Gene Rpal_4271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_4271 
Symbol 
ID6411955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp4594262 
End bp4595965 
Gene Length1704 bp 
Protein Length567 aa 
Translation table11 
GC content67% 
IMG OID642714153 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_001993242 
Protein GI192292637 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAAGCT GGATCAAACA CATCGGACTG TCGTGGAAGG TCCAGCTCGC TCCTGCATTT 
CTGGTCGTGG TGATGATCGC GATCGGCGTG TTCGCGCTGC TGTCTCTGCG CGCCAATCAG
CAGAACGTCG ATAAGCTGGT GTCCGGCCCG GTCAGGCTGT CGGAGCTGGC GGCCGACCTC
AACAACACCG CCTGGACCGC CCACGCCAAG CTGTACCGGA TGGCCGCGAC CGCGGCCAAC
GAGACCGACG CGGCCAAGCT GACCACGATC ATCAAGGAAG CGGCCGCGGG GATCGGTCAG
ATTCCGGCCG CGCTCGGCGA GGTCGAGAAG GCGCTCGGTT CCGATGCCGC CAAGCCGCCG
TTTCAGAAGT TGAAGGCGGC GGTGGCCGGC TATCAGAAGC AGGCCAAGAA CGCGATCGAG
ATGGCCGACG GTGATGCCGG CTCGGCGATG CTGTTCATCA AGAGCGCGGA GAAGAGCTTC
GGCGAGATCG ACAGGCTGAT CGGTGACCTG ATCCTGTCGA GCACCGACAG CCGCGACCGC
GAGATCGCGC AGACTGGCAT CGCGCTCGAT CGCGAACAAT GGCTGCTCGG AGCCATTCTG
GCGACGGCGT CGTTGGTCGG CATCGCGTTT TCGTTTTTGA TCGGCCGTGG CATCGCCCGC
CCGGTGGTGG CGATGTCCGG CGCGATGCGG GAATTGGCCT CCGGCAATTT CGAGGTGCAG
TTGCCCGGGC TCGACCGTGG CGACGAGGTC GGCCAGATGG CCCGCGCCGT CGAGGAGTTC
AAGATCCAGG CGGTGGCCAA GGCCGAACGC GAGCAGGCCG AACGCCAGCG CCAGGAGCAG
ATCGCCGCTG AATCGCGCCG CGCCGAGCTG CATCAGCTTG CCGATGGTTT CGAGGCCGCG
GTCGGTCAGA TCGTCGAACA GGTCGGCGTT GCCTCGCAAG CGCTGGAAGC CTCCGCCGGC
GCGCTCGCCA AGGGCAGCGC CGAGACCCAG CAGCTCGCCA CCATGGTGGC GGCGGCCTCA
TCGCAGACAT CTACCAACGT ACAATCGGTG GCGTCTGCAA CCGAGCAGAT GTCCGCGTCG
GTCGAAGAGA TCGGCCGCCA GGTCAGCGAG TCGCGCAAGA TCGCGGACGA AGCTGTGCAG
CAGGCCGAAC AGACCGACGC GCGGATCGCC AAGTTGGCGC AGGCCGCCAA CCGGATCGGC
GACGTGACCC AGTTGATCAC CACCATCGCC GGCCAGACCA ATCTGCTCGC GCTCAACGCC
ACCATCGAGT CCGCCCGTGC CGGCGAGGCG GGGCGCGGTT TCGCCGTGGT GGCGCAGGAG
GTCAAGGCAC TGGCGGAGCA GACCGCGAAA GCCACCGACG AAATCAGCGC GCAGATTGCC
GAGATGCAGG CCGCGACCCG GGAGTCGGTG GACGCCATCA AGGAGATCGG CGGCACCATC
GGCAAGATCG CCCATATCTC GTCGACCATC GCGGCCTCGG TCGGCGAGCA GGGCAGCGCC
ACTCAGGAGA TCGCCCGCAG CGTGCAGCAG GCGGCGATCG GCACCAATCA GGTTGCGGCC
AGCATCGGCA ACGTCAATCG CGGCGCCGCC GACACCGGCG CGGCGTCGGA CGAGGTGCTG
ACGTCGGCGC AGTTGCTGTC CCACGAAAAC AACCGGCTGC GCGCCGAGGT GGCTAAATTT
CTCGCAACCG TGCGGGTCGC CTGA
 
Protein sequence
MGSWIKHIGL SWKVQLAPAF LVVVMIAIGV FALLSLRANQ QNVDKLVSGP VRLSELAADL 
NNTAWTAHAK LYRMAATAAN ETDAAKLTTI IKEAAAGIGQ IPAALGEVEK ALGSDAAKPP
FQKLKAAVAG YQKQAKNAIE MADGDAGSAM LFIKSAEKSF GEIDRLIGDL ILSSTDSRDR
EIAQTGIALD REQWLLGAIL ATASLVGIAF SFLIGRGIAR PVVAMSGAMR ELASGNFEVQ
LPGLDRGDEV GQMARAVEEF KIQAVAKAER EQAERQRQEQ IAAESRRAEL HQLADGFEAA
VGQIVEQVGV ASQALEASAG ALAKGSAETQ QLATMVAAAS SQTSTNVQSV ASATEQMSAS
VEEIGRQVSE SRKIADEAVQ QAEQTDARIA KLAQAANRIG DVTQLITTIA GQTNLLALNA
TIESARAGEA GRGFAVVAQE VKALAEQTAK ATDEISAQIA EMQAATRESV DAIKEIGGTI
GKIAHISSTI AASVGEQGSA TQEIARSVQQ AAIGTNQVAA SIGNVNRGAA DTGAASDEVL
TSAQLLSHEN NRLRAEVAKF LATVRVA