Gene BBta_6483 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_6483 
Symbolmcpa 
ID5155874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6754860 
End bp6756557 
Gene Length1698 bp 
Protein Length565 aa 
Translation table11 
GC content64% 
IMG OID640561182 
Productmethyl-accepting chemotaxis protein 
Protein accessionYP_001242298 
Protein GI148257713 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.877741 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGTTGC TCGACCATCT CAAGATCATT TGGAAGATCA GCCTCATCGT TGCCGTGCTG 
GGAGCAACAC TTGCCGGCGT CGTCGTGTTC GGCACCGACC AATTGAGCAC GACGGTTGCG
GACTTCGCGG AGCTGTCCAA CCAGCAAATG AGTTCCATCG CGGTGGTGCG GGCTCAGCGC
CGCCTCGAAA CCTATCATGC CGCGCTCTAC GCTCTGCTCA CGGAGACGAC CGCCGAAGGC
AACGAGAAGC GGTTGAAGCT CGCCGTCAAA AACCGTGACG AGATCGCATC CTTCATGGAC
CTGGCGTCCA AAGAAGACCC GGCGCAGACC AAGCAGATCG ATGGCTTCAA GGCTGACCTG
ACACGGGCAT TTGCCGTTTG CGATCCCGTG CTGGAGGCCG GGGCCAAGGC GGTGAGCCCG
GAGGAAAATG CCAAGGTGGC CGATCGCGCG CACCAGGAAT GCGATCCGGC CATCGACGGT
GTGCTCGGCA AACTGCAGAC CTTCGTCGGT CAGATCGTGG AACTGACGCG CAAGAAGAAT
GAGGCCATCC GAGCCGAAGC TGACTCAAGC ACCCGCGCGG TGATGCTGGT TGGGATTGTT
GGACTGATCA TCGGCGTCGC CATTGCATTG TTCATCGGCT TGAGATCGCT GTCGGCCCCC
ATCGCCCGGC TGAAGGCCGC GATGGAGCGG CTCGCCAACA ACGATCTCAC TGTCGAGGTG
CCCGAGACCG AACGCCGCGA CGAACTCGGC GACATGGCCA AGACCGTCCA GGTCTTCAAG
ACCAACGGCA TCGAGGTGGC GCGCCTGAAG AAAGTGCAGG AGGAGACCGA GCGGCAGGCT
GCGGAGCAGC GCCGGCGCGA CATGCACGAC CTCGCCAACA AATTCGAGCA GGCTGTCGGC
GACATCGTCC ACACGGTGTC GTCGGCATCG ACGGAGCTCG AGGCATCTGC CAACACGCTC
AACCAGACGG CGGAGCGATC GCAGCGGCTC ACCAACGTGG TGGCCTCTGC CTCGGAAGAG
GCCTCGACCA ACGTGCATTC GGTGGCCTCG GCGGCTGAGG AGCTGTCATC CTCCGTCAAT
GAGATCAGCC GCCAAGTGCA GGAATCGGCA CGGATGGCCA ATGAAGCGGT CAGCCAGGCG
CGCAAGACCA ACGATCGGGT CAGCGAGCTG TCGAAGGCCG CCGCACGCAT CGGCGACGTC
GTCGAGCTGA TCAACACCAT CGCCGGGCAA ACCAATCTCT TGGCGCTCAA TGCCACCATC
GAGGCAGCGC GCGCCGGTGA AGCCGGCCGC GGATTCGCGG TGGTGGCCAC CGAGGTGAAG
GCGCTTGCCG AGCAGACCGC CAAGGCCACC GGGGAGATCG GCCAGCAGAT TTCCGGCATT
CAGACCGCGA CGCAGGAATC GGTCGGGGCG ATCCGGGAGA TCTCGGGCAC GATCGAGCGG
CTGGCGGAGA TCGCCTCGAC GATCGCCGCC GCGGTCGAGC AGCAGGGCGC CGCGACCCAG
GAAATCTCGC GCAACGTGCA GCAGGCCTCG CAGGGCACCA GGGAGGTCTC GACGAACATC
ATCGACGTGC AGCGCGGTGC CTCCGAGACC GGCTCAGCCT CGTCGCAGGT GCTCTCTGCG
GCCAAATCGC TGTCCACGGA CAGCGAACGG CTGCGCGGTG AAATCACGCG ATTCCTCGGC
ACGGTGCGGG CCGCCTGA
 
Protein sequence
MRLLDHLKII WKISLIVAVL GATLAGVVVF GTDQLSTTVA DFAELSNQQM SSIAVVRAQR 
RLETYHAALY ALLTETTAEG NEKRLKLAVK NRDEIASFMD LASKEDPAQT KQIDGFKADL
TRAFAVCDPV LEAGAKAVSP EENAKVADRA HQECDPAIDG VLGKLQTFVG QIVELTRKKN
EAIRAEADSS TRAVMLVGIV GLIIGVAIAL FIGLRSLSAP IARLKAAMER LANNDLTVEV
PETERRDELG DMAKTVQVFK TNGIEVARLK KVQEETERQA AEQRRRDMHD LANKFEQAVG
DIVHTVSSAS TELEASANTL NQTAERSQRL TNVVASASEE ASTNVHSVAS AAEELSSSVN
EISRQVQESA RMANEAVSQA RKTNDRVSEL SKAAARIGDV VELINTIAGQ TNLLALNATI
EAARAGEAGR GFAVVATEVK ALAEQTAKAT GEIGQQISGI QTATQESVGA IREISGTIER
LAEIASTIAA AVEQQGAATQ EISRNVQQAS QGTREVSTNI IDVQRGASET GSASSQVLSA
AKSLSTDSER LRGEITRFLG TVRAA