| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4271 |
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| Symbol | |
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| ID | 6411955 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4594262 |
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| End bp | 4595965 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642714153 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001993242 |
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| Protein GI | 192292637 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAAGCT GGATCAAACA CATCGGACTG TCGTGGAAGG TCCAGCTCGC TCCTGCATTT
CTGGTCGTGG TGATGATCGC GATCGGCGTG TTCGCGCTGC TGTCTCTGCG CGCCAATCAG
CAGAACGTCG ATAAGCTGGT GTCCGGCCCG GTCAGGCTGT CGGAGCTGGC GGCCGACCTC
AACAACACCG CCTGGACCGC CCACGCCAAG CTGTACCGGA TGGCCGCGAC CGCGGCCAAC
GAGACCGACG CGGCCAAGCT GACCACGATC ATCAAGGAAG CGGCCGCGGG GATCGGTCAG
ATTCCGGCCG CGCTCGGCGA GGTCGAGAAG GCGCTCGGTT CCGATGCCGC CAAGCCGCCG
TTTCAGAAGT TGAAGGCGGC GGTGGCCGGC TATCAGAAGC AGGCCAAGAA CGCGATCGAG
ATGGCCGACG GTGATGCCGG CTCGGCGATG CTGTTCATCA AGAGCGCGGA GAAGAGCTTC
GGCGAGATCG ACAGGCTGAT CGGTGACCTG ATCCTGTCGA GCACCGACAG CCGCGACCGC
GAGATCGCGC AGACTGGCAT CGCGCTCGAT CGCGAACAAT GGCTGCTCGG AGCCATTCTG
GCGACGGCGT CGTTGGTCGG CATCGCGTTT TCGTTTTTGA TCGGCCGTGG CATCGCCCGC
CCGGTGGTGG CGATGTCCGG CGCGATGCGG GAATTGGCCT CCGGCAATTT CGAGGTGCAG
TTGCCCGGGC TCGACCGTGG CGACGAGGTC GGCCAGATGG CCCGCGCCGT CGAGGAGTTC
AAGATCCAGG CGGTGGCCAA GGCCGAACGC GAGCAGGCCG AACGCCAGCG CCAGGAGCAG
ATCGCCGCTG AATCGCGCCG CGCCGAGCTG CATCAGCTTG CCGATGGTTT CGAGGCCGCG
GTCGGTCAGA TCGTCGAACA GGTCGGCGTT GCCTCGCAAG CGCTGGAAGC CTCCGCCGGC
GCGCTCGCCA AGGGCAGCGC CGAGACCCAG CAGCTCGCCA CCATGGTGGC GGCGGCCTCA
TCGCAGACAT CTACCAACGT ACAATCGGTG GCGTCTGCAA CCGAGCAGAT GTCCGCGTCG
GTCGAAGAGA TCGGCCGCCA GGTCAGCGAG TCGCGCAAGA TCGCGGACGA AGCTGTGCAG
CAGGCCGAAC AGACCGACGC GCGGATCGCC AAGTTGGCGC AGGCCGCCAA CCGGATCGGC
GACGTGACCC AGTTGATCAC CACCATCGCC GGCCAGACCA ATCTGCTCGC GCTCAACGCC
ACCATCGAGT CCGCCCGTGC CGGCGAGGCG GGGCGCGGTT TCGCCGTGGT GGCGCAGGAG
GTCAAGGCAC TGGCGGAGCA GACCGCGAAA GCCACCGACG AAATCAGCGC GCAGATTGCC
GAGATGCAGG CCGCGACCCG GGAGTCGGTG GACGCCATCA AGGAGATCGG CGGCACCATC
GGCAAGATCG CCCATATCTC GTCGACCATC GCGGCCTCGG TCGGCGAGCA GGGCAGCGCC
ACTCAGGAGA TCGCCCGCAG CGTGCAGCAG GCGGCGATCG GCACCAATCA GGTTGCGGCC
AGCATCGGCA ACGTCAATCG CGGCGCCGCC GACACCGGCG CGGCGTCGGA CGAGGTGCTG
ACGTCGGCGC AGTTGCTGTC CCACGAAAAC AACCGGCTGC GCGCCGAGGT GGCTAAATTT
CTCGCAACCG TGCGGGTCGC CTGA
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| Protein sequence | MGSWIKHIGL SWKVQLAPAF LVVVMIAIGV FALLSLRANQ QNVDKLVSGP VRLSELAADL
NNTAWTAHAK LYRMAATAAN ETDAAKLTTI IKEAAAGIGQ IPAALGEVEK ALGSDAAKPP
FQKLKAAVAG YQKQAKNAIE MADGDAGSAM LFIKSAEKSF GEIDRLIGDL ILSSTDSRDR
EIAQTGIALD REQWLLGAIL ATASLVGIAF SFLIGRGIAR PVVAMSGAMR ELASGNFEVQ
LPGLDRGDEV GQMARAVEEF KIQAVAKAER EQAERQRQEQ IAAESRRAEL HQLADGFEAA
VGQIVEQVGV ASQALEASAG ALAKGSAETQ QLATMVAAAS SQTSTNVQSV ASATEQMSAS
VEEIGRQVSE SRKIADEAVQ QAEQTDARIA KLAQAANRIG DVTQLITTIA GQTNLLALNA
TIESARAGEA GRGFAVVAQE VKALAEQTAK ATDEISAQIA EMQAATRESV DAIKEIGGTI
GKIAHISSTI AASVGEQGSA TQEIARSVQQ AAIGTNQVAA SIGNVNRGAA DTGAASDEVL
TSAQLLSHEN NRLRAEVAKF LATVRVA
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