Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_3545 |
Symbol | |
ID | 3911347 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 4056085 |
End bp | 4058154 |
Gene Length | 2070 bp |
Protein Length | 689 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637885447 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_487151 |
Protein GI | 86750655 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.457552 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.598514 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCACA CCGCTTCGTC GATTGCAGTC GCACCGAAAT CCTCCATTCT CTTCGCGATG TTCACCAATC GCAAAATCGG CACCAAGATC GCCATCGGCT TCGCCGCTAT CCAGGTACTG ATGGCGGTGC TCGCTGTGAT GAACTACTCC AGCTTCGGTA CGATCGGCAG CGCGTTCACC TCGTTCGGAC AGCGCGTCGC GGTCGTCGGC ATCGCCCGGG AGATCGACCG CAGCTTCACC GCCTTTCGCG GTATCGTGCG CGAGTTCGGC ATGACCGGCG ACGAAGCGCT GCTCGGCGAA GCGGAGGAGC GCAAGCAGAA GCTCGCGGAC AGCATCGCGC AAGGCTCGCG CCAGCTCCAG AGTCCCGAGA CGAGGCCGGT GATGGCCGAG ATCGACCGCG AGGTTACCGT CTACGGCAAG GGGTTTGCGG ATGTCGTCAA GCTGCGTCAG GAGCAGAATC GACTGACGCT CGAGGTGCTC GGACCGATCG GGCAGCGCGT GATGAGCCGA CTGGAGCAGT TGCAGAACTC GGCGATGACC GGCGACGGCC GTAGCGGCGA CGCGCTGCTG GTCGGACAGG CCATGAAGCA ACTCCTGACG CTGCGGCTCG CGGCCAGCAA GGTTCTGGGG ATGCGCCTGG AGCGTGAAGC CTCGGTGGCG GCTGAAAAGG CGATTACTGA ACTCAAGACC ACGTTGTCGG CCCTGAAGAT CTCGCTCGAC ACAGCCGGCG AGCAGAGCCA GCTCGTCGCG ATCGACGCCG ACCTCGCCAG CTACACCGAG GCCTTCCGCA GGGCGTCAGC CGACGTCAAT GCGGTCGAGA CGAAGATCGG CGAGATGGCC AAGGTGGCGG ATGCTCTGGC TGCATCGGCC GCGCGGATCA ATCAGATCGG CGCCGCCGAG CAGAAGCAGA TCGGGCAGGA AACGCAGGCG CTGGTCGCCG ACACCAGGAG TCAGACGCTG ATCATCACCA TCACGGCGCA GCTGATCGGC GTGGTTCTGG CCTGGCTGAT CGGCCGCGCG GTGTCGCGCC CGATCATTCA GATGTCGGAT TCGATGCGGG AATTGGCGTC CGGCAATCTC GACGTCGCCG TGCCCGGCTC GGGGCGGTTG GACGAGATCG GCCTGATGGC CTGCACGGTC GAAGTGTTCA AGTCCCACGC GATCGAGGTG CAGCGGCTGA CGCAGGAGCA GGAGGAAGCC GAGCGCCGCG TGGCCGAGGA GCACAAGGCC GAGATGCGGC GGCTGGCCGA CGATTTCGAA GGCGCGGTCG GCCAGATCAT CCAGACCGTG ACCTCGGCCT CGACCGAACT CGAAGCTTCC GCCGGCTCGC TGACTTCGAC CGCCGATCGC TCGCAGGAGC TTGCGACCTC GGTCGCGGCG GCATCCGAGC AGGCCTCTGC GAATGTACAG TCGGTGGCGT CCGCGACCGA GCAGATGTCG TCGTCGATCT CCGAAATCAG CCGTCAGGTG CAGCAGTCGG CGCGGATCGC CGGCGATGCC GTCGATCAGG CGCGCAAGAC CAACGGCCGG ATCGGCGAGC TCGCGGATGC GGCGAGCCGG ATCGGCGCCG TCGTCGATCT GATCAACACC ATCGCCGGGC AGACCAATCT GCTGGCGCTG AACGCCACGA TCGAGGCGGC CCGCGCCGGC GACGCCGGCC GCGGCTTCGC CGTGGTGGCG CAGGAGGTCA AGGCGCTGGC TGAACAGACC TCGAAGGCGA CCGGCGAGAT CAGCCAGCAG ATCAGCGGCA TGCAGACGGC GACGCAGGAG TCGGTCGGCG CCATTCGCGA GATCGGCGGC ACCATCGAGC GGATGTCGGA AATCGCCTCG ACCATCGCCT CCGCGGTGGA AGAGCAGGGT GCTGCGACCC AGGAGATCGC CCGCAACGTG CAGCAGGCGG CGCAGGGCAC GCAGCAGGTC TCGGCCAACA TCACCGACGT GCAGCGCGGC GCCACCGAGA CCGGCACCGC GTCGACGCAG GTGTTGGCCG CGGCGCAGTC GCTGTCGCGC GACAGCAACC GTCTGCGCGA CGAAGTCAGC CGCTTCGTCG AAACCGTGCG GGCGGCGTAG
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Protein sequence | MTHTASSIAV APKSSILFAM FTNRKIGTKI AIGFAAIQVL MAVLAVMNYS SFGTIGSAFT SFGQRVAVVG IAREIDRSFT AFRGIVREFG MTGDEALLGE AEERKQKLAD SIAQGSRQLQ SPETRPVMAE IDREVTVYGK GFADVVKLRQ EQNRLTLEVL GPIGQRVMSR LEQLQNSAMT GDGRSGDALL VGQAMKQLLT LRLAASKVLG MRLEREASVA AEKAITELKT TLSALKISLD TAGEQSQLVA IDADLASYTE AFRRASADVN AVETKIGEMA KVADALAASA ARINQIGAAE QKQIGQETQA LVADTRSQTL IITITAQLIG VVLAWLIGRA VSRPIIQMSD SMRELASGNL DVAVPGSGRL DEIGLMACTV EVFKSHAIEV QRLTQEQEEA ERRVAEEHKA EMRRLADDFE GAVGQIIQTV TSASTELEAS AGSLTSTADR SQELATSVAA ASEQASANVQ SVASATEQMS SSISEISRQV QQSARIAGDA VDQARKTNGR IGELADAASR IGAVVDLINT IAGQTNLLAL NATIEAARAG DAGRGFAVVA QEVKALAEQT SKATGEISQQ ISGMQTATQE SVGAIREIGG TIERMSEIAS TIASAVEEQG AATQEIARNV QQAAQGTQQV SANITDVQRG ATETGTASTQ VLAAAQSLSR DSNRLRDEVS RFVETVRAA
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