Gene BBta_0575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0575 
Symbol 
ID5156057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp580749 
End bp582794 
Gene Length2046 bp 
Protein Length681 aa 
Translation table11 
GC content67% 
IMG OID640555586 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_001236759 
Protein GI148252174 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGAATGT CTGCGCATCT GGCGCCGCAG TCGCGGCGTG GCAATTTTCT GACCCTGCGT 
TTCCGTGCCA AGATCTTTCT CGGCTTCGCG GTCGTGCTGG CGATCTCTGC GGCCAGCATC
GGGTTCGCCT ATCTCGGGTT CGAGAAGGTC GCGGCCGCCG TCGCCTCCTA TCGGGCCAGT
GTCTCCGAGG CCGATGCGGC CAGAACCATC GACCGGGAGC TCATCTCCTA CCAGGCGCTC
GCGCGCTATT TTGCCCTGAC CGGCAAGCCC GAGGACGAGG CCGCCGCGAT GGCAGCGCAG
CAGTCGCTGC TGGCGGCGAT CGACAAGTCG CTGGCGGCCG CCAGCGCCGC GGAGCGGCGG
GCGCAGCTCG GCAAGCTGCA GGCGCAGTTT CAGACCTTCG CCAAGATCTT CTCCGAGATC
GCCAACCTGA CCCGCGACAA TGCCAAGCTG GCCACCGACC AGATCGGCAT CGTCGGCAAC
AAGATCCGCT ATAAGTTCGA CGATCTGGCC GATACGGCCG CGCTCGCCGG CCTGCCGACC
GTGCAGACCA CCGCCAAGGA CCTGACCGGT CAGTATCTGA CCGCCTCCGC GCTGGTCGGC
ACGTTCATCG CGAAACCCGA TCCGAAGACG GCCGATGGGG CCATCGCACG GACGCGCTTC
CTGGAGACGT CGCTGGTCAC GATCTACGCC AATGACGAGA AGGTGACGCA GCGTGTCACC
GAACTCGGTG ACCTCATCAA GCAGTACCGC GCCGCCTTCA TCAAATTCGC GGACAATTCC
AAGGCGCTGG CGAAACTGGT CCAGGACATG GGCACCGCGG CCACCGAGAT CCTCGGTCTG
TCCAACGGGC TGCGATCGGA CCTTGCCGCC GACCAGCAGC GCATCGAGTC CGCCACCAAT
GCCACCATCG CCGAGATCGA GCGGCTGATC GCGATCCTGG CCGTCGGTGG CCTTGCCCTT
GGCGCCGCGC TGGCCTTGAT GCTCGGCAAC GGCATCTCCA AGCCGATGAT CACGATGTGC
AAGGCGATGC GCGAGCTCGC CTCCGGCAAT TTCGATGTGC GCCTGCCGGG GCTCGGCCGC
GCCGACGAGA TCGGCGAGAT GGCCGCTGCC GTCGAGGAGT TCAAGGTTCA GGCCGTGGCG
AAGGCCGAGC GCGACGCCGC GACCCAGGAT GCCCAGAACA AGGCCGCCGG CGCGGCGCGC
CGGGCCGAGC TGATCCGTTT TGCCGACGAA TTCGAGGCTG CGGTCGGCTC CATCGTGTCC
AACGTGTCGA GCTCTGCGGA GCAGCTCGAA CATGCCGCCT CCACCCTGAC CAGGACCGCG
GAAACCACCC AGTCGCTGGC CAGCCGGGTC AGCGGCACCT CGGACCAGGC CGCAGGCCGG
ATCCACTCGG TCGCCAGTGC GACCGACGAG CTGTCGGCCT CGGTCAGCGA GATCGGACGA
CAGGTCCGCG AGTCCAACCG CATCGCCGAA TCCGCGGTGA GCCAGGCCGA GGAGACCGAC
GGACGCATCG GCAAGCTGTC GCGGGCGGCG CAGGAGATCG GGGACGTCGT CAAGCTGATC
ACGGCGATCG CCGAGCAGAC CAACCTTCTG GCGCTGAATG CCACCATCGA GGCGGCGCGG
GCCGGGGATG CCGGCCGCGG CTTCGCGGTC GTCGCCTCCG AGGTCAAGTC GCTGGCCGAG
CAGACCGCCA AGGCGACCGA TGACATCTCC AACCATATCT CCGGCATGCA GGCTGCGACC
CAGGAGTCGG TGACCGCGAT CAAGCAGATC GGCGGCACGA TTCGCCAGAT CTCCACGATC
GCCTCGTCGA TTGCGACCGC CGTCGAGCAG CAGGGTGGCG CGACCCAGGA GATCGCGAGG
AACGTACAGA GCGTCGCGGC CGGCACGCAG GCCGCGGCTT CCGATATCAC CGAGGTCAAT
CGCGGCGCGA CGCAAACGGG CGAGGCTTCG GAAGAGGTGC TGCGCTCGGC CAAGTCGCTG
TCGTCGCAGA GCGCAAGGCT GCGCGAGGAG CTCAACCGCT TCATGGCGAA TATTCGCGCG
GCATAG
 
Protein sequence
MGMSAHLAPQ SRRGNFLTLR FRAKIFLGFA VVLAISAASI GFAYLGFEKV AAAVASYRAS 
VSEADAARTI DRELISYQAL ARYFALTGKP EDEAAAMAAQ QSLLAAIDKS LAAASAAERR
AQLGKLQAQF QTFAKIFSEI ANLTRDNAKL ATDQIGIVGN KIRYKFDDLA DTAALAGLPT
VQTTAKDLTG QYLTASALVG TFIAKPDPKT ADGAIARTRF LETSLVTIYA NDEKVTQRVT
ELGDLIKQYR AAFIKFADNS KALAKLVQDM GTAATEILGL SNGLRSDLAA DQQRIESATN
ATIAEIERLI AILAVGGLAL GAALALMLGN GISKPMITMC KAMRELASGN FDVRLPGLGR
ADEIGEMAAA VEEFKVQAVA KAERDAATQD AQNKAAGAAR RAELIRFADE FEAAVGSIVS
NVSSSAEQLE HAASTLTRTA ETTQSLASRV SGTSDQAAGR IHSVASATDE LSASVSEIGR
QVRESNRIAE SAVSQAEETD GRIGKLSRAA QEIGDVVKLI TAIAEQTNLL ALNATIEAAR
AGDAGRGFAV VASEVKSLAE QTAKATDDIS NHISGMQAAT QESVTAIKQI GGTIRQISTI
ASSIATAVEQ QGGATQEIAR NVQSVAAGTQ AAASDITEVN RGATQTGEAS EEVLRSAKSL
SSQSARLREE LNRFMANIRA A