More than 300 homologs were found in PanDaTox collection
for query gene RPD_0153 on replicon NC_007958
Organism: Rhodopseudomonas palustris BisB5



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007958  RPD_0153  chemotaxis sensory transducer  100 
 
 
602 aa  1201    Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_2358  methyl-accepting chemotaxis sensory transducer  70.5 
 
 
673 aa  497  1e-139  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.207811 
 
 
-
 
NC_011004  Rpal_3598  methyl-accepting chemotaxis sensory transducer  70.57 
 
 
672 aa  492  9.999999999999999e-139  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_0969  methyl-accepting chemotaxis sensory transducer  67.07 
 
 
562 aa  495  9.999999999999999e-139  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.956339  normal  0.570918 
 
 
-
 
NC_007925  RPC_3380  methyl-accepting chemotaxis sensory transducer  71.73 
 
 
567 aa  489  1e-137  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.689596 
 
 
-
 
NC_009485  BBta_2904  putative methyl-accepting chemotaxis protein  71.01 
 
 
568 aa  487  1e-136  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.481458  normal  0.283558 
 
 
-
 
NC_007925  RPC_3804  methyl-accepting chemotaxis sensory transducer  72.33 
 
 
655 aa  488  1e-136  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.772812  normal 
 
 
-
 
NC_009485  BBta_7508  putative methyl-accepting chemotaxis protein (with a HAMP region)  73.14 
 
 
552 aa  480  1e-134  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.692825  normal 
 
 
-
 
NC_007925  RPC_4406  methyl-accepting chemotaxis sensory transducer  69.68 
 
 
566 aa  480  1e-134  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.341232 
 
 
-
 
NC_007925  RPC_4407  methyl-accepting chemotaxis sensory transducer  69.71 
 
 
566 aa  481  1e-134  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.365939 
 
 
-
 
NC_007958  RPD_3107  chemotaxis sensory transducer  69.71 
 
 
674 aa  478  1e-133  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0664997 
 
 
-
 
NC_007925  RPC_3379  methyl-accepting chemotaxis sensory transducer  76 
 
 
587 aa  474  1e-132  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.787169  normal 
 
 
-
 
NC_009485  BBta_2903  methyl-accepting chemotaxis sensory transducer  71.23 
 
 
568 aa  462  1e-129  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.335645  normal  0.0996392 
 
 
-
 
NC_009485  BBta_6483  methyl-accepting chemotaxis protein  66.49 
 
 
565 aa  462  1e-129  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.877741  normal 
 
 
-
 
NC_007958  RPD_0065  chemotaxis sensory transducer  66.76 
 
 
688 aa  462  1e-129  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0714339 
 
 
-
 
NC_007958  RPD_1918  chemotaxis sensory transducer  66.93 
 
 
688 aa  462  1e-129  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.537222 
 
 
-
 
NC_009485  BBta_2901  methyl-accepting chemotaxis sensory transducer  73.22 
 
 
674 aa  461  9.999999999999999e-129  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.14772  normal  0.22504 
 
 
-
 
NC_007925  RPC_4101  methyl-accepting chemotaxis sensory transducer  70.22 
 
 
698 aa  461  9.999999999999999e-129  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0995  chemotaxis sensory transducer  69.11 
 
 
656 aa  461  9.999999999999999e-129  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.880627  normal 
 
 
-
 
NC_009485  BBta_6635  methyl-accepting chemotaxis protein  67.72 
 
 
565 aa  457  1e-127  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.459746  normal  0.104137 
 
 
-
 
NC_007778  RPB_0192  methyl-accepting chemotaxis sensory transducer  67.65 
 
 
688 aa  457  1e-127  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_2250  methyl-accepting chemotaxis sensory transducer  67.56 
 
 
670 aa  454  1.0000000000000001e-126  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_2983  methyl-accepting chemotaxis sensory transducer  66.58 
 
 
561 aa  453  1.0000000000000001e-126  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.0323515 
 
 
-
 
NC_007778  RPB_4280  methyl-accepting chemotaxis sensory transducer  67.89 
 
 
563 aa  454  1.0000000000000001e-126  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_2744  methyl-accepting chemotaxis sensory transducer  52.85 
 
 
572 aa  454  1.0000000000000001e-126  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.696609  normal  0.585687 
 
 
-
 
NC_007958  RPD_0994  chemotaxis sensory transducer  66.49 
 
 
656 aa  455  1.0000000000000001e-126  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.357708  normal 
 
 
-
 
NC_009485  BBta_2906  putative methyl-accepting chemotaxis protein  66.75 
 
 
564 aa  449  1e-125  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.430156  normal  0.106702 
 
 
-
 
NC_007778  RPB_3545  methyl-accepting chemotaxis sensory transducer  67.4 
 
 
689 aa  451  1e-125  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.457552  normal  0.598514 
 
 
-
 
NC_007925  RPC_2149  methyl-accepting chemotaxis sensory transducer  67.43 
 
 
675 aa  447  1.0000000000000001e-124  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.0391093 
 
 
-
 
NC_009485  BBta_4464  methyl-accepting chemotaxis sensory transducer  68.02 
 
 
573 aa  448  1.0000000000000001e-124  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.610641  normal  0.757777 
 
 
-
 
NC_011004  Rpal_2757  methyl-accepting chemotaxis sensory transducer  63.8 
 
 
561 aa  443  1e-123  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0630329  n/a   
 
 
-
 
NC_009485  BBta_2907  putative methyl-accepting chemotaxis protein  71.79 
 
 
556 aa  444  1e-123  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.835875  normal  0.0729634 
 
 
-
 
NC_007958  RPD_2465  chemotaxis sensory transducer  66.04 
 
 
561 aa  442  1e-123  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.5909  normal  0.697276 
 
 
-
 
NC_007958  RPD_3547  chemotaxis sensory transducer  67.57 
 
 
566 aa  443  1e-123  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_2025  methyl-accepting chemotaxis sensory transducer  65.05 
 
 
688 aa  441  9.999999999999999e-123  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0110809  n/a   
 
 
-
 
NC_007925  RPC_1795  methyl-accepting chemotaxis sensory transducer  65.96 
 
 
561 aa  441  9.999999999999999e-123  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.432423  normal  0.0230577 
 
 
-
 
NC_009485  BBta_6717  methyl-accepting chemotaxis sensory transducer  67.65 
 
 
741 aa  436  1e-121  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.447835  normal  0.587139 
 
 
-
 
NC_011004  Rpal_4118  methyl-accepting chemotaxis sensory transducer  63.06 
 
 
567 aa  438  1e-121  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2368  putative methyl-accepting chemotaxis receptor/sensory transducer precursor  65.16 
 
 
561 aa  436  1e-121  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.280114 
 
 
-
 
NC_007925  RPC_2742  methyl-accepting chemotaxis sensory transducer  64.22 
 
 
560 aa  437  1e-121  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.429688 
 
 
-
 
NC_009485  BBta_1388  methyl-accepting chemotaxis sensory transducer  62.59 
 
 
656 aa  437  1e-121  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0527529  normal  0.207734 
 
 
-
 
NC_007406  Nwi_2996  methyl-accepting chemotaxis protein  63.71 
 
 
698 aa  435  1e-120  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_2905  putative methyl-accepting chemotaxis protein  66.93 
 
 
542 aa  435  1e-120  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.234112  normal  0.211145 
 
 
-
 
NC_007925  RPC_1843  methyl-accepting chemotaxis sensory transducer  66.86 
 
 
568 aa  432  1e-120  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.618754 
 
 
-
 
NC_011004  Rpal_5172  methyl-accepting chemotaxis sensory transducer  64.75 
 
 
656 aa  434  1e-120  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_0497  chemotaxis sensory transducer  66.31 
 
 
577 aa  432  1e-120  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_1857  chemotaxis sensory transducer  63.78 
 
 
563 aa  434  1e-120  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_1253  methyl-accepting chemotaxis sensory transducer  69.6 
 
 
567 aa  431  1e-119  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.010155 
 
 
-
 
NC_011004  Rpal_5119  methyl-accepting chemotaxis sensory transducer  60 
 
 
563 aa  429  1e-119  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_3161  methyl-accepting chemotaxis sensory transducer  66.31 
 
 
731 aa  426  1e-118  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.072786  normal 
 
 
-
 
NC_009485  BBta_2908  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  66.58 
 
 
561 aa  424  1e-117  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.07018 
 
 
-
 
NC_007964  Nham_1080  methyl-accepting chemotaxis sensory transducer  64.54 
 
 
698 aa  422  1e-117  Nitrobacter hamburgensis X14  Bacteria  normal  0.0139762  n/a   
 
 
-
 
NC_009485  BBta_2902  methyl-accepting chemotaxis sensory transducer  66.84 
 
 
563 aa  421  1e-116  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.32606  normal  0.0943242 
 
 
-
 
NC_011004  Rpal_1830  methyl-accepting chemotaxis sensory transducer  59.62 
 
 
563 aa  416  9.999999999999999e-116  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2900  putative methyl-accepting chemotaxis receptor/sensory transducer (chemoreceptor)  66.41 
 
 
675 aa  418  9.999999999999999e-116  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.142675  normal  0.173139 
 
 
-
 
NC_007925  RPC_3377  methyl-accepting chemotaxis sensory transducer  62.33 
 
 
563 aa  418  9.999999999999999e-116  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.528008  normal 
 
 
-
 
NC_007925  RPC_3378  methyl-accepting chemotaxis sensory transducer  63.35 
 
 
563 aa  416  9.999999999999999e-116  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.104618  normal 
 
 
-
 
NC_007958  RPD_0337  chemotaxis sensory transducer  63.14 
 
 
563 aa  417  9.999999999999999e-116  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.760858  normal  0.789667 
 
 
-
 
NC_007778  RPB_2961  methyl-accepting chemotaxis sensory transducer  66.76 
 
 
563 aa  413  1e-114  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_4286  methyl-accepting chemotaxis sensory transducer  63.16 
 
 
563 aa  414  1e-114  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_1536  methyl-accepting chemotaxis protein  70.14 
 
 
716 aa  411  1e-113  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.566253  normal  0.284447 
 
 
-
 
NC_011004  Rpal_5120  methyl-accepting chemotaxis sensory transducer  64.42 
 
 
563 aa  412  1e-113  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_4783  methyl-accepting chemotaxis sensory transducer  62.7 
 
 
730 aa  409  1e-113  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_0489  methyl-accepting chemotaxis sensory transducer  65.17 
 
 
564 aa  410  1e-113  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.301128  normal 
 
 
-
 
NC_007778  RPB_1321  methyl-accepting chemotaxis sensory transducer  66.57 
 
 
730 aa  410  1e-113  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0177086  normal  0.260794 
 
 
-
 
NC_009485  BBta_0885  putative methyl-accepting chemotaxis protein  55.1 
 
 
691 aa  411  1e-113  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.493714  normal 
 
 
-
 
NC_007958  RPD_0336  chemotaxis sensory transducer  61.24 
 
 
563 aa  410  1e-113  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_1867  chemotaxis sensory transducer  57.18 
 
 
714 aa  409  1e-113  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.133032 
 
 
-
 
NC_009485  BBta_2367  putative methyl-accepting chemotaxis receptor/sensory transducer precursor  64.66 
 
 
562 aa  407  1.0000000000000001e-112  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.287749 
 
 
-
 
NC_007925  RPC_4580  methyl-accepting chemotaxis sensory transducer  59.85 
 
 
563 aa  406  1.0000000000000001e-112  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.174371  normal 
 
 
-
 
NC_007925  RPC_4809  methyl-accepting chemotaxis sensory transducer  66.05 
 
 
563 aa  407  1.0000000000000001e-112  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_1871  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  62.67 
 
 
716 aa  404  1e-111  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_4269  putative methyl-accepting chemotaxis receptor/sensory transducer protein  62.5 
 
 
691 aa  401  9.999999999999999e-111  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.35374 
 
 
-
 
NC_011004  Rpal_4941  methyl-accepting chemotaxis sensory transducer  65.24 
 
 
563 aa  401  9.999999999999999e-111  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.396774  n/a   
 
 
-
 
NC_007778  RPB_2653  methyl-accepting chemotaxis sensory transducer  50.89 
 
 
691 aa  401  9.999999999999999e-111  Rhodopseudomonas palustris HaA2  Bacteria  decreased coverage  0.00184965  normal  0.0777916 
 
 
-
 
NC_011004  Rpal_2142  methyl-accepting chemotaxis sensory transducer  74.13 
 
 
428 aa  392  1e-108  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.293169  n/a   
 
 
-
 
NC_011004  Rpal_4271  methyl-accepting chemotaxis sensory transducer  58.18 
 
 
567 aa  395  1e-108  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_3610  methyl-accepting chemotaxis sensory transducer  60.42 
 
 
563 aa  390  1e-107  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.735593  normal  0.400148 
 
 
-
 
NC_009485  BBta_2799  putative receptor/sensory transducer  64.87 
 
 
707 aa  381  1e-104  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0655652  normal 
 
 
-
 
NC_007925  RPC_2457  methyl-accepting chemotaxis sensory transducer  58.65 
 
 
665 aa  381  1e-104  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.0375918  normal  0.509707 
 
 
-
 
NC_009485  BBta_0330  putative methyl-accepting chemotaxis receptor/sensory transducer  56.77 
 
 
676 aa  369  1e-101  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0869057 
 
 
-
 
NC_007964  Nham_1045  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  56.28 
 
 
564 aa  369  1e-101  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_1709  methyl-accepting chemotaxis sensory transducer  56.18 
 
 
568 aa  371  1e-101  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.55655  normal  0.12205 
 
 
-
 
NC_007958  RPD_3581  methyl-accepting chemotaxis sensory transducer  55.58 
 
 
567 aa  370  1e-101  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0981346  normal  0.985512 
 
 
-
 
NC_011004  Rpal_0233  methyl-accepting chemotaxis sensory transducer  61.38 
 
 
563 aa  366  1e-100  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_0575  methyl-accepting chemotaxis sensory transducer  56.7 
 
 
681 aa  364  3e-99  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_4527  methyl-accepting chemotaxis sensory transducer  59.38 
 
 
667 aa  363  3e-99  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.527831 
 
 
-
 
NC_007406  Nwi_0530  methyl-accepting chemotaxis protein  57.53 
 
 
569 aa  361  2e-98  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.667624  normal 
 
 
-
 
NC_011004  Rpal_5144  methyl-accepting chemotaxis sensory transducer  56.25 
 
 
686 aa  352  8.999999999999999e-96  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_0061  methyl-accepting chemotaxis sensory transducer  55.64 
 
 
674 aa  352  1e-95  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_1025  methyl-accepting chemotaxis sensory transducer  55.68 
 
 
681 aa  351  3e-95  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_0914  methyl-accepting chemotaxis sensory transducer  54.14 
 
 
689 aa  346  6e-94  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.497103 
 
 
-
 
NC_007778  RPB_1716  methyl-accepting chemotaxis sensory transducer  54.92 
 
 
564 aa  344  2.9999999999999997e-93  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0822312  normal  0.62395 
 
 
-
 
NC_007778  RPB_1030  methyl-accepting chemotaxis sensory transducer  55.53 
 
 
653 aa  338  9.999999999999999e-92  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_009456  VC0395_0331  methyl-accepting chemotaxis protein  35.49 
 
 
578 aa  320  3e-86  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_2054  methyl-accepting chemotaxis sensory transducer  53.74 
 
 
665 aa  316  6e-85  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_5044  methyl-accepting chemotaxis receptor/sensory transducer  53.56 
 
 
662 aa  314  2.9999999999999996e-84  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.859604  normal 
 
 
-
 
NC_009485  BBta_4739  methyl-accepting chemotaxis sensory transducer  61.4 
 
 
450 aa  311  2e-83  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007964  Nham_0772  methyl-accepting chemotaxis sensory transducer  52.94 
 
 
561 aa  311  2.9999999999999997e-83  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_2743  methyl-accepting chemotaxis sensory transducer  51.69 
 
 
579 aa  310  4e-83  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.408122 
 
 
-
 
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