Gene BBta_0969 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0969 
Symbol 
ID5150008 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1004371 
End bp1006059 
Gene Length1689 bp 
Protein Length562 aa 
Translation table11 
GC content67% 
IMG OID640555963 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_001237131 
Protein GI148252546 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.956339 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.570918 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTCCT TTTCCAACCT CTCCATTCGC AACAAGGTCC TGTTGGCGTT CGGCATTGTG 
CTGCTCACGG CCATGGGCCT CGGCGGCTTC TCGATCGATC GTCTGTCGAC CGTCAACGGT
TCGGCCGCCG AGGTCCGCGA CAATTGGCTG CCGGCGACCG GCTGGCTCGG AACGATCTCC
AAGGCGGTGG AGCAATATCG CGCGCGCGAG GGCGCGCTGC TGCTTGCATC GCCGGCGGTC
AAGGATCGGC AGGAGCGGTT GCTCAATGAA AGCCTGCAGT TGTTCGAGCA GACCTGGCGC
CTGTATGAGC CGACGGTGAC GAGCGCAGAA GAGAAGGCCC TCGTGGCGGG GTTCAAGGGA
CCGTGGAACT CCTATCTCGA GAGCAGCAGG CAATTGGTCG ACATGGCGCG CAAGAACCAG
ACCGAGGCCG CAACGACGCT CTATATGGGC AAGCTGCGAG ACGACTTCAC GCACCTGCGC
AGCGCCCTCG AAAAGGACCT GGCGTGGAAC GTCGCCCAGG GCAAGGCTGA AGCGGACCGG
GGCGCGGCCG TTTACGTCTC CTCGCGCATG TGGATCCTGG CGACGATCGC GCTGGCCGCC
ATGCTCTGCA TCGCCATGGG CACCATGATC GTGTCCGGCG TGGCGCGCCC GATCACGGCG
ATGACGGAGG CGATGCGCAA GCTTGCTGGC GGCGACATGT CGGCTCCCAT TCCCGGCGTC
GAGCGCAAGG ACGAGATCGG TAAGATGGCG AGCACCGTGC TCGTCTTCAA GGACAACGCC
GTCGAGACCG AGCGGCTGCG CGCCGAGCAG GCCGAGGCCG AGAGGCTGGC GGCCGAGCGG
CGCAAGCGCG ACATGCACGA TCTCGCCAAC AGCTTCGAAG GCGCGATCGG ACAGATCATC
GAGACCGTCT CCTCTGCCTC GACCGAACTG GAAGCGTCGG CCTCGACGCT GACATCGACC
GCCGAGCGCA CGCAGCAGCG CACCACGACT GTGGCCGCGG CCTCGGAGCA GGCGACCGCC
AACGTGCAGT CGGTGGCATC GGCGACGGAG GAGCTGAGCT CGTCGGTGAC CGAGATCAGC
CGGCAGGTGC AGGAGTCCGC ACGCATGGCC AACGAGGCCG TCGATCAGGC CCGCAAGACC
AATGATCGGG TCAGCGAGCT GTCGAAGGCG GCCGCGCGCA TCGGCGACGT CGTCGAACTG
ATCAACACCA TCGCCGGTCA GACCAATCTG CTGGCGCTGA ACGCCACCAT CGAGGCTGCG
CGGGCCGGCG AGGCCGGGCG CGGCTTCGCG GTGGTCGCCT CCGAGGTCAA GGCCCTGGCG
GAGCAGACCG CGCGGGCAAC TGGCGAGATC GGCCAGCAGA TCGCGGGCAT CCAGAGTGCG
ACGCAGGAGT CCGTCGGCGC GATCAAGGAG ATCAGCGGCA CGATCGAGCG GCTGTCCGAG
ATCTCGTCCA CCATCGCTGC GGCGGTCGAA GAACAGGGTG CCGCGACGCA GGAAATCTCG
CGCAACATCC AGCAGGCCGC GCAGGGCACG CATGAGGTGT CGTCCAACAT CACCGACGTG
CAGCGCGGCG CCAGCGAGAC CGGCTCGGCC TCCTCGCAGG TGCTGTCGGC CGCGCAGTCG
CTGTCGCAGG ACAGCAACCG GCTGAAGCTG GAAGTGGGAC GATTCTTGAA CACGGTGCGG
GCGGCGTAG
 
Protein sequence
MPSFSNLSIR NKVLLAFGIV LLTAMGLGGF SIDRLSTVNG SAAEVRDNWL PATGWLGTIS 
KAVEQYRARE GALLLASPAV KDRQERLLNE SLQLFEQTWR LYEPTVTSAE EKALVAGFKG
PWNSYLESSR QLVDMARKNQ TEAATTLYMG KLRDDFTHLR SALEKDLAWN VAQGKAEADR
GAAVYVSSRM WILATIALAA MLCIAMGTMI VSGVARPITA MTEAMRKLAG GDMSAPIPGV
ERKDEIGKMA STVLVFKDNA VETERLRAEQ AEAERLAAER RKRDMHDLAN SFEGAIGQII
ETVSSASTEL EASASTLTST AERTQQRTTT VAAASEQATA NVQSVASATE ELSSSVTEIS
RQVQESARMA NEAVDQARKT NDRVSELSKA AARIGDVVEL INTIAGQTNL LALNATIEAA
RAGEAGRGFA VVASEVKALA EQTARATGEI GQQIAGIQSA TQESVGAIKE ISGTIERLSE
ISSTIAAAVE EQGAATQEIS RNIQQAAQGT HEVSSNITDV QRGASETGSA SSQVLSAAQS
LSQDSNRLKL EVGRFLNTVR AA