Gene RPC_4809 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4809 
Symbol 
ID3973513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp5367672 
End bp5369363 
Gene Length1692 bp 
Protein Length563 aa 
Translation table11 
GC content64% 
IMG OID637927921 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_534650 
Protein GI90426280 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTACTC ACCTCTCCAT TCGCGCCAAG ATCATCGTCG TCGTCGCAGT CCTGCTGGTC 
GCGATGACTG GCATGGGGCT TCTGGCGGTC ACCAAGATGC AGGCGATCAA CACCGCCGCC
GTCGAGATCC AGAGCGACTG GCTGCCGAGC GTTCGCGCCT TGGGCAATCT GCGCGCGGAA
GTGGTGACCT ATCGGGCCAT CGTGCGGCTG CACATCCTGT CCGAAACCGC GGAGGCCAAG
GCGGCAGTGG AAAAGCGCAT CGAAACCTCG GCGCAAGCGC TGCGGAAGTT TCGTGAGGCT
TACGAGCCGC TGATCACTTC GCCCGAGGAA CGCACGTTCT ACAAGGAATG GAGCCAACAA
TGGGCGCTTT ACGACGCCAG CCTCCCGCAG GTGCTGGCGC TGTCGCGCAA CAGCGTCGGC
CGAATTCCGC ACGAAGCCAC CGAGTTCAAC GAGACCAAGG CCTATCCGAT CTCGAAGAAG
GCCGACGTGA TTCTGGACAA TGATATCGCC TTCAACAACA GGGGCGCCGA TGCCGCCGGC
CATGCCGCCA GCGCCGCCTA TGAATCGGCC TTGATGCAGC TGTTGAGCAT CCTCGGCATC
GCCATGCTGG CAGGTGGCGC GCTGGCGATC TATCTGGTGC GCGACGTCAC GAGCGGCATC
GCCTCGATCG TCAAACCGAT GCAGGCGCTG GGTCGCGGCG ACCTTTCGGC CGAGGTGCCG
CATCAGGGCG AACGCAACGA AATCGGCTCG ATGGCCGATA CGTTGCAGGT GTTCAAAACG
GCGCTGATCG CCAAGAAGGC CGCCGACGAG GCGGCGATGC TCGACGCCAA CACCAAGATC
GAACGCGGTC GCCGGGTCGA TACCATCACC CAGAAATTCG AATCGCAGAT CGGCGAACTG
GTCGAGTCGC TGTCGTCGTC GTCCACCGAG CTCGAGGCCT CCGCCGGCAC CCTGACCGCC
ACCGCGGCCC GCGCCCAGGA ACTGACCATT TTGGTCGCGG CGGCTTCGGA AGAAGCCTCC
ACCAATGTGC AGTCGGTCGC CTCCGCGACC GAGGAGATGA GCTCGTCGGT CAACGAGATC
AGCCGCCAGG TGCAGGAATC CGCGCGGATC GCCAATGAGG CGGTGGACCA GGCGAAGAAG
ACCAATGATC GGGTCGGTGA GCTGGCCAAG GCCGCAGCCC GGATCGGCGA CGTCGTCGAA
CTGATCAATA CCATTGCCGG GCAGACCAAC CTGCTGGCCT TGAACGCGAC CATCGAGGCC
GCCCGCGCCG GCGACGCCGG CCGCGGTTTT GCGGTGGTGG CCTCCGAAGT CAAGGCACTG
GCCGAGCAGA CCGCCAAAGC TACCGGCGAG ATCAGCCAGC AGATCTCAGG CATCCAAGCC
GCAACCCAAG AATCGGTGGG AGCGATCCAG GAGATCGGCG TCACCATCGG CCGGATGTCG
GAGATTTCCT CGACCATCGC CTCGGCGGTC GAAGAACAGG GCGCCGCCAC CCAGGAGATT
TCCCGTAACG TGCAGCAGGC GGCGCAAGGC ACCCAGCAGG TCAGTTCCAA CATCACCGAC
GTGCAACACG GCGCCAGCGA AACCGGCTCG GCGTCGGCGC AGGTGCTGTC CGCCGCAAAA
TCGCTGTCGA GCGACAGCAG CCTGCTGAAG CTCGAAGTCG GCCAGTTTCT GCAGTCGCTA
CGCGCCGCTT AG
 
Protein sequence
MFTHLSIRAK IIVVVAVLLV AMTGMGLLAV TKMQAINTAA VEIQSDWLPS VRALGNLRAE 
VVTYRAIVRL HILSETAEAK AAVEKRIETS AQALRKFREA YEPLITSPEE RTFYKEWSQQ
WALYDASLPQ VLALSRNSVG RIPHEATEFN ETKAYPISKK ADVILDNDIA FNNRGADAAG
HAASAAYESA LMQLLSILGI AMLAGGALAI YLVRDVTSGI ASIVKPMQAL GRGDLSAEVP
HQGERNEIGS MADTLQVFKT ALIAKKAADE AAMLDANTKI ERGRRVDTIT QKFESQIGEL
VESLSSSSTE LEASAGTLTA TAARAQELTI LVAAASEEAS TNVQSVASAT EEMSSSVNEI
SRQVQESARI ANEAVDQAKK TNDRVGELAK AAARIGDVVE LINTIAGQTN LLALNATIEA
ARAGDAGRGF AVVASEVKAL AEQTAKATGE ISQQISGIQA ATQESVGAIQ EIGVTIGRMS
EISSTIASAV EEQGAATQEI SRNVQQAAQG TQQVSSNITD VQHGASETGS ASAQVLSAAK
SLSSDSSLLK LEVGQFLQSL RAA