More than 300 homologs were found in PanDaTox collection
for query gene RPD_2465 on replicon NC_007958
Organism: Rhodopseudomonas palustris BisB5



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011004  Rpal_2757  methyl-accepting chemotaxis sensory transducer  77.18 
 
 
561 aa  862    Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0630329  n/a   
 
 
-
 
NC_007778  RPB_2983  methyl-accepting chemotaxis sensory transducer  85.56 
 
 
561 aa  944    Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.0323515 
 
 
-
 
NC_007925  RPC_1795  methyl-accepting chemotaxis sensory transducer  72.91 
 
 
561 aa  801    Rhodopseudomonas palustris BisB18  Bacteria  normal  0.432423  normal  0.0230577 
 
 
-
 
NC_007958  RPD_2465  chemotaxis sensory transducer  100 
 
 
561 aa  1101    Rhodopseudomonas palustris BisB5  Bacteria  normal  0.5909  normal  0.697276 
 
 
-
 
NC_009485  BBta_2904  putative methyl-accepting chemotaxis protein  52.65 
 
 
568 aa  485  1e-136  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.481458  normal  0.283558 
 
 
-
 
NC_007925  RPC_4406  methyl-accepting chemotaxis sensory transducer  52.82 
 
 
566 aa  483  1e-135  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.341232 
 
 
-
 
NC_007925  RPC_4407  methyl-accepting chemotaxis sensory transducer  52.01 
 
 
566 aa  477  1e-133  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.365939 
 
 
-
 
NC_009485  BBta_2906  putative methyl-accepting chemotaxis protein  52.91 
 
 
564 aa  474  1e-132  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.430156  normal  0.106702 
 
 
-
 
NC_007778  RPB_2250  methyl-accepting chemotaxis sensory transducer  67.43 
 
 
670 aa  471  1.0000000000000001e-131  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_0969  methyl-accepting chemotaxis sensory transducer  59.83 
 
 
562 aa  462  1e-129  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.956339  normal  0.570918 
 
 
-
 
NC_007778  RPB_2358  methyl-accepting chemotaxis sensory transducer  69.35 
 
 
673 aa  462  1e-129  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.207811 
 
 
-
 
NC_011004  Rpal_3598  methyl-accepting chemotaxis sensory transducer  70.92 
 
 
672 aa  463  1e-129  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2903  methyl-accepting chemotaxis sensory transducer  49.92 
 
 
568 aa  457  1e-127  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.335645  normal  0.0996392 
 
 
-
 
NC_007925  RPC_3380  methyl-accepting chemotaxis sensory transducer  70.57 
 
 
567 aa  452  1.0000000000000001e-126  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.689596 
 
 
-
 
NC_009485  BBta_2907  putative methyl-accepting chemotaxis protein  52.98 
 
 
556 aa  454  1.0000000000000001e-126  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.835875  normal  0.0729634 
 
 
-
 
NC_007958  RPD_3107  chemotaxis sensory transducer  67.74 
 
 
674 aa  452  1.0000000000000001e-126  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0664997 
 
 
-
 
NC_007958  RPD_3547  chemotaxis sensory transducer  50.35 
 
 
566 aa  453  1.0000000000000001e-126  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_2025  methyl-accepting chemotaxis sensory transducer  59.3 
 
 
688 aa  449  1e-125  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0110809  n/a   
 
 
-
 
NC_007958  RPD_0065  chemotaxis sensory transducer  66.24 
 
 
688 aa  451  1e-125  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0714339 
 
 
-
 
NC_011004  Rpal_5172  methyl-accepting chemotaxis sensory transducer  68.92 
 
 
656 aa  445  1.0000000000000001e-124  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_3804  methyl-accepting chemotaxis sensory transducer  70.46 
 
 
655 aa  446  1.0000000000000001e-124  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.772812  normal 
 
 
-
 
NC_007925  RPC_3379  methyl-accepting chemotaxis sensory transducer  64.83 
 
 
587 aa  443  1e-123  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.787169  normal 
 
 
-
 
NC_009485  BBta_6483  methyl-accepting chemotaxis protein  49.74 
 
 
565 aa  440  9.999999999999999e-123  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.877741  normal 
 
 
-
 
NC_007778  RPB_0192  methyl-accepting chemotaxis sensory transducer  66.5 
 
 
688 aa  440  9.999999999999999e-123  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0994  chemotaxis sensory transducer  68.38 
 
 
656 aa  441  9.999999999999999e-123  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.357708  normal 
 
 
-
 
NC_007958  RPD_1918  chemotaxis sensory transducer  71.14 
 
 
688 aa  441  9.999999999999999e-123  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.537222 
 
 
-
 
NC_009485  BBta_1388  methyl-accepting chemotaxis sensory transducer  66.4 
 
 
656 aa  438  1e-121  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0527529  normal  0.207734 
 
 
-
 
NC_011004  Rpal_4118  methyl-accepting chemotaxis sensory transducer  65.23 
 
 
567 aa  436  1e-121  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_0995  chemotaxis sensory transducer  68.56 
 
 
656 aa  436  1e-121  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.880627  normal 
 
 
-
 
NC_009485  BBta_2901  methyl-accepting chemotaxis sensory transducer  70 
 
 
674 aa  434  1e-120  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.14772  normal  0.22504 
 
 
-
 
NC_007778  RPB_4280  methyl-accepting chemotaxis sensory transducer  69.4 
 
 
563 aa  432  1e-120  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_3161  methyl-accepting chemotaxis sensory transducer  67.21 
 
 
731 aa  435  1e-120  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.072786  normal 
 
 
-
 
NC_009485  BBta_6635  methyl-accepting chemotaxis protein  49.48 
 
 
565 aa  430  1e-119  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.459746  normal  0.104137 
 
 
-
 
NC_007925  RPC_1843  methyl-accepting chemotaxis sensory transducer  68.57 
 
 
568 aa  431  1e-119  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.618754 
 
 
-
 
NC_007925  RPC_2149  methyl-accepting chemotaxis sensory transducer  68 
 
 
675 aa  431  1e-119  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.0391093 
 
 
-
 
NC_009485  BBta_4464  methyl-accepting chemotaxis sensory transducer  65.68 
 
 
573 aa  427  1e-118  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.610641  normal  0.757777 
 
 
-
 
NC_007778  RPB_3545  methyl-accepting chemotaxis sensory transducer  64.47 
 
 
689 aa  427  1e-118  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.457552  normal  0.598514 
 
 
-
 
NC_007925  RPC_2742  methyl-accepting chemotaxis sensory transducer  67.72 
 
 
560 aa  428  1e-118  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.429688 
 
 
-
 
NC_007925  RPC_4101  methyl-accepting chemotaxis sensory transducer  68.57 
 
 
698 aa  425  1e-118  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_1830  methyl-accepting chemotaxis sensory transducer  66.76 
 
 
563 aa  426  1e-118  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_0153  chemotaxis sensory transducer  66.04 
 
 
602 aa  425  1e-118  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_5120  methyl-accepting chemotaxis sensory transducer  65.89 
 
 
563 aa  423  1e-117  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_0337  chemotaxis sensory transducer  58.91 
 
 
563 aa  421  1e-116  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.760858  normal  0.789667 
 
 
-
 
NC_007958  RPD_0497  chemotaxis sensory transducer  62.44 
 
 
577 aa  419  1e-116  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_1857  chemotaxis sensory transducer  64.13 
 
 
563 aa  417  9.999999999999999e-116  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_5119  methyl-accepting chemotaxis sensory transducer  64.53 
 
 
563 aa  414  1e-114  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_0489  methyl-accepting chemotaxis sensory transducer  64.09 
 
 
564 aa  412  1e-114  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.301128  normal 
 
 
-
 
NC_007778  RPB_4286  methyl-accepting chemotaxis sensory transducer  49.58 
 
 
563 aa  414  1e-114  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_2744  methyl-accepting chemotaxis sensory transducer  63.81 
 
 
572 aa  413  1e-114  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.696609  normal  0.585687 
 
 
-
 
NC_011004  Rpal_1871  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  63.66 
 
 
716 aa  410  1e-113  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_3378  methyl-accepting chemotaxis sensory transducer  64.8 
 
 
563 aa  409  1e-113  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.104618  normal 
 
 
-
 
NC_009485  BBta_2368  putative methyl-accepting chemotaxis receptor/sensory transducer precursor  48.96 
 
 
561 aa  408  1.0000000000000001e-112  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.280114 
 
 
-
 
NC_009485  BBta_2905  putative methyl-accepting chemotaxis protein  63.3 
 
 
542 aa  407  1.0000000000000001e-112  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.234112  normal  0.211145 
 
 
-
 
NC_009485  BBta_2900  putative methyl-accepting chemotaxis receptor/sensory transducer (chemoreceptor)  70.17 
 
 
675 aa  406  1.0000000000000001e-112  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.142675  normal  0.173139 
 
 
-
 
NC_007778  RPB_1321  methyl-accepting chemotaxis sensory transducer  65.33 
 
 
730 aa  406  1.0000000000000001e-112  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0177086  normal  0.260794 
 
 
-
 
NC_007925  RPC_4580  methyl-accepting chemotaxis sensory transducer  64.84 
 
 
563 aa  407  1.0000000000000001e-112  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.174371  normal 
 
 
-
 
NC_009485  BBta_7508  putative methyl-accepting chemotaxis protein (with a HAMP region)  64.29 
 
 
552 aa  406  1.0000000000000001e-112  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.692825  normal 
 
 
-
 
NC_007778  RPB_2961  methyl-accepting chemotaxis sensory transducer  66.67 
 
 
563 aa  404  1e-111  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0336  chemotaxis sensory transducer  51.47 
 
 
563 aa  403  1e-111  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_4783  methyl-accepting chemotaxis sensory transducer  62.4 
 
 
730 aa  400  9.999999999999999e-111  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_3377  methyl-accepting chemotaxis sensory transducer  61.87 
 
 
563 aa  399  9.999999999999999e-111  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.528008  normal 
 
 
-
 
NC_009485  BBta_6717  methyl-accepting chemotaxis sensory transducer  59.75 
 
 
741 aa  400  9.999999999999999e-111  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.447835  normal  0.587139 
 
 
-
 
NC_007925  RPC_1253  methyl-accepting chemotaxis sensory transducer  67.57 
 
 
567 aa  397  1e-109  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.010155 
 
 
-
 
NC_011004  Rpal_4941  methyl-accepting chemotaxis sensory transducer  67.03 
 
 
563 aa  397  1e-109  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.396774  n/a   
 
 
-
 
NC_009485  BBta_2367  putative methyl-accepting chemotaxis receptor/sensory transducer precursor  49.91 
 
 
562 aa  392  1e-108  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.287749 
 
 
-
 
NC_009485  BBta_2908  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  68.73 
 
 
561 aa  392  1e-108  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.07018 
 
 
-
 
NC_007964  Nham_1080  methyl-accepting chemotaxis sensory transducer  62.09 
 
 
698 aa  390  1e-107  Nitrobacter hamburgensis X14  Bacteria  normal  0.0139762  n/a   
 
 
-
 
NC_009485  BBta_4269  putative methyl-accepting chemotaxis receptor/sensory transducer protein  63.26 
 
 
691 aa  391  1e-107  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.35374 
 
 
-
 
NC_007958  RPD_1867  chemotaxis sensory transducer  62.75 
 
 
714 aa  389  1e-107  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.133032 
 
 
-
 
NC_007778  RPB_3610  methyl-accepting chemotaxis sensory transducer  63.98 
 
 
563 aa  386  1e-106  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.735593  normal  0.400148 
 
 
-
 
NC_009485  BBta_2902  methyl-accepting chemotaxis sensory transducer  62.5 
 
 
563 aa  381  1e-104  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.32606  normal  0.0943242 
 
 
-
 
NC_007925  RPC_4809  methyl-accepting chemotaxis sensory transducer  66.13 
 
 
563 aa  380  1e-104  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007406  Nwi_2996  methyl-accepting chemotaxis protein  59.36 
 
 
698 aa  375  1e-103  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_1536  methyl-accepting chemotaxis protein  68.73 
 
 
716 aa  377  1e-103  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.566253  normal  0.284447 
 
 
-
 
NC_009485  BBta_0885  putative methyl-accepting chemotaxis protein  59.73 
 
 
691 aa  374  1e-102  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.493714  normal 
 
 
-
 
NC_007406  Nwi_0530  methyl-accepting chemotaxis protein  63.35 
 
 
569 aa  369  1e-101  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.667624  normal 
 
 
-
 
NC_009485  BBta_2799  putative receptor/sensory transducer  64.27 
 
 
707 aa  366  1e-100  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0655652  normal 
 
 
-
 
NC_009485  BBta_0330  putative methyl-accepting chemotaxis receptor/sensory transducer  58.51 
 
 
676 aa  366  1e-100  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0869057 
 
 
-
 
NC_010505  Mrad2831_2241  methyl-accepting chemotaxis sensory transducer  44.52 
 
 
566 aa  367  1e-100  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_2653  methyl-accepting chemotaxis sensory transducer  57.92 
 
 
691 aa  367  1e-100  Rhodopseudomonas palustris HaA2  Bacteria  decreased coverage  0.00184965  normal  0.0777916 
 
 
-
 
NC_011004  Rpal_4271  methyl-accepting chemotaxis sensory transducer  43.15 
 
 
567 aa  365  1e-100  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007964  Nham_1045  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  62.54 
 
 
564 aa  367  1e-100  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_2142  methyl-accepting chemotaxis sensory transducer  63.38 
 
 
428 aa  360  3e-98  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.293169  n/a   
 
 
-
 
NC_007925  RPC_1709  methyl-accepting chemotaxis sensory transducer  52.67 
 
 
568 aa  352  1e-95  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.55655  normal  0.12205 
 
 
-
 
NC_007925  RPC_2457  methyl-accepting chemotaxis sensory transducer  45.03 
 
 
665 aa  352  1e-95  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.0375918  normal  0.509707 
 
 
-
 
NC_011004  Rpal_0233  methyl-accepting chemotaxis sensory transducer  60.7 
 
 
563 aa  351  2e-95  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_0061  methyl-accepting chemotaxis sensory transducer  57.95 
 
 
674 aa  345  1e-93  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_3581  methyl-accepting chemotaxis sensory transducer  43.29 
 
 
567 aa  343  7e-93  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0981346  normal  0.985512 
 
 
-
 
NC_009485  BBta_0575  methyl-accepting chemotaxis sensory transducer  53.56 
 
 
681 aa  334  2e-90  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_1716  methyl-accepting chemotaxis sensory transducer  55.38 
 
 
564 aa  320  3e-86  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0822312  normal  0.62395 
 
 
-
 
NC_007925  RPC_4527  methyl-accepting chemotaxis sensory transducer  54.42 
 
 
667 aa  320  6e-86  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.527831 
 
 
-
 
NC_010511  M446_1024  methyl-accepting chemotaxis sensory transducer  42.61 
 
 
562 aa  314  3.9999999999999997e-84  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_5373  methyl-accepting chemotaxis sensory transducer  54.64 
 
 
565 aa  313  4.999999999999999e-84  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.620524  normal  0.472724 
 
 
-
 
NC_007958  RPD_1025  methyl-accepting chemotaxis sensory transducer  49.23 
 
 
681 aa  312  9e-84  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_0914  methyl-accepting chemotaxis sensory transducer  49.37 
 
 
689 aa  312  1e-83  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.497103 
 
 
-
 
NC_010172  Mext_0667  chemotaxis sensory transducer  42.44 
 
 
565 aa  310  2.9999999999999997e-83  Methylobacterium extorquens PA1  Bacteria  normal  0.510632  normal  0.195802 
 
 
-
 
NC_007778  RPB_1030  methyl-accepting chemotaxis sensory transducer  57.44 
 
 
653 aa  310  2.9999999999999997e-83  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_0679  methyl-accepting chemotaxis sensory transducer  42.31 
 
 
565 aa  309  1.0000000000000001e-82  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.0248904 
 
 
-
 
NC_011757  Mchl_3907  methyl-accepting chemotaxis sensory transducer  40.62 
 
 
565 aa  308  1.0000000000000001e-82  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_3294  methyl-accepting chemotaxis sensory transducer  42.86 
 
 
563 aa  308  2.0000000000000002e-82  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
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