| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0065 |
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| Symbol | |
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| ID | 4020519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 76970 |
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| End bp | 79036 |
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| Gene Length | 2067 bp |
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| Protein Length | 688 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637960241 |
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| Product | chemotaxis sensory transducer |
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| Protein accession | YP_567206 |
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| Protein GI | 91974547 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0714339 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATCA AAACCACGCG CAGCTCCGAA CCGCGAACGT CCGGATTATT GGACTTGTTC
ACCAACAGGA AAATCGGCAC CAAGGTCGCG GTCGGATTTG TTCTGATCCA GGTCCTGATG
GTGGTTCTCG CCGTCCTGAA TTATTTCTCA TTCGAAAATG TCAGGCAGGC CTTTGTGGCG
CTCGACCAGC GCGTGCAGGT CGTGGGCATC GTCCGCGACG TCGATCGCGG CTTCACCGCC
TTTCGTCGGT TCGTGCGCGA ATACAGCCTC ACCGGTGACG AGGCGCTGAT CCACGAGGCC
GAGAGCCGGC AGAACGCCCT ACGGGAGAGC ATCGCGCAGG GCCTGAAGGA GATCCACGAT
CCGTCTCGCT TGGCCAAGAT GAGGGAGATC AGTCAGACAT TCGAAGCGTA CACCACGTCG
TTCGCCGACG TGATCCGGAT GCGTCGCGAG CAGAGCACGC TGATCCGAGA GGTGCTGGAT
CCCACCGGTC AGAAGGCACG GCTCAAGCTC GAGCAACTTC AAGCAGCGAC TACGGCCGAG
GTGGGCGGAG AGACCACTTC GCTCCTCGTC GCGGAGGCGG TGAAGCAACT GCTACTGTTG
AGAATCGATG TCAACAAGGT GCTGGGTCGT CACGACCAGG CCGCCGCGGA CGCCGCGGAG
AAGGCCTTGG TCGACCTCAG GGGAGCGATG TCGGCGCTGA AGATTGCGAT CGGTTCATCG
GCCGGCCGCA AGCAAATCGG CGAGATCGAG GTCGACATCA AGAACTACGC GGATGCTTAT
CAAAAGGCCT CGCGCGTCGC TCACGAGGTC GAAGTGCTGG TCAATGGCGC GATGCCAAAA
GTCGCGACGG TGATCGCGGA CGGTGCGGCG AGCATCAAGC AGTCCGGGAT TGCCGACCAG
CAGATGATCG CCAAGAACAC CGAAGCATTG CTCGACGACA CCAAGAGCCA AATCCTGATC
ATCACAGTCG GTGCGGTGGC AATAGGCCTA GTGCTCGCCT GGCTGATCGG CCGCGCAATC
TCCCGTCCGA TCATTCGGAT GTCGGGTGCA ATGAAGGAAT TAGCCGGCGG GAATCTTCGC
GTCGATGTCC CAGGCTCTGG CCGCCTCGAC GAGATCGGCT TAATGGCGTG CACAGTCGAG
GTGTTCAAGC GCAACGCTCT TGAAGTGGAA CGTTTGAAGA CCGAGCAAGA AGAAGCGGAG
AGCCGGGTCG CTGCCGAACA TAAGGCGGAG ATGCATCGGC TTGCCGACAA TTTTGAAGGC
GCAGTCGGTG AGATTATTCA GACCGTGACC TCGGCGTCCA CCGAGCTCGA AGCTTCCGCG
GGGTCGCTGA CCACGACCGC GGACCGTTCT CAGCAGCTTG CCACGACTGT GGCAGCGGCA
TCCGAACAGG CTTCCGCCAA CGTCCAGTCG GTGGCGTCCG CGACCGAGGA GATGGCGTCG
TCGATATCCG AGATCAGCCG TCAGGTGCAG ACTTCGGCGC GGATCGCGGG CGAGGCTGTC
GATCAGGCCC GCAAGACCAA CGATCGCATC GGTCAACTTG CCGACGCAGC GAATCGGATC
GGCGACGTCG TCGATCTGAT CAACACCATC GCCGGCCAGA CCAATCTGCT GGCGCTCAAC
GCCACCATCG AGGCAGCCCG CGCCGGCGAC GCCGGCCGCG GCTTCGCGGT CGTGGCTCAG
GAGGTCAAGG CGCTCGCCGA GCAGACGGCC AAGGCCACCG GGGAGATCAG CCAGCAAGTT
TCCGGAATGC AGGCCGCGAC CCAGGATTCG GTCGGGGCCA TCCGGGAGAT CGGCGGTACC
ATCGAGCGGA TGTCGGAGAT CGCCTCGACG ATCGCCTCCG CGGTGGAGGA ACAGGGCGCG
GCCACGCAGG AGATCTCCCG CAACGTGCAG CAGGCCGCGC AAGGCACCCA GCAGGTCTCG
TCGAACATCT GCGATGTTCA GCGGGGCGCC ACTGAGACCG GTTCGGCGTC GACCCAAGTG
CTGGCGGCTG TGCAATCGCT GTCGCGGGAC AGCAACCGGC TCAAGGACGA GGTCACCCGT
TTCGTGGAGA CGGTGCGAGC GGCGTGA
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| Protein sequence | MTIKTTRSSE PRTSGLLDLF TNRKIGTKVA VGFVLIQVLM VVLAVLNYFS FENVRQAFVA
LDQRVQVVGI VRDVDRGFTA FRRFVREYSL TGDEALIHEA ESRQNALRES IAQGLKEIHD
PSRLAKMREI SQTFEAYTTS FADVIRMRRE QSTLIREVLD PTGQKARLKL EQLQAATTAE
VGGETTSLLV AEAVKQLLLL RIDVNKVLGR HDQAAADAAE KALVDLRGAM SALKIAIGSS
AGRKQIGEIE VDIKNYADAY QKASRVAHEV EVLVNGAMPK VATVIADGAA SIKQSGIADQ
QMIAKNTEAL LDDTKSQILI ITVGAVAIGL VLAWLIGRAI SRPIIRMSGA MKELAGGNLR
VDVPGSGRLD EIGLMACTVE VFKRNALEVE RLKTEQEEAE SRVAAEHKAE MHRLADNFEG
AVGEIIQTVT SASTELEASA GSLTTTADRS QQLATTVAAA SEQASANVQS VASATEEMAS
SISEISRQVQ TSARIAGEAV DQARKTNDRI GQLADAANRI GDVVDLINTI AGQTNLLALN
ATIEAARAGD AGRGFAVVAQ EVKALAEQTA KATGEISQQV SGMQAATQDS VGAIREIGGT
IERMSEIAST IASAVEEQGA ATQEISRNVQ QAAQGTQQVS SNICDVQRGA TETGSASTQV
LAAVQSLSRD SNRLKDEVTR FVETVRAA
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