Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_4809 |
Symbol | |
ID | 3973513 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 5367672 |
End bp | 5369363 |
Gene Length | 1692 bp |
Protein Length | 563 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637927921 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_534650 |
Protein GI | 90426280 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTACTC ACCTCTCCAT TCGCGCCAAG ATCATCGTCG TCGTCGCAGT CCTGCTGGTC GCGATGACTG GCATGGGGCT TCTGGCGGTC ACCAAGATGC AGGCGATCAA CACCGCCGCC GTCGAGATCC AGAGCGACTG GCTGCCGAGC GTTCGCGCCT TGGGCAATCT GCGCGCGGAA GTGGTGACCT ATCGGGCCAT CGTGCGGCTG CACATCCTGT CCGAAACCGC GGAGGCCAAG GCGGCAGTGG AAAAGCGCAT CGAAACCTCG GCGCAAGCGC TGCGGAAGTT TCGTGAGGCT TACGAGCCGC TGATCACTTC GCCCGAGGAA CGCACGTTCT ACAAGGAATG GAGCCAACAA TGGGCGCTTT ACGACGCCAG CCTCCCGCAG GTGCTGGCGC TGTCGCGCAA CAGCGTCGGC CGAATTCCGC ACGAAGCCAC CGAGTTCAAC GAGACCAAGG CCTATCCGAT CTCGAAGAAG GCCGACGTGA TTCTGGACAA TGATATCGCC TTCAACAACA GGGGCGCCGA TGCCGCCGGC CATGCCGCCA GCGCCGCCTA TGAATCGGCC TTGATGCAGC TGTTGAGCAT CCTCGGCATC GCCATGCTGG CAGGTGGCGC GCTGGCGATC TATCTGGTGC GCGACGTCAC GAGCGGCATC GCCTCGATCG TCAAACCGAT GCAGGCGCTG GGTCGCGGCG ACCTTTCGGC CGAGGTGCCG CATCAGGGCG AACGCAACGA AATCGGCTCG ATGGCCGATA CGTTGCAGGT GTTCAAAACG GCGCTGATCG CCAAGAAGGC CGCCGACGAG GCGGCGATGC TCGACGCCAA CACCAAGATC GAACGCGGTC GCCGGGTCGA TACCATCACC CAGAAATTCG AATCGCAGAT CGGCGAACTG GTCGAGTCGC TGTCGTCGTC GTCCACCGAG CTCGAGGCCT CCGCCGGCAC CCTGACCGCC ACCGCGGCCC GCGCCCAGGA ACTGACCATT TTGGTCGCGG CGGCTTCGGA AGAAGCCTCC ACCAATGTGC AGTCGGTCGC CTCCGCGACC GAGGAGATGA GCTCGTCGGT CAACGAGATC AGCCGCCAGG TGCAGGAATC CGCGCGGATC GCCAATGAGG CGGTGGACCA GGCGAAGAAG ACCAATGATC GGGTCGGTGA GCTGGCCAAG GCCGCAGCCC GGATCGGCGA CGTCGTCGAA CTGATCAATA CCATTGCCGG GCAGACCAAC CTGCTGGCCT TGAACGCGAC CATCGAGGCC GCCCGCGCCG GCGACGCCGG CCGCGGTTTT GCGGTGGTGG CCTCCGAAGT CAAGGCACTG GCCGAGCAGA CCGCCAAAGC TACCGGCGAG ATCAGCCAGC AGATCTCAGG CATCCAAGCC GCAACCCAAG AATCGGTGGG AGCGATCCAG GAGATCGGCG TCACCATCGG CCGGATGTCG GAGATTTCCT CGACCATCGC CTCGGCGGTC GAAGAACAGG GCGCCGCCAC CCAGGAGATT TCCCGTAACG TGCAGCAGGC GGCGCAAGGC ACCCAGCAGG TCAGTTCCAA CATCACCGAC GTGCAACACG GCGCCAGCGA AACCGGCTCG GCGTCGGCGC AGGTGCTGTC CGCCGCAAAA TCGCTGTCGA GCGACAGCAG CCTGCTGAAG CTCGAAGTCG GCCAGTTTCT GCAGTCGCTA CGCGCCGCTT AG
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Protein sequence | MFTHLSIRAK IIVVVAVLLV AMTGMGLLAV TKMQAINTAA VEIQSDWLPS VRALGNLRAE VVTYRAIVRL HILSETAEAK AAVEKRIETS AQALRKFREA YEPLITSPEE RTFYKEWSQQ WALYDASLPQ VLALSRNSVG RIPHEATEFN ETKAYPISKK ADVILDNDIA FNNRGADAAG HAASAAYESA LMQLLSILGI AMLAGGALAI YLVRDVTSGI ASIVKPMQAL GRGDLSAEVP HQGERNEIGS MADTLQVFKT ALIAKKAADE AAMLDANTKI ERGRRVDTIT QKFESQIGEL VESLSSSSTE LEASAGTLTA TAARAQELTI LVAAASEEAS TNVQSVASAT EEMSSSVNEI SRQVQESARI ANEAVDQAKK TNDRVGELAK AAARIGDVVE LINTIAGQTN LLALNATIEA ARAGDAGRGF AVVASEVKAL AEQTAKATGE ISQQISGIQA ATQESVGAIQ EIGVTIGRMS EISSTIASAV EEQGAATQEI SRNVQQAAQG TQQVSSNITD VQHGASETGS ASAQVLSAAK SLSSDSSLLK LEVGQFLQSL RAA
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