More than 300 homologs were found in PanDaTox collection
for query gene RPC_3804 on replicon NC_007925
Organism: Rhodopseudomonas palustris BisB18



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009485  BBta_1388  methyl-accepting chemotaxis sensory transducer  56.88 
 
 
656 aa  653    Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0527529  normal  0.207734 
 
 
-
 
NC_011004  Rpal_5172  methyl-accepting chemotaxis sensory transducer  60.82 
 
 
656 aa  721    Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_3804  methyl-accepting chemotaxis sensory transducer  100 
 
 
655 aa  1296    Rhodopseudomonas palustris BisB18  Bacteria  normal  0.772812  normal 
 
 
-
 
NC_007958  RPD_0994  chemotaxis sensory transducer  64.07 
 
 
656 aa  771    Rhodopseudomonas palustris BisB5  Bacteria  normal  0.357708  normal 
 
 
-
 
NC_007958  RPD_0995  chemotaxis sensory transducer  68.3 
 
 
656 aa  822    Rhodopseudomonas palustris BisB5  Bacteria  normal  0.880627  normal 
 
 
-
 
NC_007925  RPC_2457  methyl-accepting chemotaxis sensory transducer  47.39 
 
 
665 aa  526  1e-148  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.0375918  normal  0.509707 
 
 
-
 
NC_007925  RPC_3380  methyl-accepting chemotaxis sensory transducer  75.14 
 
 
567 aa  510  1e-143  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.689596 
 
 
-
 
NC_007778  RPB_2358  methyl-accepting chemotaxis sensory transducer  72.7 
 
 
673 aa  499  1e-140  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.207811 
 
 
-
 
NC_011004  Rpal_3598  methyl-accepting chemotaxis sensory transducer  69.83 
 
 
672 aa  497  1e-139  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_2250  methyl-accepting chemotaxis sensory transducer  74.66 
 
 
670 aa  498  1e-139  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_3379  methyl-accepting chemotaxis sensory transducer  77.49 
 
 
587 aa  496  1e-139  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.787169  normal 
 
 
-
 
NC_007958  RPD_0065  chemotaxis sensory transducer  71.98 
 
 
688 aa  486  1e-136  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0714339 
 
 
-
 
NC_007958  RPD_0153  chemotaxis sensory transducer  72.33 
 
 
602 aa  483  1e-135  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_3107  chemotaxis sensory transducer  71.89 
 
 
674 aa  483  1e-135  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0664997 
 
 
-
 
NC_009485  BBta_0969  methyl-accepting chemotaxis sensory transducer  72.07 
 
 
562 aa  479  1e-134  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.956339  normal  0.570918 
 
 
-
 
NC_007925  RPC_4406  methyl-accepting chemotaxis sensory transducer  68.67 
 
 
566 aa  481  1e-134  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.341232 
 
 
-
 
NC_007958  RPD_1918  chemotaxis sensory transducer  61.57 
 
 
688 aa  481  1e-134  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.537222 
 
 
-
 
NC_007778  RPB_0192  methyl-accepting chemotaxis sensory transducer  72.36 
 
 
688 aa  475  1e-133  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_4407  methyl-accepting chemotaxis sensory transducer  71.05 
 
 
566 aa  476  1e-133  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.365939 
 
 
-
 
NC_009485  BBta_2904  putative methyl-accepting chemotaxis protein  68.65 
 
 
568 aa  477  1e-133  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.481458  normal  0.283558 
 
 
-
 
NC_009485  BBta_4464  methyl-accepting chemotaxis sensory transducer  70.24 
 
 
573 aa  476  1e-133  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.610641  normal  0.757777 
 
 
-
 
NC_007778  RPB_4280  methyl-accepting chemotaxis sensory transducer  72.65 
 
 
563 aa  474  1e-132  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_2983  methyl-accepting chemotaxis sensory transducer  70.67 
 
 
561 aa  471  1.0000000000000001e-131  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.0323515 
 
 
-
 
NC_011004  Rpal_2025  methyl-accepting chemotaxis sensory transducer  47.49 
 
 
688 aa  467  9.999999999999999e-131  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0110809  n/a   
 
 
-
 
NC_007778  RPB_3545  methyl-accepting chemotaxis sensory transducer  71.59 
 
 
689 aa  469  9.999999999999999e-131  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.457552  normal  0.598514 
 
 
-
 
NC_009485  BBta_7508  putative methyl-accepting chemotaxis protein (with a HAMP region)  70.37 
 
 
552 aa  467  9.999999999999999e-131  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.692825  normal 
 
 
-
 
NC_007925  RPC_2149  methyl-accepting chemotaxis sensory transducer  71.23 
 
 
675 aa  464  1e-129  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.0391093 
 
 
-
 
NC_007925  RPC_2742  methyl-accepting chemotaxis sensory transducer  72.36 
 
 
560 aa  462  1e-129  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.429688 
 
 
-
 
NC_007925  RPC_3161  methyl-accepting chemotaxis sensory transducer  67.35 
 
 
731 aa  464  1e-129  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.072786  normal 
 
 
-
 
NC_009485  BBta_6483  methyl-accepting chemotaxis protein  63.32 
 
 
565 aa  459  9.999999999999999e-129  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.877741  normal 
 
 
-
 
NC_007925  RPC_4101  methyl-accepting chemotaxis sensory transducer  73.85 
 
 
698 aa  459  9.999999999999999e-129  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0497  chemotaxis sensory transducer  69.46 
 
 
577 aa  462  9.999999999999999e-129  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_2465  chemotaxis sensory transducer  70.46 
 
 
561 aa  461  9.999999999999999e-129  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.5909  normal  0.697276 
 
 
-
 
NC_007964  Nham_1080  methyl-accepting chemotaxis sensory transducer  69.86 
 
 
698 aa  458  1e-127  Nitrobacter hamburgensis X14  Bacteria  normal  0.0139762  n/a   
 
 
-
 
NC_007925  RPC_1795  methyl-accepting chemotaxis sensory transducer  70.27 
 
 
561 aa  456  1e-127  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.432423  normal  0.0230577 
 
 
-
 
NC_007406  Nwi_2996  methyl-accepting chemotaxis protein  66.15 
 
 
698 aa  454  1.0000000000000001e-126  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_6635  methyl-accepting chemotaxis protein  66.84 
 
 
565 aa  453  1.0000000000000001e-126  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.459746  normal  0.104137 
 
 
-
 
NC_011004  Rpal_2757  methyl-accepting chemotaxis sensory transducer  69 
 
 
561 aa  455  1.0000000000000001e-126  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0630329  n/a   
 
 
-
 
NC_009485  BBta_2903  methyl-accepting chemotaxis sensory transducer  67.35 
 
 
568 aa  450  1e-125  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.335645  normal  0.0996392 
 
 
-
 
NC_011004  Rpal_5119  methyl-accepting chemotaxis sensory transducer  69.41 
 
 
563 aa  452  1e-125  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_1253  methyl-accepting chemotaxis sensory transducer  74.46 
 
 
567 aa  452  1e-125  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.010155 
 
 
-
 
NC_007925  RPC_1843  methyl-accepting chemotaxis sensory transducer  70 
 
 
568 aa  449  1e-125  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.618754 
 
 
-
 
NC_009485  BBta_2901  methyl-accepting chemotaxis sensory transducer  56.18 
 
 
674 aa  447  1.0000000000000001e-124  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.14772  normal  0.22504 
 
 
-
 
NC_011004  Rpal_4118  methyl-accepting chemotaxis sensory transducer  67.71 
 
 
567 aa  444  1e-123  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_2744  methyl-accepting chemotaxis sensory transducer  66.58 
 
 
572 aa  444  1e-123  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.696609  normal  0.585687 
 
 
-
 
NC_009485  BBta_2906  putative methyl-accepting chemotaxis protein  63.7 
 
 
564 aa  442  1e-123  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.430156  normal  0.106702 
 
 
-
 
NC_009485  BBta_2907  putative methyl-accepting chemotaxis protein  70.36 
 
 
556 aa  442  1e-123  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.835875  normal  0.0729634 
 
 
-
 
NC_007925  RPC_4580  methyl-accepting chemotaxis sensory transducer  67.65 
 
 
563 aa  439  9.999999999999999e-123  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.174371  normal 
 
 
-
 
NC_011004  Rpal_5120  methyl-accepting chemotaxis sensory transducer  67.29 
 
 
563 aa  438  1e-121  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_3377  methyl-accepting chemotaxis sensory transducer  66.49 
 
 
563 aa  437  1e-121  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.528008  normal 
 
 
-
 
NC_007958  RPD_3547  chemotaxis sensory transducer  69.17 
 
 
566 aa  437  1e-121  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_1830  methyl-accepting chemotaxis sensory transducer  65.62 
 
 
563 aa  434  1e-120  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_1857  chemotaxis sensory transducer  66.58 
 
 
563 aa  433  1e-120  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_4941  methyl-accepting chemotaxis sensory transducer  71.62 
 
 
563 aa  431  1e-119  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.396774  n/a   
 
 
-
 
NC_007925  RPC_3378  methyl-accepting chemotaxis sensory transducer  66.93 
 
 
563 aa  432  1e-119  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.104618  normal 
 
 
-
 
NC_007778  RPB_4286  methyl-accepting chemotaxis sensory transducer  66.31 
 
 
563 aa  422  1e-117  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_2961  methyl-accepting chemotaxis sensory transducer  67.91 
 
 
563 aa  422  1e-116  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_0489  methyl-accepting chemotaxis sensory transducer  67.02 
 
 
564 aa  417  9.999999999999999e-116  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.301128  normal 
 
 
-
 
NC_007778  RPB_1321  methyl-accepting chemotaxis sensory transducer  66.57 
 
 
730 aa  417  9.999999999999999e-116  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0177086  normal  0.260794 
 
 
-
 
NC_011004  Rpal_1871  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  65.66 
 
 
716 aa  419  9.999999999999999e-116  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_0337  chemotaxis sensory transducer  66.49 
 
 
563 aa  419  9.999999999999999e-116  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.760858  normal  0.789667 
 
 
-
 
NC_009485  BBta_6717  methyl-accepting chemotaxis sensory transducer  62.66 
 
 
741 aa  417  9.999999999999999e-116  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.447835  normal  0.587139 
 
 
-
 
NC_009485  BBta_2900  putative methyl-accepting chemotaxis receptor/sensory transducer (chemoreceptor)  68.68 
 
 
675 aa  414  1e-114  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.142675  normal  0.173139 
 
 
-
 
NC_011004  Rpal_4783  methyl-accepting chemotaxis sensory transducer  59.9 
 
 
730 aa  415  1e-114  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2905  putative methyl-accepting chemotaxis protein  63.86 
 
 
542 aa  414  1e-114  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.234112  normal  0.211145 
 
 
-
 
NC_009485  BBta_4269  putative methyl-accepting chemotaxis receptor/sensory transducer protein  65.93 
 
 
691 aa  414  1e-114  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.35374 
 
 
-
 
NC_011004  Rpal_2054  methyl-accepting chemotaxis sensory transducer  41.98 
 
 
665 aa  411  1e-113  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_4271  methyl-accepting chemotaxis sensory transducer  60.48 
 
 
567 aa  406  1.0000000000000001e-112  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2908  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  65.66 
 
 
561 aa  409  1.0000000000000001e-112  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.07018 
 
 
-
 
NC_009485  BBta_0885  putative methyl-accepting chemotaxis protein  62.69 
 
 
691 aa  408  1.0000000000000001e-112  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.493714  normal 
 
 
-
 
NC_009485  BBta_2368  putative methyl-accepting chemotaxis receptor/sensory transducer precursor  63.32 
 
 
561 aa  404  1e-111  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.280114 
 
 
-
 
NC_009485  BBta_2902  methyl-accepting chemotaxis sensory transducer  65.42 
 
 
563 aa  404  1e-111  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.32606  normal  0.0943242 
 
 
-
 
NC_007778  RPB_2653  methyl-accepting chemotaxis sensory transducer  60.26 
 
 
691 aa  404  1e-111  Rhodopseudomonas palustris HaA2  Bacteria  decreased coverage  0.00184965  normal  0.0777916 
 
 
-
 
NC_007778  RPB_3610  methyl-accepting chemotaxis sensory transducer  66.3 
 
 
563 aa  404  1e-111  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.735593  normal  0.400148 
 
 
-
 
NC_007925  RPC_4809  methyl-accepting chemotaxis sensory transducer  68.65 
 
 
563 aa  404  1e-111  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0336  chemotaxis sensory transducer  66.94 
 
 
563 aa  403  1e-111  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_1867  chemotaxis sensory transducer  62.37 
 
 
714 aa  405  1e-111  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.133032 
 
 
-
 
NC_007925  RPC_1709  methyl-accepting chemotaxis sensory transducer  59.08 
 
 
568 aa  397  1e-109  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.55655  normal  0.12205 
 
 
-
 
NC_009485  BBta_5044  methyl-accepting chemotaxis receptor/sensory transducer  42.66 
 
 
662 aa  399  1e-109  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.859604  normal 
 
 
-
 
NC_011004  Rpal_0233  methyl-accepting chemotaxis sensory transducer  65.14 
 
 
563 aa  394  1e-108  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2367  putative methyl-accepting chemotaxis receptor/sensory transducer precursor  65.17 
 
 
562 aa  391  1e-107  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.287749 
 
 
-
 
NC_007925  RPC_4527  methyl-accepting chemotaxis sensory transducer  52.65 
 
 
667 aa  387  1e-106  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.527831 
 
 
-
 
NC_009485  BBta_2799  putative receptor/sensory transducer  65.81 
 
 
707 aa  384  1e-105  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0655652  normal 
 
 
-
 
NC_009485  BBta_1536  methyl-accepting chemotaxis protein  67.33 
 
 
716 aa  383  1e-105  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.566253  normal  0.284447 
 
 
-
 
NC_007958  RPD_3581  methyl-accepting chemotaxis sensory transducer  58.67 
 
 
567 aa  380  1e-104  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0981346  normal  0.985512 
 
 
-
 
NC_009485  BBta_0330  putative methyl-accepting chemotaxis receptor/sensory transducer  57.85 
 
 
676 aa  377  1e-103  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0869057 
 
 
-
 
NC_007964  Nham_1045  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  58.09 
 
 
564 aa  374  1e-102  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_007406  Nwi_0530  methyl-accepting chemotaxis protein  59.12 
 
 
569 aa  371  1e-101  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.667624  normal 
 
 
-
 
NC_007643  Rru_A2554  methyl-accepting chemotaxis sensory transducer  38.07 
 
 
644 aa  370  1e-101  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.0186678  n/a   
 
 
-
 
NC_007778  RPB_0914  methyl-accepting chemotaxis sensory transducer  57.1 
 
 
689 aa  369  1e-101  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.497103 
 
 
-
 
NC_011004  Rpal_2142  methyl-accepting chemotaxis sensory transducer  71.48 
 
 
428 aa  372  1e-101  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.293169  n/a   
 
 
-
 
NC_007958  RPD_1025  methyl-accepting chemotaxis sensory transducer  52.84 
 
 
681 aa  372  1e-101  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_0575  methyl-accepting chemotaxis sensory transducer  57.43 
 
 
681 aa  372  1e-101  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_5144  methyl-accepting chemotaxis sensory transducer  55.5 
 
 
686 aa  364  3e-99  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_0061  methyl-accepting chemotaxis sensory transducer  54.67 
 
 
674 aa  363  8e-99  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_1716  methyl-accepting chemotaxis sensory transducer  56.49 
 
 
564 aa  360  4e-98  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0822312  normal  0.62395 
 
 
-
 
NC_007778  RPB_1030  methyl-accepting chemotaxis sensory transducer  61.35 
 
 
653 aa  345  1e-93  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007964  Nham_0772  methyl-accepting chemotaxis sensory transducer  56.28 
 
 
561 aa  328  1.0000000000000001e-88  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_4739  methyl-accepting chemotaxis sensory transducer  64.75 
 
 
450 aa  324  4e-87  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_2743  methyl-accepting chemotaxis sensory transducer  51.76 
 
 
579 aa  315  1.9999999999999998e-84  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.408122 
 
 
-
 
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