More than 300 homologs were found in PanDaTox collection
for query gene Rpal_5120 on replicon NC_011004
Organism: Rhodopseudomonas palustris TIE-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011004  Rpal_5119  methyl-accepting chemotaxis sensory transducer  72.65 
 
 
563 aa  768    Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_5120  methyl-accepting chemotaxis sensory transducer  100 
 
 
563 aa  1114    Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_0489  methyl-accepting chemotaxis sensory transducer  70.04 
 
 
564 aa  716    Rhodopseudomonas palustris HaA2  Bacteria  normal  0.301128  normal 
 
 
-
 
NC_007778  RPB_3610  methyl-accepting chemotaxis sensory transducer  62.88 
 
 
563 aa  649    Rhodopseudomonas palustris HaA2  Bacteria  normal  0.735593  normal  0.400148 
 
 
-
 
NC_007778  RPB_4286  methyl-accepting chemotaxis sensory transducer  61.1 
 
 
563 aa  657    Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_3377  methyl-accepting chemotaxis sensory transducer  61.63 
 
 
563 aa  669    Rhodopseudomonas palustris BisB18  Bacteria  normal  0.528008  normal 
 
 
-
 
NC_007925  RPC_3378  methyl-accepting chemotaxis sensory transducer  66.79 
 
 
563 aa  714    Rhodopseudomonas palustris BisB18  Bacteria  normal  0.104618  normal 
 
 
-
 
NC_009485  BBta_2368  putative methyl-accepting chemotaxis receptor/sensory transducer precursor  61.92 
 
 
561 aa  664    Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.280114 
 
 
-
 
NC_007958  RPD_0336  chemotaxis sensory transducer  70.52 
 
 
563 aa  726    Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0337  chemotaxis sensory transducer  71.23 
 
 
563 aa  755    Rhodopseudomonas palustris BisB5  Bacteria  normal  0.760858  normal  0.789667 
 
 
-
 
NC_007958  RPD_1857  chemotaxis sensory transducer  64.12 
 
 
563 aa  694    Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_1830  methyl-accepting chemotaxis sensory transducer  67.14 
 
 
563 aa  711    Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_4580  methyl-accepting chemotaxis sensory transducer  60.75 
 
 
563 aa  627  1e-178  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.174371  normal 
 
 
-
 
NC_009485  BBta_2902  methyl-accepting chemotaxis sensory transducer  61.1 
 
 
563 aa  621  1e-177  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.32606  normal  0.0943242 
 
 
-
 
NC_009485  BBta_2367  putative methyl-accepting chemotaxis receptor/sensory transducer precursor  62.1 
 
 
562 aa  615  1e-175  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.287749 
 
 
-
 
NC_007925  RPC_4809  methyl-accepting chemotaxis sensory transducer  61.81 
 
 
563 aa  612  9.999999999999999e-175  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007964  Nham_0772  methyl-accepting chemotaxis sensory transducer  55.6 
 
 
561 aa  530  1e-149  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_0969  methyl-accepting chemotaxis sensory transducer  52.38 
 
 
562 aa  509  1e-143  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.956339  normal  0.570918 
 
 
-
 
NC_007925  RPC_2742  methyl-accepting chemotaxis sensory transducer  54.09 
 
 
560 aa  482  1e-135  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.429688 
 
 
-
 
NC_007925  RPC_3380  methyl-accepting chemotaxis sensory transducer  69.54 
 
 
567 aa  456  1e-127  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.689596 
 
 
-
 
NC_007778  RPB_4280  methyl-accepting chemotaxis sensory transducer  73.3 
 
 
563 aa  454  1.0000000000000001e-126  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_1795  methyl-accepting chemotaxis sensory transducer  66.26 
 
 
561 aa  451  1e-125  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.432423  normal  0.0230577 
 
 
-
 
NC_007925  RPC_4407  methyl-accepting chemotaxis sensory transducer  67.29 
 
 
566 aa  449  1e-125  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.365939 
 
 
-
 
NC_007958  RPD_1918  chemotaxis sensory transducer  60.82 
 
 
688 aa  449  1e-125  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.537222 
 
 
-
 
NC_009485  BBta_6635  methyl-accepting chemotaxis protein  60 
 
 
565 aa  446  1.0000000000000001e-124  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.459746  normal  0.104137 
 
 
-
 
NC_007778  RPB_0192  methyl-accepting chemotaxis sensory transducer  68.18 
 
 
688 aa  445  1.0000000000000001e-124  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_3598  methyl-accepting chemotaxis sensory transducer  52.76 
 
 
672 aa  446  1.0000000000000001e-124  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_0065  chemotaxis sensory transducer  68 
 
 
688 aa  448  1.0000000000000001e-124  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0714339 
 
 
-
 
NC_007778  RPB_2358  methyl-accepting chemotaxis sensory transducer  55.1 
 
 
673 aa  443  1e-123  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.207811 
 
 
-
 
NC_011004  Rpal_2757  methyl-accepting chemotaxis sensory transducer  67.82 
 
 
561 aa  442  1e-123  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0630329  n/a   
 
 
-
 
NC_007925  RPC_3161  methyl-accepting chemotaxis sensory transducer  59.75 
 
 
731 aa  445  1e-123  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.072786  normal 
 
 
-
 
NC_007778  RPB_2250  methyl-accepting chemotaxis sensory transducer  63.9 
 
 
670 aa  439  9.999999999999999e-123  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_3545  methyl-accepting chemotaxis sensory transducer  66.4 
 
 
689 aa  439  9.999999999999999e-123  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.457552  normal  0.598514 
 
 
-
 
NC_007778  RPB_2983  methyl-accepting chemotaxis sensory transducer  63.5 
 
 
561 aa  438  1e-121  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.0323515 
 
 
-
 
NC_007925  RPC_4406  methyl-accepting chemotaxis sensory transducer  66.76 
 
 
566 aa  436  1e-121  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.341232 
 
 
-
 
NC_007958  RPD_3547  chemotaxis sensory transducer  51.04 
 
 
566 aa  435  1e-121  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_2025  methyl-accepting chemotaxis sensory transducer  66.4 
 
 
688 aa  434  1e-120  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0110809  n/a   
 
 
-
 
NC_009485  BBta_4269  putative methyl-accepting chemotaxis receptor/sensory transducer protein  72.41 
 
 
691 aa  434  1e-120  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.35374 
 
 
-
 
NC_007925  RPC_3379  methyl-accepting chemotaxis sensory transducer  62.85 
 
 
587 aa  432  1e-120  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.787169  normal 
 
 
-
 
NC_007958  RPD_2465  chemotaxis sensory transducer  66.15 
 
 
561 aa  433  1e-120  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.5909  normal  0.697276 
 
 
-
 
NC_009485  BBta_6483  methyl-accepting chemotaxis protein  49.48 
 
 
565 aa  429  1e-119  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.877741  normal 
 
 
-
 
NC_007778  RPB_2961  methyl-accepting chemotaxis sensory transducer  69.17 
 
 
563 aa  431  1e-119  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_3804  methyl-accepting chemotaxis sensory transducer  68.35 
 
 
655 aa  430  1e-119  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.772812  normal 
 
 
-
 
NC_011004  Rpal_1871  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  48.02 
 
 
716 aa  427  1e-118  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2904  putative methyl-accepting chemotaxis protein  51.73 
 
 
568 aa  423  1e-117  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.481458  normal  0.283558 
 
 
-
 
NC_009485  BBta_0885  putative methyl-accepting chemotaxis protein  64.21 
 
 
691 aa  425  1e-117  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.493714  normal 
 
 
-
 
NC_007958  RPD_3107  chemotaxis sensory transducer  65.44 
 
 
674 aa  425  1e-117  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0664997 
 
 
-
 
NC_009485  BBta_1388  methyl-accepting chemotaxis sensory transducer  50.95 
 
 
656 aa  419  1e-116  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0527529  normal  0.207734 
 
 
-
 
NC_009485  BBta_4464  methyl-accepting chemotaxis sensory transducer  64.56 
 
 
573 aa  419  1e-116  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.610641  normal  0.757777 
 
 
-
 
NC_007958  RPD_0995  chemotaxis sensory transducer  60.39 
 
 
656 aa  419  1e-116  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.880627  normal 
 
 
-
 
NC_009485  BBta_2901  methyl-accepting chemotaxis sensory transducer  67.43 
 
 
674 aa  417  9.999999999999999e-116  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.14772  normal  0.22504 
 
 
-
 
NC_009485  BBta_2799  putative receptor/sensory transducer  71.26 
 
 
707 aa  418  9.999999999999999e-116  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0655652  normal 
 
 
-
 
NC_009485  BBta_2905  putative methyl-accepting chemotaxis protein  62.99 
 
 
542 aa  417  9.999999999999999e-116  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.234112  normal  0.211145 
 
 
-
 
NC_011004  Rpal_5172  methyl-accepting chemotaxis sensory transducer  58.49 
 
 
656 aa  410  1e-113  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_4941  methyl-accepting chemotaxis sensory transducer  69.13 
 
 
563 aa  409  1e-113  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.396774  n/a   
 
 
-
 
NC_007778  RPB_2653  methyl-accepting chemotaxis sensory transducer  63.41 
 
 
691 aa  411  1e-113  Rhodopseudomonas palustris HaA2  Bacteria  decreased coverage  0.00184965  normal  0.0777916 
 
 
-
 
NC_007958  RPD_0994  chemotaxis sensory transducer  54.82 
 
 
656 aa  409  1e-113  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.357708  normal 
 
 
-
 
NC_007925  RPC_1843  methyl-accepting chemotaxis sensory transducer  59.01 
 
 
568 aa  406  1.0000000000000001e-112  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.618754 
 
 
-
 
NC_007925  RPC_2149  methyl-accepting chemotaxis sensory transducer  56.79 
 
 
675 aa  408  1.0000000000000001e-112  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.0391093 
 
 
-
 
NC_009485  BBta_2903  methyl-accepting chemotaxis sensory transducer  56.13 
 
 
568 aa  407  1.0000000000000001e-112  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.335645  normal  0.0996392 
 
 
-
 
NC_007958  RPD_0153  chemotaxis sensory transducer  64.52 
 
 
602 aa  403  1e-111  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0497  chemotaxis sensory transducer  52.26 
 
 
577 aa  403  1e-111  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_6717  methyl-accepting chemotaxis sensory transducer  62.6 
 
 
741 aa  400  9.999999999999999e-111  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.447835  normal  0.587139 
 
 
-
 
NC_007925  RPC_4101  methyl-accepting chemotaxis sensory transducer  67.69 
 
 
698 aa  400  9.999999999999999e-111  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_1867  chemotaxis sensory transducer  58.97 
 
 
714 aa  399  9.999999999999999e-111  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.133032 
 
 
-
 
NC_007925  RPC_2744  methyl-accepting chemotaxis sensory transducer  62.6 
 
 
572 aa  397  1e-109  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.696609  normal  0.585687 
 
 
-
 
NC_011004  Rpal_4783  methyl-accepting chemotaxis sensory transducer  62.26 
 
 
730 aa  397  1e-109  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1321  methyl-accepting chemotaxis sensory transducer  64.55 
 
 
730 aa  391  1e-107  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0177086  normal  0.260794 
 
 
-
 
NC_007925  RPC_1253  methyl-accepting chemotaxis sensory transducer  68.33 
 
 
567 aa  390  1e-107  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.010155 
 
 
-
 
NC_011004  Rpal_4118  methyl-accepting chemotaxis sensory transducer  59.9 
 
 
567 aa  390  1e-107  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2908  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  63.49 
 
 
561 aa  382  1e-105  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.07018 
 
 
-
 
NC_010725  Mpop_0581  methyl-accepting chemotaxis sensory transducer  43.26 
 
 
562 aa  384  1e-105  Methylobacterium populi BJ001  Bacteria  normal  0.0281709  decreased coverage  0.00474558 
 
 
-
 
NC_009485  BBta_2906  putative methyl-accepting chemotaxis protein  61.76 
 
 
564 aa  379  1e-104  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.430156  normal  0.106702 
 
 
-
 
NC_009485  BBta_7508  putative methyl-accepting chemotaxis protein (with a HAMP region)  62.39 
 
 
552 aa  379  1e-104  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.692825  normal 
 
 
-
 
NC_009485  BBta_2900  putative methyl-accepting chemotaxis receptor/sensory transducer (chemoreceptor)  63.24 
 
 
675 aa  377  1e-103  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.142675  normal  0.173139 
 
 
-
 
NC_009485  BBta_2907  putative methyl-accepting chemotaxis protein  68.75 
 
 
556 aa  376  1e-103  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.835875  normal  0.0729634 
 
 
-
 
NC_007643  Rru_A1293  methyl-accepting chemotaxis sensory transducer  41.61 
 
 
562 aa  372  1e-102  Rhodospirillum rubrum ATCC 11170  Bacteria  decreased coverage  0.00511002  n/a   
 
 
-
 
NC_009485  BBta_1536  methyl-accepting chemotaxis protein  65.62 
 
 
716 aa  362  9e-99  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.566253  normal  0.284447 
 
 
-
 
NC_007964  Nham_1045  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  57.85 
 
 
564 aa  360  5e-98  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_007406  Nwi_2996  methyl-accepting chemotaxis protein  58.76 
 
 
698 aa  359  7e-98  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_2544  methyl-accepting chemotaxis sensory transducer  44.25 
 
 
566 aa  358  9.999999999999999e-98  Methylobacterium sp. 4-46  Bacteria  normal  0.476321  normal 
 
 
-
 
NC_007964  Nham_1080  methyl-accepting chemotaxis sensory transducer  53.02 
 
 
698 aa  357  3.9999999999999996e-97  Nitrobacter hamburgensis X14  Bacteria  normal  0.0139762  n/a   
 
 
-
 
NC_011004  Rpal_2142  methyl-accepting chemotaxis sensory transducer  72.32 
 
 
428 aa  356  5e-97  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.293169  n/a   
 
 
-
 
NC_011004  Rpal_4271  methyl-accepting chemotaxis sensory transducer  47.27 
 
 
567 aa  355  8.999999999999999e-97  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_3471  methyl-accepting chemotaxis sensory transducer  44.12 
 
 
561 aa  355  2e-96  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.130295  normal 
 
 
-
 
NC_007925  RPC_2457  methyl-accepting chemotaxis sensory transducer  56.95 
 
 
665 aa  350  5e-95  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.0375918  normal  0.509707 
 
 
-
 
NC_007958  RPD_3581  methyl-accepting chemotaxis sensory transducer  43.06 
 
 
567 aa  350  5e-95  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0981346  normal  0.985512 
 
 
-
 
NC_010172  Mext_3147  chemotaxis sensory transducer  43.77 
 
 
561 aa  349  6e-95  Methylobacterium extorquens PA1  Bacteria  normal  0.0908078  normal 
 
 
-
 
NC_007406  Nwi_0530  methyl-accepting chemotaxis protein  69.37 
 
 
569 aa  345  2e-93  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.667624  normal 
 
 
-
 
NC_007925  RPC_1709  methyl-accepting chemotaxis sensory transducer  54.16 
 
 
568 aa  344  2e-93  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.55655  normal  0.12205 
 
 
-
 
NC_011004  Rpal_0233  methyl-accepting chemotaxis sensory transducer  47.02 
 
 
563 aa  344  2.9999999999999997e-93  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_0252  methyl-accepting chemotaxis sensory transducer  44.31 
 
 
562 aa  342  7e-93  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_5243  methyl-accepting chemotaxis sensory transducer  44.89 
 
 
562 aa  340  2.9999999999999998e-92  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A3563  chemotaxis sensory transducer  41.54 
 
 
563 aa  339  9e-92  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_2047  methyl-accepting chemotaxis sensory transducer  43.56 
 
 
562 aa  337  3.9999999999999995e-91  Methylobacterium populi BJ001  Bacteria  normal  normal  0.759486 
 
 
-
 
NC_010725  Mpop_3344  methyl-accepting chemotaxis sensory transducer  42.28 
 
 
561 aa  334  3e-90  Methylobacterium populi BJ001  Bacteria  normal  0.828703  normal 
 
 
-
 
NC_009485  BBta_0575  methyl-accepting chemotaxis sensory transducer  55.27 
 
 
681 aa  334  3e-90  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_0330  putative methyl-accepting chemotaxis receptor/sensory transducer  53.48 
 
 
676 aa  333  4e-90  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0869057 
 
 
-
 
NC_007925  RPC_4527  methyl-accepting chemotaxis sensory transducer  54.9 
 
 
667 aa  332  9e-90  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.527831 
 
 
-
 
NC_007778  RPB_1030  methyl-accepting chemotaxis sensory transducer  61.71 
 
 
653 aa  329  6e-89  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
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