| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2142 |
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| Symbol | |
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| ID | 6409802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2312671 |
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| End bp | 2313957 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642712026 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001991138 |
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| Protein GI | 192290533 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.293169 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTATGG GACGTCAAAA GCGACAGGAG CTGCTGCAGA AGGCCGAATG GCTCGACACC
CTCTCGCTTC ACTGCGGCAT CGGATTGTGG GACGCGATCC TGTACGAAGG CGATGCGATG
CATCCCAAGG CGCGTTGGAC CTGGTCGTCC GAGTTTCGCC GGCTGTGCGG CTACAGTTCT
GAAACCGAGT TTCCCAACAT CGTGCAATCC TGGTCGGATC GCCTGCATCC CGACGATGTC
GCGCCGACCT TCGCGGCGTT CACCCAGACC TGCCAGACCG GCATCGGTTA CGACGTCAAG
TATCGCCTCA AGGTCAAGGA CGGCAGTTAT CGCTGGTTCC GTGCGACCGG CGGCGTCGTG
CTCGACGAGA ACCGCAAGCC GCGGCGCGCC TGCGGTTCGC TGGTCGACAT CGATGAACTG
GTGAAGGCGG AAAACCAGAA GCGGGACTCG ATCCATCAGC TCGCCAACGA TTTCGAAGGC
GCGATCGGCA AGATCGTCAG GACCGTGTCG TCGGCTTCCG CCGACCTCGA AAGCTCGGCA
CGTCAGCTCG CGACCACGGC CGACACCTCG CAGCACCTCG CCGGCAACGT CGCGGCGGCC
TCCGAAGAAG CCACCAGCAA CGTGCAGTCG GTCGCGTCGG CGACTGATCA GCTGTCGTCG
TCGATCCGCG AGATCAGCCA GCAGGTTCAG GAATCCGCGC GGATCGCCGG CGAGGCCGTC
GGCCAGGCGC GCAACACCAC CGATCGCGTC AGCGAACTGT CGAAGGCTGC GACGCGGATC
GGCGACGTCG TCGAACTGAT CAACACCATC GCGGGCCAGA CGAACCTTCT GGCACTGAAC
GCCACCATCG AGGCGGCGCG CGCCGGCGAA GCCGGTCGTG GTTTCTCGGT CGTCGCCGCC
GAAGTGAAGG CGCTGGCGGA GCAGACCGCG AAGGCCACCG GCGAGATCGG CCAGCAGATC
AGCCGCATCC AGTCGGCGAC GCAGGAGTCG GTCGGCGCGA TCAGCGAGAT CAGCGGCACC
ATCGAGAAGC TGTCGGAAAT CTCCGCGCAC ATCGCGTCGG CGGTCGAAGA GCAGGGCGCG
GCGACGCAGG AGATCTCGCG CAACATTCAG CAGACCGCGC AAGGCACCGA GCGGGTCTCC
GCCACCATCC TGGATGTCCG GCGCGGCGCG GTCGAAACCG GCACGTCGTC CACGCAGTTG
CTCTCGTCCG CGCAGTCGCT GTCGCAGGAA AGCGGCCGGT TGGAGGACGA AGTGAGCCGC
TTCCTCCGCA CCGTGCGCGC CTCGTAG
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| Protein sequence | MFMGRQKRQE LLQKAEWLDT LSLHCGIGLW DAILYEGDAM HPKARWTWSS EFRRLCGYSS
ETEFPNIVQS WSDRLHPDDV APTFAAFTQT CQTGIGYDVK YRLKVKDGSY RWFRATGGVV
LDENRKPRRA CGSLVDIDEL VKAENQKRDS IHQLANDFEG AIGKIVRTVS SASADLESSA
RQLATTADTS QHLAGNVAAA SEEATSNVQS VASATDQLSS SIREISQQVQ ESARIAGEAV
GQARNTTDRV SELSKAATRI GDVVELINTI AGQTNLLALN ATIEAARAGE AGRGFSVVAA
EVKALAEQTA KATGEIGQQI SRIQSATQES VGAISEISGT IEKLSEISAH IASAVEEQGA
ATQEISRNIQ QTAQGTERVS ATILDVRRGA VETGTSSTQL LSSAQSLSQE SGRLEDEVSR
FLRTVRAS
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