Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0065 |
Symbol | |
ID | 4020519 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 76970 |
End bp | 79036 |
Gene Length | 2067 bp |
Protein Length | 688 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637960241 |
Product | chemotaxis sensory transducer |
Protein accession | YP_567206 |
Protein GI | 91974547 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0714339 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCATCA AAACCACGCG CAGCTCCGAA CCGCGAACGT CCGGATTATT GGACTTGTTC ACCAACAGGA AAATCGGCAC CAAGGTCGCG GTCGGATTTG TTCTGATCCA GGTCCTGATG GTGGTTCTCG CCGTCCTGAA TTATTTCTCA TTCGAAAATG TCAGGCAGGC CTTTGTGGCG CTCGACCAGC GCGTGCAGGT CGTGGGCATC GTCCGCGACG TCGATCGCGG CTTCACCGCC TTTCGTCGGT TCGTGCGCGA ATACAGCCTC ACCGGTGACG AGGCGCTGAT CCACGAGGCC GAGAGCCGGC AGAACGCCCT ACGGGAGAGC ATCGCGCAGG GCCTGAAGGA GATCCACGAT CCGTCTCGCT TGGCCAAGAT GAGGGAGATC AGTCAGACAT TCGAAGCGTA CACCACGTCG TTCGCCGACG TGATCCGGAT GCGTCGCGAG CAGAGCACGC TGATCCGAGA GGTGCTGGAT CCCACCGGTC AGAAGGCACG GCTCAAGCTC GAGCAACTTC AAGCAGCGAC TACGGCCGAG GTGGGCGGAG AGACCACTTC GCTCCTCGTC GCGGAGGCGG TGAAGCAACT GCTACTGTTG AGAATCGATG TCAACAAGGT GCTGGGTCGT CACGACCAGG CCGCCGCGGA CGCCGCGGAG AAGGCCTTGG TCGACCTCAG GGGAGCGATG TCGGCGCTGA AGATTGCGAT CGGTTCATCG GCCGGCCGCA AGCAAATCGG CGAGATCGAG GTCGACATCA AGAACTACGC GGATGCTTAT CAAAAGGCCT CGCGCGTCGC TCACGAGGTC GAAGTGCTGG TCAATGGCGC GATGCCAAAA GTCGCGACGG TGATCGCGGA CGGTGCGGCG AGCATCAAGC AGTCCGGGAT TGCCGACCAG CAGATGATCG CCAAGAACAC CGAAGCATTG CTCGACGACA CCAAGAGCCA AATCCTGATC ATCACAGTCG GTGCGGTGGC AATAGGCCTA GTGCTCGCCT GGCTGATCGG CCGCGCAATC TCCCGTCCGA TCATTCGGAT GTCGGGTGCA ATGAAGGAAT TAGCCGGCGG GAATCTTCGC GTCGATGTCC CAGGCTCTGG CCGCCTCGAC GAGATCGGCT TAATGGCGTG CACAGTCGAG GTGTTCAAGC GCAACGCTCT TGAAGTGGAA CGTTTGAAGA CCGAGCAAGA AGAAGCGGAG AGCCGGGTCG CTGCCGAACA TAAGGCGGAG ATGCATCGGC TTGCCGACAA TTTTGAAGGC GCAGTCGGTG AGATTATTCA GACCGTGACC TCGGCGTCCA CCGAGCTCGA AGCTTCCGCG GGGTCGCTGA CCACGACCGC GGACCGTTCT CAGCAGCTTG CCACGACTGT GGCAGCGGCA TCCGAACAGG CTTCCGCCAA CGTCCAGTCG GTGGCGTCCG CGACCGAGGA GATGGCGTCG TCGATATCCG AGATCAGCCG TCAGGTGCAG ACTTCGGCGC GGATCGCGGG CGAGGCTGTC GATCAGGCCC GCAAGACCAA CGATCGCATC GGTCAACTTG CCGACGCAGC GAATCGGATC GGCGACGTCG TCGATCTGAT CAACACCATC GCCGGCCAGA CCAATCTGCT GGCGCTCAAC GCCACCATCG AGGCAGCCCG CGCCGGCGAC GCCGGCCGCG GCTTCGCGGT CGTGGCTCAG GAGGTCAAGG CGCTCGCCGA GCAGACGGCC AAGGCCACCG GGGAGATCAG CCAGCAAGTT TCCGGAATGC AGGCCGCGAC CCAGGATTCG GTCGGGGCCA TCCGGGAGAT CGGCGGTACC ATCGAGCGGA TGTCGGAGAT CGCCTCGACG ATCGCCTCCG CGGTGGAGGA ACAGGGCGCG GCCACGCAGG AGATCTCCCG CAACGTGCAG CAGGCCGCGC AAGGCACCCA GCAGGTCTCG TCGAACATCT GCGATGTTCA GCGGGGCGCC ACTGAGACCG GTTCGGCGTC GACCCAAGTG CTGGCGGCTG TGCAATCGCT GTCGCGGGAC AGCAACCGGC TCAAGGACGA GGTCACCCGT TTCGTGGAGA CGGTGCGAGC GGCGTGA
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Protein sequence | MTIKTTRSSE PRTSGLLDLF TNRKIGTKVA VGFVLIQVLM VVLAVLNYFS FENVRQAFVA LDQRVQVVGI VRDVDRGFTA FRRFVREYSL TGDEALIHEA ESRQNALRES IAQGLKEIHD PSRLAKMREI SQTFEAYTTS FADVIRMRRE QSTLIREVLD PTGQKARLKL EQLQAATTAE VGGETTSLLV AEAVKQLLLL RIDVNKVLGR HDQAAADAAE KALVDLRGAM SALKIAIGSS AGRKQIGEIE VDIKNYADAY QKASRVAHEV EVLVNGAMPK VATVIADGAA SIKQSGIADQ QMIAKNTEAL LDDTKSQILI ITVGAVAIGL VLAWLIGRAI SRPIIRMSGA MKELAGGNLR VDVPGSGRLD EIGLMACTVE VFKRNALEVE RLKTEQEEAE SRVAAEHKAE MHRLADNFEG AVGEIIQTVT SASTELEASA GSLTTTADRS QQLATTVAAA SEQASANVQS VASATEEMAS SISEISRQVQ TSARIAGEAV DQARKTNDRI GQLADAANRI GDVVDLINTI AGQTNLLALN ATIEAARAGD AGRGFAVVAQ EVKALAEQTA KATGEISQQV SGMQAATQDS VGAIREIGGT IERMSEIAST IASAVEEQGA ATQEISRNVQ QAAQGTQQVS SNICDVQRGA TETGSASTQV LAAVQSLSRD SNRLKDEVTR FVETVRAA
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