Gene RPC_2742 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2742 
Symbol 
ID3970159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2978047 
End bp2979729 
Gene Length1683 bp 
Protein Length560 aa 
Translation table11 
GC content66% 
IMG OID637925852 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_532609 
Protein GI90424239 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.429688 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCATTT CGCTGAAGAC GTCGTTGATA GCAATCGTCT CGCTGCTGTT GCTGGTTCTG 
GTCGGGCAGG CCTGGACGTC GCTGTCGAAG ATCCAGGCGG TCAATCTGAA GACCGAAGAC
ATCGCATCGA ATTGGCTGCC GTCGGTCAAG CAGCTCGGCG AACTGAAATA CGCCACCGTG
CGCTACCGGG TCGCGAGCCT GCGGGTGTTG CTCGCCAGCG ACGCTGACTA CCGGCGAGAA
TTGGTCGCCA ATCAGGCGAT GCGGGCAGGG AGCGTGGCCG AACTGGCGAA ACGCTACGAG
CAGCTGATCA GCAGCCCGGA TGAACTCAAG GTTTGGAACC ATGTCAAGGA GAAGTGGGCG
GCTTACCTGA AATTGCAGCT GCAGATGTCG GAACTGGCGC TGTCCGGGAA GGGCGGCGAT
CTGTTGAAAG CCGATGACGC CGCGGCGCGG CCGATGTTCG ATGAGGTGCT CAAGCTGCTC
GACGCCGACG TCGAGCTCAA CGACAAGGGC GCCGCCGACG CCACGGCGGA CGCGCGCAAC
TCGTACAACT CCGCCTGGCT GACCACCATC GTGGTCGGTG CGCTCGCGGT GGTGATCGGC
ATCGCCGCGG TGCTGTTCGT GATCTTCCGC GTCGCCGCCG GGCTCACCGG TTTGAACGGC
GCGCTGGCCA AGATGGCCGG CGGTCAACTC GACATCGATA TTCCCGGCGC CGGCCGTGCC
GACGAGATCG GCGACATGGC CAAGAACGTG GTGACCATCC GGCAGAATTC CGAGAACGCC
GCGCGCGCGG ATGCCGAAGC CAAGGCGGAG CGCGACCGCC AAGCCGCCGA GCAGCGCAAA
CAGGAGATGT ACCGCATGGC GGATGATTTC GAAGGCGCGG TCGGCGAGAT CATCGAGACG
GTGTCGTCGG CCTCCACCGA GTTGGAAGCC TCCGCCACCA CGCTGGCCGC CACCGCGGAG
CGGGCGCAGA GCCTCGCCAC CGTGGTCGCG GCGGCCTCCG AAGAAGCCTC CACCAACGTG
CAGTCGGTCG CCTCGGCCAC CGAAGAAATG AGTTCGTCGA TCACCGAGAT CAGCCGCCAG
GTGCAGGATT CCGCCAGGAT CGCCGGCGAG GCCGTCGACC AAGCCCGTCA CACCAACGAT
CGCGTCAGCG AACTGGCGAT GGCGGCGAGC CGGATCGGCG ACGTCGTCGA GCTCATCAAC
AACATTGCAG GGCAGACCAA TCTGTTGGCA CTCAATGCCA CCATCGAAGC CGCCCGCGCG
GGCGAAGCCG GCCGCGGCTT CGCCGTGGTG GCTTCCGAGG TGAAGGCGCT GGCGGAGCAG
ACCGCCAAGG CCACCGGCGA GATCGGCCAG CAGATCACCG GCATTCAGTC GGCGACGCAG
CAGTCGGTCG GCGCGATCAG GGAGATCGGC GCGATCATCG GCAAGATGTC GGAAATTTCC
TCGACCATCG CCTCGGCGGT GGAAGAGCAG GGCGCCGCCA CCCAGGAAAT CTCCCGCAAC
GTGCAGCAGG CGGCGATGGG CACCCACGAG GTCTCCGCCA ACATCACCAA CGTGCAGCAC
GGCGCCGCCG AGACCGGCTC GGCGTCCTCG CAGGTGTTGT CGGCGGCGAA GTCGCTGTCG
CGCGACAGCA ACCGGTTGAA GACCGAAGTC GGCAAATTCC TCAGCACGGT GCGCGCGGCC
TGA
 
Protein sequence
MRISLKTSLI AIVSLLLLVL VGQAWTSLSK IQAVNLKTED IASNWLPSVK QLGELKYATV 
RYRVASLRVL LASDADYRRE LVANQAMRAG SVAELAKRYE QLISSPDELK VWNHVKEKWA
AYLKLQLQMS ELALSGKGGD LLKADDAAAR PMFDEVLKLL DADVELNDKG AADATADARN
SYNSAWLTTI VVGALAVVIG IAAVLFVIFR VAAGLTGLNG ALAKMAGGQL DIDIPGAGRA
DEIGDMAKNV VTIRQNSENA ARADAEAKAE RDRQAAEQRK QEMYRMADDF EGAVGEIIET
VSSASTELEA SATTLAATAE RAQSLATVVA AASEEASTNV QSVASATEEM SSSITEISRQ
VQDSARIAGE AVDQARHTND RVSELAMAAS RIGDVVELIN NIAGQTNLLA LNATIEAARA
GEAGRGFAVV ASEVKALAEQ TAKATGEIGQ QITGIQSATQ QSVGAIREIG AIIGKMSEIS
STIASAVEEQ GAATQEISRN VQQAAMGTHE VSANITNVQH GAAETGSASS QVLSAAKSLS
RDSNRLKTEV GKFLSTVRAA