| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1030 |
|---|
| Symbol | |
|---|
| ID | 3909154 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 1182159 |
|---|
| End bp | 1184120 |
|---|
| Gene Length | 1962 bp |
|---|
| Protein Length | 653 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637882923 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_484651 |
|---|
| Protein GI | 86748155 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCTTC GTACGCGCAT CACGCTCGCT TTGATCGCCG CTTCGGTGCT GACCGCGGCC
GTCCTGCTGA TCGGATCGAT CACCACCATC AGCGACATCA TCCGCCGCGC CGACGACCGC
GAACTACGCG GCCACTACGA TGCGGTGATC TCACAGCTCG CGCAGGAGGC CCGGCAGGCG
GCGGCGATGA GCGCCGTCGT CGCCGCGATG CCGGCTGCGC AGCAGGCTCT GGCGCGTCGC
GACCGCCAGG GGTTGTTCGA CCTCTTCCTG GCGGGCTTTC CGTTTCTCAA GTCGCAATAC
GGCGTCGATC AGTTCCAGTT CCACGTTCCG CCGGCGACGT CGTTCGCCCG CATCCACCAG
GCCCAGAAAT TCGGCGACGA CCTGTCGGGC TTCCGCAAGA CGGTGGTCGA GGCCAATCGC
GACCGCAAGG CGATCGTCGG TCTGGAGTCG GGCGTCGCCG GACTCGGCAT CCGCGGCGTG
GTGCCGGTGG CGCACGACGG CAAACATGCC GGCACGGTCG AATTCGGCCT GACCTTCGGC
CAGGGCTTCT TCGACAAGTT CAAGCAGGAG CGGGGCGTCG ATGTCGCCCT GCATCTGAGC
AAGCCCGACG GCTCGGTCGC CGCGCCAGTC GGCACGATCC GCGGCCCGAG CTTCTTCACC
CCCGCCGAGA TCCGGAAGTC CGCGGGCGGC GCGGTGACGA CCCGTCAGGC CGACGACGCC
AGCGGCAAGC CGATGGCGAT GCTGCTCGGC CCGGTCAAGG ACTTCTCCGG CCATCCGATC
GGCGCGCTCG AAATCGCGAT GGACAACAGC GAATATGCCG CCGCCACCAG CAACGCCTAT
CTGCTCGCCA TCCTCGCCTC GGTGGGAGCC CTGGTGCTGG CCGCGATCAC CGGCTTCATC
ATCGCCGGCG GCATCTCGCG GCCGATCCTG TCGCTGTGCG AGGCGATGCG CGGCCTCGCC
GGCGGCGATC TGTCGATTGC GCTGCCGCCG CTGAAACGAA AGGACGAGGT CGGCCAGATG
ATCGACGCGG TCGGCGTCTT CCGCGAGAGC ATGATCGAAA CCGAGCGGCT GCGCGCCGAT
CAGGCCGAAG CGGCGCGGCG GCAGGCGGCA CAGCGCCGCG ACGAGATGCA CGGCCTCGCC
GAGTCGTTCG AGGCGGCGGT CGGCCGCATC GTCGAGACGG TGTCGTCGGC CTCGACCGAA
CTCGAAGCCT CCGCCGGCGC GCTGACCGCC ACCGCCGACC GCTCGCTCGA CATCGCCACC
GCGGTCGCGG CGGCGTCGGA GGAAGCGTCC ACCAACGTCC AATCGGTCGC CTCCGCCACC
GAGGAGATGA CCTCGTCGGT CGGCGAGATC GGCCGCCAGG TCCGGGAATC GGCGCAGATC
GCCCGCGACG CGGTGAGCCA GGCCGAGACC ACCAACGCCC ACGTCGCCGA ACTGTCGCGC
GCCGCCGCAC AGATCGAATC CGTCGTCGAG CTGATCAACA AGATCGCCGG CCAGACCAAT
CTGCTGGCGC TCAACGCCAC CATCGAGGCG GCGCGCGCCG GCGAGGCCGG CCGCGGCTTC
GCCGTGGTCG CCGCCGAGGT CAAGGCGCTG GCCGAGCAGA CCGCGACCGC CACCAGCGAC
ATCGCCCGCT ACGTCGGCAG CATCCAGAGC GCGACCGGCG AGTCGGTGGC GTCGATCGGT
TCGATCGGCC AGACCATCAA CCGGCTGTCG GAGATCGCGG CCGCGATCGC GTCGGCGGTC
GAACAGCAGG GCGTCGCCAC CAGGGAAATC TCGCGCAATG TCCACCACGC CGCCGAGGGC
ACCCATCAGG TCACCGTCAA CATCGCCGAG GTTCAGCGCG GCGCCACCGA GACCGAACTC
GCCTCCACCA GCGTGCTGGC GGCGGCGCAT TCGCTGTCGG AAGAGAGCAA CGCCCTGAAA
AAGGAAGTCG AGCACTTCCT GCATTCGATC CGCGCCGCCT GA
|
|---|
| Protein sequence | MSLRTRITLA LIAASVLTAA VLLIGSITTI SDIIRRADDR ELRGHYDAVI SQLAQEARQA
AAMSAVVAAM PAAQQALARR DRQGLFDLFL AGFPFLKSQY GVDQFQFHVP PATSFARIHQ
AQKFGDDLSG FRKTVVEANR DRKAIVGLES GVAGLGIRGV VPVAHDGKHA GTVEFGLTFG
QGFFDKFKQE RGVDVALHLS KPDGSVAAPV GTIRGPSFFT PAEIRKSAGG AVTTRQADDA
SGKPMAMLLG PVKDFSGHPI GALEIAMDNS EYAAATSNAY LLAILASVGA LVLAAITGFI
IAGGISRPIL SLCEAMRGLA GGDLSIALPP LKRKDEVGQM IDAVGVFRES MIETERLRAD
QAEAARRQAA QRRDEMHGLA ESFEAAVGRI VETVSSASTE LEASAGALTA TADRSLDIAT
AVAAASEEAS TNVQSVASAT EEMTSSVGEI GRQVRESAQI ARDAVSQAET TNAHVAELSR
AAAQIESVVE LINKIAGQTN LLALNATIEA ARAGEAGRGF AVVAAEVKAL AEQTATATSD
IARYVGSIQS ATGESVASIG SIGQTINRLS EIAAAIASAV EQQGVATREI SRNVHHAAEG
THQVTVNIAE VQRGATETEL ASTSVLAAAH SLSEESNALK KEVEHFLHSI RAA
|
|---|
| |