| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0233 |
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| Symbol | |
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| ID | 6407877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 251718 |
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| End bp | 253409 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642710141 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001989269 |
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| Protein GI | 192288664 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATTC GCCTTTCGAT CACGTCGATG ATCGTCGCTT TCGCCGTGGT TGTTTTGGTG
AGCCTCACGG CGATGCTGAC CACCAACATC ATGGCGCTCA ATCAATTGCG GGTCGGCGGG
CCGCTGTATT CGCAGATCAA GCTCGGCAAC GATCTGGTCG CCGACATCCT GCCGCCGCCG
GCCTATGTGA TCGAAGCCTA CCTCGAAGCG ACGCTGGCGC TGCGCCGGCC CACCGAGTGG
CGCGCCCATG CCGCCAAGCT CGAGCAGCTT CACCGCGACT ATCTCGATCG GCAGAAATAC
TGGTCAGGCT CAGAGCTCGA TCCGGTCCTG AAGACGCGCC TGACCGTCGA CTCCGACGCG
GCCGTGCAGA AGTTCTGGAG AGCGGCGGAG CAGGAGCTGA TCCCGGCCTT GAGTGCTGGT
GACGAGGCGG CGGCGGAGGC CGCCTACACG AAGCTCGATG CAAGCTATGC GGCACATCGC
GCCATTATCG ACGACATCGT CAAGCGCGCC AACGCCGAGA ACGCCGAGCT TGAAACCGAA
GCCGCTCGTC AGGTCGGCAG CTACTCGACG ATCGTGTGGA TTCTGTCGGG CTTTGCGGCG
CTGCTGATCG CGCTCGGCGT CGCCGGCCTC GCGGTCGGAA TGGTCCGTCC GTTGGTGCGG
CTCACCGCGG CCATGCAGGC GATGGCCGCC GGCATGCTCG ACGTGGTGAT CCCGGGTGCA
GGCCGCAGCG ACGAGATCGG CGGCATGGCC AAAGCGATCA CCGCGATCAA GACCAACGCC
GAGCACAAGG CGAACCAGGA AGCCGCCGAG AAGAGCCGGC AGGAGCACCT GGCCGCCGAG
CAGCGCAAGG CCGATATGGC GCGGCTCGCC GATGGCTTTG AAGACGCGGT CGGAGAGATC
ATCAAGACCG TGTCGTCCGC CGCCAACGAA TTGGAAGCCG CCGCGCACTC GCTGTCCTCG
ACCGCGGCGC GCTCGCTCGA GCTTGCGGTC GGCGTCGCCT CGTCGTCCCA GGAGGCCTCC
GCCGGCGTGC AGTCGGTGGC GTCCGCCAGC GAGGAACTGA CCGCGTCGGT GCATGAGATC
GGCCGGCAGG TGCAGACCTC TGCGAACGTG GCGAATGAGG CCGCCGATCA GGCGCGCCAG
ACCAATGAAC GGGTCAGCGA ATTGTCGGCC GCTGCCGCCC GGATCGGGGA TGTCGTCGAA
TTGATCAGCA ACATTGCCGG GCAGACCAAT CTGCTCGCGC TGAACGCGAC GATCGAAGCC
GCCCGGGCCG GCGAAGCAGG CCGGGGCTTC GCCGTGGTGG CGTCGGAGGT CAAGGCGCTG
GCCGAGCAGA CCGGCAAGGC CACCGGCGAG ATCGGTCAGC AGATCACCGG CATTCAGGCG
GCGACCGGCG AGTCGGTGGC GGCCATCAAG GAGATCTGCT CGATCATCGG CCAGATGTCG
GAGATCTCTT CCTCGATCGC CTCCGCGGTC GAAGAGCAGG GCATGGCCAC CAAGGATATC
GCCGTCAACA TCCAGCACGC CGCCCACGGC ACCTCGCAGG TCGACGAGGA CATCGCCCGC
GTCCAGGCCG GCGCCCGCGA GACCGGCGCA GCCTCGGTGC AGGTACTGTC CGCCGCTAAA
TCGCTGTCGA GCGAGAGCAG CCGCCTGCGC GCCGAGGTCG GCAATTTCCT GGCGTCGGTG
CGCGCGGCCT GA
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| Protein sequence | MKIRLSITSM IVAFAVVVLV SLTAMLTTNI MALNQLRVGG PLYSQIKLGN DLVADILPPP
AYVIEAYLEA TLALRRPTEW RAHAAKLEQL HRDYLDRQKY WSGSELDPVL KTRLTVDSDA
AVQKFWRAAE QELIPALSAG DEAAAEAAYT KLDASYAAHR AIIDDIVKRA NAENAELETE
AARQVGSYST IVWILSGFAA LLIALGVAGL AVGMVRPLVR LTAAMQAMAA GMLDVVIPGA
GRSDEIGGMA KAITAIKTNA EHKANQEAAE KSRQEHLAAE QRKADMARLA DGFEDAVGEI
IKTVSSAANE LEAAAHSLSS TAARSLELAV GVASSSQEAS AGVQSVASAS EELTASVHEI
GRQVQTSANV ANEAADQARQ TNERVSELSA AAARIGDVVE LISNIAGQTN LLALNATIEA
ARAGEAGRGF AVVASEVKAL AEQTGKATGE IGQQITGIQA ATGESVAAIK EICSIIGQMS
EISSSIASAV EEQGMATKDI AVNIQHAAHG TSQVDEDIAR VQAGARETGA ASVQVLSAAK
SLSSESSRLR AEVGNFLASV RAA
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