RDLTRDVDDG IVEARKICDV AVGAVSRQKA
QIDSVAAAAI EMAHTSQEMA ASAQRTADFA ETAQTQADDG KQIVAEATSG IETLSSRVIE
AAAVIKELRG SSEKIGEVLS VIRNIAEQTN LLALNAAIEA ARAGEQGRGF AVVADEVRTL
ASRTQDSTAN IQGIIQRLQQ SAMEAESVME AGVNDAKRGQ LLTSQVQDSL GKITDAIGAI
LQQTTEITVA IGQQAVVADE VAQNVENVRG LSDDSHSASQ ELAVSLKAFE QLTHALSGNI
SQFRV
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