Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1253 |
Symbol | |
ID | 3972046 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 1370104 |
End bp | 1371807 |
Gene Length | 1704 bp |
Protein Length | 567 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637924363 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_531134 |
Protein GI | 90422764 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein [COG4564] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.010155 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCCTG CGCTATCGAC TGGGTTCAGA TTCACCATCA GCCGCAAGAT TTACGTTCTG ATCGGTCTCG GCTTTGTCGG GCTGCTGGGG ATCGCATTTC TGGATTCCAG CGAACTCGGG TCCGGCTTGA AGCAGCAGAA GCAGGTCGAG CTGCAACGGC TCACCGAACT CGCCGTCGCT ATCGTCAAGG ACGAATACGC CACGGCTCAA AGCGGCGAGA TATCGGTCGC CGAAGCGCAA AAGCGCGCGC AGGCGCGAGT GGCGACCATG CGCTATGGCA ACAATGATTA CTTCTTCGTC ACCGACATGC AGGGCAGGAT GCTGATGCAC CCGGTCACCG CGGGTTTGGT CGGGACGGAC ATGTCGCATA CCAAGGACCC GAACGGCAGA CGTTTCATCG CCGAAATGGT CGACGCGGTG AAGCAAAAGG GCTCCGGTTT CGTCGACTAC AGCTGGGCCA AACCGGGCTC CAACAAGCCG CAGCCGAAGT TGTCCTACGC CGCCGGTTTT GCGCCGTGGG GCTGGGTGAT CACGACCGGC GTCTATATCG ACGATCTCGA TGCGCAGACC TGGGCTTCCA CGCAGCGCTC GCTGATCGCC GCGACCGTCA TTCTGCTGAT CACGCTCGCG GTCTCGGTCT TCATGGCCGG CCGCATCACC AAACCCTTGC ACCGGATGAC CGATGCGATG AAGGCACTCG CCGGCGGCCG GCTCGACGTC GCGATACCCG GCGTCGGTCG CAACGACGAG ATCGGCGAGA TGGCCGAGGC CGTCGCAGTG TTCAAGACCA ACGCGGTGGA GCGCCAGCGC CTGGAAGCCG AACAGAAAGA ACTGGAGGCG CGCGCCGCCG CGCAGCGCAA GGCCGACACC AGTCGGCTCG CCGACGACTT CGAAACCGCG GTCGGCGAGA TCATCGAAAC CGTAACCTCG GCGTCCAACG AATTGGAGGC CTCCGCCACC ACGCTGACCA CCACCGCGGC GCGTTCGCAG CAACTCGCGA CGATGGTGGC GTCGGCCTCC GAAGAGGCTT CCACCAATGT GCAGTCGGTG GCCTCGGCCA CCGAGGAGAT GAGTTCGTCG GTCGACGAGA TCAGCCGCCA GGTGCAGGAC TCCGCCCGCA TCGCGCACGA CGCGGTGACG CAGGCCCGCA TCACCAACGA CCGGGTCGGC GAATTGTCGA AGGCGGCGGC GCGGATCGGC GACGTCGTGG AGTTGATCAA CACCATCGCC GGCCAGACCA ATCTCTTGGC GCTGAACGCC ACCATCGAAG CCGCCCGCGC CGGCGCGGCG GGGCGCGGCT TCGCCGTGGT CGCGAGCGAG GTCAAGGCGC TGGCGGAGCA GACCGCCAAG GCGACCGGCG AGATCGGCCA GCAGATCACC GGCATTCAGA GCGCCACGCG CGACTCCGTC GCCGCGATCG AGGAGATCAG CGCCACCATC GGCAAGATGT CGGAGATCGC CTCGACCATC GCCTCGGCGG TAGAGGAGCA GGGCGCGGCG ACCCGCGAGA TTTCACGCAA CGTGCAGCAG GCCGCGCAAG GCACCAGCCA GGTCAGTTCG AACATTTCCG ATGTGCAACA CGGCGCCGGC GAAACCGGGT CGGCATCGGC GCAGGTGCTG TCGGCGGCGC AGGTGCTGTC GCGCGACAGC AGCAGGCTGA AGACCGAGGT CAGCAGATTC CTGCACAGCG TCCGCGCGGC GTAA
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Protein sequence | MPPALSTGFR FTISRKIYVL IGLGFVGLLG IAFLDSSELG SGLKQQKQVE LQRLTELAVA IVKDEYATAQ SGEISVAEAQ KRAQARVATM RYGNNDYFFV TDMQGRMLMH PVTAGLVGTD MSHTKDPNGR RFIAEMVDAV KQKGSGFVDY SWAKPGSNKP QPKLSYAAGF APWGWVITTG VYIDDLDAQT WASTQRSLIA ATVILLITLA VSVFMAGRIT KPLHRMTDAM KALAGGRLDV AIPGVGRNDE IGEMAEAVAV FKTNAVERQR LEAEQKELEA RAAAQRKADT SRLADDFETA VGEIIETVTS ASNELEASAT TLTTTAARSQ QLATMVASAS EEASTNVQSV ASATEEMSSS VDEISRQVQD SARIAHDAVT QARITNDRVG ELSKAAARIG DVVELINTIA GQTNLLALNA TIEAARAGAA GRGFAVVASE VKALAEQTAK ATGEIGQQIT GIQSATRDSV AAIEEISATI GKMSEIASTI ASAVEEQGAA TREISRNVQQ AAQGTSQVSS NISDVQHGAG ETGSASAQVL SAAQVLSRDS SRLKTEVSRF LHSVRAA
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