| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3107 |
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| Symbol | |
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| ID | 4023612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 3453404 |
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| End bp | 3455428 |
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| Gene Length | 2025 bp |
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| Protein Length | 674 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637963308 |
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| Product | chemotaxis sensory transducer |
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| Protein accession | YP_570234 |
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| Protein GI | 91977575 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0664997 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCTGA ATCGGATTGG TAACAAACTT GGCCTCGTAG GACTCCTGGG AGTTGTCCTG
AGCGGAGGAA TGCTGATCAA CCAGATGATC GCCGAGCGCG ATATCCAGGC GGCCAACACC
TTCGCTGACA ATCAGCAGTT CATCAGCGAC CGCACGCTGG AGGCGAACAT CGCGCTGCGG
CGGATGCAGA TCGCCTTGCG CGACGTCAGG CTGGCGCGCA CCGCTTCGGA GGTCGAGAAG
GCTGCAAGCG CCCTGTCGGA CATGCACACA CTCACGCTCA AGCAGCTCGG GCTGGCGACG
CCGCGCACCG TAAAGCCGGA AAACAGGGAA CGGCTGGTGA AAATTGCTGC GCTCACGGAT
GCCTACGACA AGAAGGCATC CGAACAGATC AAGACGGTTC TGGAAATCTT CGACACTGCC
GGCAAGCGGG ACAATGTGTC CTCCGAATGG AGCAAGGCCT TCGAGGCTCT GAAGACTTCG
TCTGCGCTAT CAACGGCGAG CAACCGGATC GAAATCGAAC GGGCGATGTA CGAAGTCGAC
ACGCACTTCA ATGCGATTCG CGCGGCGCGC TGGCGATACT ACTCTACGGG CGAGGAAGGC
CAGTTGAAGA CGATCGAGCG CCGGTCGGTC GATCTGAACG CCGCCTTGGC GCTGCTGCAC
AACGCCTCGA CAGATCGAAA TGTCCTGGCG ACGACCGAAA AGTTTCTGAC CATAGCCAAT
TCATTCCACG CTCTGTCCGC AGCATCTGTC AAGGCGGAGG CATTGAAGAC GGAGCAATCA
GCCCAGGCTC TGACGATCGC CACGCAATCC GCGCAATTGA TGCGAGAAGC GGTGGACGTT
GCGGGCAAGG CCGCTCACGA GGCGAACGCC AGCGCCGCCT TGGAGCTGTC TCAAGCCAAT
CGCATCAGCT TCATCGCCGC AGCCGCTGTG ATGCTCGCTC TGATCGGCAG CGTGATCTTC
TCTTTCGTCG GCGTCAGCCG TCCGCTGACC CGCCTGAACG GCGCGCTCGG CAGAATTGCG
GCCGGTCAGC TCAATACCGA GATTCCCGGC GCCAATCGTG GCGACGAGGT CGGCGACATC
GCCAAGACCG TGGTGGTGAT CAGCCGGAAT GCGGAGCAGA AGGCCCGCGA AGAAGCCGAG
ACACAGTCCA GGATGGAACA CGCCGCCGCC CAGCGCCGCA AAGCCGACAT GATGCAGCTT
GCCGACAGCT TCGAAGCCGC CGTCGGCGAT ATCGTCGAAA CGGTTTCGTC GGCTTCGACC
GAACTCGAAG CCTCCGCCAC GAAGCTGACG TCAACGGCTG AACGGTCGCA GGAACTCACC
ACCATGGTCG CGGCCGCTTC CGAGGAAGCG ACCACGAATG TGCAATCGGT GGCCTCGGCG
ACCGAAGAAC TGTCATCGTC GGTCAACGAG ATCAGCCGTC AGGTGCAGAG TTCCGCCCGA
ATGGCCAATG ACGCCGTCGA TCAGGCGCGC GCGACCAACG ACCGCGTCAG CGAACTGTCG
AAGGCGGCGG CCCGTATCGG CGATGTCGTC GAACTGATCA ACACCATCGC GGGCCAGACC
AATCTGCTGG CGCTCAACGC CACCATCGAG GCGGCGCGCG CCGGCGAGGC GGGGCGCGGC
TTCGCTGTGG TGGCGTCGGA AGTGAAAGCT CTGGCCGAAC AGACCGCCAA GGCGACCGGC
GACATCAGTC AGCAGATCTC CAGCATCCAG ACCGCGACCC AGGAATCGGT CGGCTCGATC
AGGGACATCA GCGGCACCAT CGAGAAACTG TCCGAGATCG CCTCGACCAT CGCTTCGGCG
GTCGAAGAAC AGGGCGCGGC GACCCAGGAG ATTTCCCGCA ACGTGCAGCA GGCCGCGATA
GGAACGCAGC AGGTCTCCTC CAATATCAAC GACGTCCAGC GCGGCGCCAA CGAGACCGGC
TCGGCCTCGA CGCAGGTTCT GTCGGCGGCA AAGTCGCTGT CGAGCGACAG CCGACGACTG
AAGCTCGAAG TCGGCAAGTT CCTCAGCACC GTCCGCGCCG CGTAA
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| Protein sequence | MSLNRIGNKL GLVGLLGVVL SGGMLINQMI AERDIQAANT FADNQQFISD RTLEANIALR
RMQIALRDVR LARTASEVEK AASALSDMHT LTLKQLGLAT PRTVKPENRE RLVKIAALTD
AYDKKASEQI KTVLEIFDTA GKRDNVSSEW SKAFEALKTS SALSTASNRI EIERAMYEVD
THFNAIRAAR WRYYSTGEEG QLKTIERRSV DLNAALALLH NASTDRNVLA TTEKFLTIAN
SFHALSAASV KAEALKTEQS AQALTIATQS AQLMREAVDV AGKAAHEANA SAALELSQAN
RISFIAAAAV MLALIGSVIF SFVGVSRPLT RLNGALGRIA AGQLNTEIPG ANRGDEVGDI
AKTVVVISRN AEQKAREEAE TQSRMEHAAA QRRKADMMQL ADSFEAAVGD IVETVSSAST
ELEASATKLT STAERSQELT TMVAAASEEA TTNVQSVASA TEELSSSVNE ISRQVQSSAR
MANDAVDQAR ATNDRVSELS KAAARIGDVV ELINTIAGQT NLLALNATIE AARAGEAGRG
FAVVASEVKA LAEQTAKATG DISQQISSIQ TATQESVGSI RDISGTIEKL SEIASTIASA
VEEQGAATQE ISRNVQQAAI GTQQVSSNIN DVQRGANETG SASTQVLSAA KSLSSDSRRL
KLEVGKFLST VRAA
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