Gene RPC_3377 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3377 
Symbol 
ID3970537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3753561 
End bp3755252 
Gene Length1692 bp 
Protein Length563 aa 
Translation table11 
GC content65% 
IMG OID637926489 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_533237 
Protein GI90424867 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.528008 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGCGA GGCTGTCGAT TCGCGCCAAG ATCACCACCG TCGTCGCCTT CTTGCTGCTC 
GCCATGACCG GCATCGGCCT ATTGGCGGTC AGCAACATGC GGGCGATCAA CGCCACCGCG
GTCGAAATTC AGACCAAGTG GATGCCGAGC GTCCGCATTC TCGGCGATCT TCGCGGCGCG
TTGTTCACCT ACCGCAATAT GGTGCGCGAA CACATGCTCT CGGAAACCGC GCAGACCAAG
GCGGCGACCG AACAGCGGCT GGCCAAGCTG ATGGAGCAGA TCGCCGAGAT CCGCCGGAAT
TACGAGAAGT TGCTGACCAC GCCCGCGGAG CGCGCGATCT ATCAGGAATG GGCGGCGATG
TGGGCGAATT TCGAGAAGGG CAACGAGCAG GTGATGGCGC TGTCGCGCAA TGCCGCAGGA
CAGGTGCCGC ACGACGCCCA TGAGCTGAGC TACAACGTCG TCAATCCGGT CGGGCTTGCC
TCCGACGCCG TTCTGAAGAA GAGCATCGAC TACAACAACA ACGGCTCGGC TGCGGCGAGC
CAAGCGGCCG CCGCAACCTA TGACACCGTG TTCAGGCTGC TGGCGATCAT CCTCGGCTTG
GCGATGATCA CCGGCGTCGG CATCTCGGTC TATCTGGTGC GCGATGTCGG CCGCGGCATC
GGCTCGATCA TCCGCCCGAT GCAGGCGCTC GGCGACGGAG ACCTCAGCGC CGTAGTGCCG
CATCAAGGCG AGAACAACGA GATCGGCGCG ATGGCCGACA GGCTGCAGAT GTTCAAGGAG
GCGCTGATCG CCAAGAAGGC CGCCGACGAG GCGTCCGCGC TGGAAGCCGA TGTCAAGATC
CAACGCGGCC ATCGGGTCGA TGCCATCACC CGCGAGTTCG AATCCATCAT CAGCGAGATC
ATCGACACCG TGTCGTCGGC CTCGACCGAG TTGGAAGCCT CCGCCGGAAC GCTGACGGCG
ACCGCCGCAC GCGCCCAGCA GCTGACCACC AACGTCGCCA CGGCTTCCGA AGAGGCCGCC
AGCAATGTGC AATCGGTGTC CTCGGCGACC GAACAGATGA GTTCGTCGGT CAATGAGATC
AGCCGGCAGG TTCACGAATC CGCGCGGATC GCCGGAGACG CGGTGGAGCA GGCCAGGAAG
ACCAATGACA GCGTCGGCCA GTTGTCGCAG GCGGCAAGCC GGATCGGCGA CGTGGTCGAA
CTGATCAACA CCATCGCGGG ACAGACCAAC CTGCTGGCGC TGAACGCCAC CATCGAGGCG
GCCCGCGCCG GCGACGCCGG CCGCGGCTTT GCCGTTGTTG CCTCCGAGGT CAAGGCGCTG
GCCGAACAGA CCAGCAAGGC GACCGGCGAG ATCAGCCTGC AGATCAACGG CATCCAGACC
GCGACGCAGC AGTCGGTCGG CGCGATCAAG GAGATCGGCC TGACCATCGG GCGGATGTCG
GAAATCGCCG CGACCATCGC CACGGCGGTC GAGCAGCAGG GCGCGGCGAC GCAGGAAATC
TCCCGCAACG TGCATCGCGC GGCCGAAGGC ACCCAACAGG TGAGTTCGAA TATCAGCGCC
GTGCAGCACG GCGCCGGCGA GACCGGATCG GCATCTTCGC AGGTGCTGTC CGCGGCGCGC
TCGCTGTCGC GCGACAGCAA CCGGTTGAAG CTCGAGGTCG ACAAGTTCCT CAGCACGGTG
CGCGCCGCCT AG
 
Protein sequence
MLARLSIRAK ITTVVAFLLL AMTGIGLLAV SNMRAINATA VEIQTKWMPS VRILGDLRGA 
LFTYRNMVRE HMLSETAQTK AATEQRLAKL MEQIAEIRRN YEKLLTTPAE RAIYQEWAAM
WANFEKGNEQ VMALSRNAAG QVPHDAHELS YNVVNPVGLA SDAVLKKSID YNNNGSAAAS
QAAAATYDTV FRLLAIILGL AMITGVGISV YLVRDVGRGI GSIIRPMQAL GDGDLSAVVP
HQGENNEIGA MADRLQMFKE ALIAKKAADE ASALEADVKI QRGHRVDAIT REFESIISEI
IDTVSSASTE LEASAGTLTA TAARAQQLTT NVATASEEAA SNVQSVSSAT EQMSSSVNEI
SRQVHESARI AGDAVEQARK TNDSVGQLSQ AASRIGDVVE LINTIAGQTN LLALNATIEA
ARAGDAGRGF AVVASEVKAL AEQTSKATGE ISLQINGIQT ATQQSVGAIK EIGLTIGRMS
EIAATIATAV EQQGAATQEI SRNVHRAAEG TQQVSSNISA VQHGAGETGS ASSQVLSAAR
SLSRDSNRLK LEVDKFLSTV RAA