Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_4101 |
Symbol | |
ID | 3973151 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 4558457 |
End bp | 4560553 |
Gene Length | 2097 bp |
Protein Length | 698 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637927205 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_533946 |
Protein GI | 90425576 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTTAC GTATCCGCAC GCTGCTGCCG TTGATCGTCT GCGCGCTGGC GCTGATGGCA GTGGCCTTCG CCGGGCTCGA TGCCCGCGAC GCGCTGCTGC GCCGGCAGCG TTCCGAGGCC TTCGTCGAGG TCAATCAGAT TTCGCGTCTG CTGCTGCGCA GCGCCGCGCA ATGGGCGACC GAACGCGGCA CCACCAATGC CGCGCTGAAG GCCCCGGAGC CGGCTTCCGC GGCGCGGCTC GCCGCGATCG GCCAGCTACG TAGCGGCGCC GATGCAGCCT TCCGCGAGGC GCTGGCGCAG CTCCGCGCGG TGCCGCAGAT GCAAACCGCG GGTTCGGCGA TCGCCGCCGC CGAGCAGGCG TTCGATTCGC TGCAGACGAT GCGCCGCCGG ATTGACGACG CCATCGCCAA GCCGGCGGCG GCGCGCTCGC CCGAGCTGAT GCAGGGCGCC TTCGCCACCC TCACCGGCGC GATCGACGGC GCCGCCACGC GGTTGCGCCA GACCCTTGAA ACCATCGCCA GTCCGCCCTC GGTGGCGCTG TCGCAGCTCG TCACGCTGCG CCATCTCGCC GCGCAGATGG CCGAAAACGC CGGACGCGAA CGCGGCTATC TCGGCGGCAT CATCAACGCC CGCGCCAAGC TCGGCAGCGA GGCGCTGCGC AACCTGTCGC TGTTCCGCGG CCATATCGAT CTGGCCTGGA ACATGGTGTC GACGCAAAAG CAGCGCGGCG ATCTGCCGGC CGGCATCGGC GAAGCGATCG CCGCGGTGGA GCAGGACTAT TACCGCGTCT ACGACGCCAC CCGCGACGCG ATCTTCGCCG CCGGCGAACG TGGCGATTAC GCGATCAGCG GCGACGATTA CTTCAAGCGC GCCACCGTCG CGGTCGACGC CGTGCTGCGG CTCGGTGAGG CGATCGGCGC CGCCGCCGAT GCCGAGGCGG TCAACGACGC GGCGCGCAGC GACTCCGCGC TGATGCGCAA CGGCGCGCTG CTGGTCGCGG CGCTGGCGCT GGTGTTGGTC AGCCTGTGGC TGACCTTCAT CCGTATCTTG CGGCCGTTGT CGGCGCTGGC GGTGGCGCTG CGCCGGCTCG CCGCCGGCGA ACTGACCATC GTGCTGCCCG GGCTCGAGCG CCGCGACGAA ATCGGCGAGA TGGCGCACGC GGTGCAAGCC TGCAAGGTCA ACGCCGAGAC CAAGGCGCGC GACGAAGCGC ACGCCAAGAT CGCGCAGAGC GAAAGCGCCG CGGCGCAGCG CCGGCAGGAC ATGACGCGGC TCGCCGACGG TTTCGAACAG GCGATCGGGG AGATCGTCGA GACCGTGTCG TCGGCGTCGA CCGAACTCGA GGCCTCGGCC GCGACGTTGA CCGCGACCGC GGAGCGCTCG CAGGCGCTGA CGGTGCGGGT GGCGCAGGCT TCGGAGGAAG CCTCCACCAA TGTGCAGTCG GTCGCCTCGG CGTCCGAACA GATGACCGCC TCGGTCAACG AGATCAGCCG CCAGGTGCAG GATTCGGCGC GGATCGCCGG CGAGGCGGTG GATCAGGCCC GCGACACCAA TGACCGGATC GGCGAATTGG CCAAGGCGGC GGCGCGGATC GGCGATGTCG TCGAGTTGAT CAATGCCATC GCCGGGCAGA CCAATCTCTT GGCGCTGAAT GCCACCATCG AGGCGGCGAG GGCCGGCGAG GCCGGACGGG GATTCGCCGT GGTGGCGTCC GAAGTGAAGG CGTTGGCGGA GCAGACCGCC AAGGCCACCG GCGAAATCGG CCAGCAGGTC GCCGGCATTC AGTCCGCGAC TCAGCAATCG GTCGGCGCCA TCAAGCAGAT CGGCGACACC ATCGGCAGGA TGTCGGAAAT CGCTTCGACG ATTGCCGCGG CGGTCGAGCA GCAGGGGGCC GCGACCCAGG AGATTTCCCG CAACATCCAG CACGCCGCTC AAGGAACGCA GGCGGTGTCC TCGAACATTG TCGACGTCGA ACACGGCGCC GGCGAAACCG GCGCCGCGGC GGTCGAGGTG CTGTCGGCGG CGCATTCGCT GGCCGGCGAC AGCAACCGGC TGAAGCTCGA GGTCGGCAAG TTTCTGCACA CCGTGCGGGC GGCGTAG
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Protein sequence | MSLRIRTLLP LIVCALALMA VAFAGLDARD ALLRRQRSEA FVEVNQISRL LLRSAAQWAT ERGTTNAALK APEPASAARL AAIGQLRSGA DAAFREALAQ LRAVPQMQTA GSAIAAAEQA FDSLQTMRRR IDDAIAKPAA ARSPELMQGA FATLTGAIDG AATRLRQTLE TIASPPSVAL SQLVTLRHLA AQMAENAGRE RGYLGGIINA RAKLGSEALR NLSLFRGHID LAWNMVSTQK QRGDLPAGIG EAIAAVEQDY YRVYDATRDA IFAAGERGDY AISGDDYFKR ATVAVDAVLR LGEAIGAAAD AEAVNDAARS DSALMRNGAL LVAALALVLV SLWLTFIRIL RPLSALAVAL RRLAAGELTI VLPGLERRDE IGEMAHAVQA CKVNAETKAR DEAHAKIAQS ESAAAQRRQD MTRLADGFEQ AIGEIVETVS SASTELEASA ATLTATAERS QALTVRVAQA SEEASTNVQS VASASEQMTA SVNEISRQVQ DSARIAGEAV DQARDTNDRI GELAKAAARI GDVVELINAI AGQTNLLALN ATIEAARAGE AGRGFAVVAS EVKALAEQTA KATGEIGQQV AGIQSATQQS VGAIKQIGDT IGRMSEIAST IAAAVEQQGA ATQEISRNIQ HAAQGTQAVS SNIVDVEHGA GETGAAAVEV LSAAHSLAGD SNRLKLEVGK FLHTVRAA
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