| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2025 |
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| Symbol | |
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| ID | 6409685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2197148 |
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| End bp | 2199214 |
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| Gene Length | 2067 bp |
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| Protein Length | 688 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642711911 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001991023 |
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| Protein GI | 192290418 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0110809 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTAGTG CTCAATCGTC GCCTGTCCCG CACAGTTCTG CGGGCCTGTT TTCGTTCTTC
ACCAACCGCA AGATCGGGGT GAAAATCGCC ATCGGCTTCG CCGCCGTGCA GGTGCTGATG
GCCGTCCTGG CCGTCCTCAA TTATTCCAGC TTCGGCAAGG TCGGTGATGC GTTCGCCAAG
TTCGATCAGC GGGTCGGAGT CGTCGACGCC GTGCGCGACG TCGAACAGGA TTTCAATTCG
TTTCGCCGCA CCGTGCGCGA ATACAGCCTC ACCGGCGAAG ACTTCCTGAT CGCCGAAGCC
ACCAAACGCC GCACTGAGCT GCAGGATCAC ATCAAGCAGT CGCTGCAGCA GATTCACGGG
TCCAGCCGTC ACGCCGCGAT GGCCGACCTC AGCAACAAGG TCGATTCGTA TGTCGGCCAG
TTCGATAGCC TAACCAAGCT ACGCCAGGAT CAGAACCGTC TGTCGCTGAC CGTGCTGGGG
CCGGTCGGAC AGCGGATCGT CAGCAAGCTC GAGCAACTGC AGTCCTCCAC CATGAGCGGT
GACGGCAACA GCGATCAGGC GCTCCTGGTG GCGCAGTCGC TGAAGCAGTT CCTGCTGCTG
CGCCTCGGCG CCGCCAAGGT GCTGGGTATC CGCCTCGAAA AGGCCGCGCA GGCGAGTGCC
GAAAAGGCGC TGGCTGATTT CCGGACGTCG CTGTCGACGA TGAAGACCGC GCTGACCGGC
GACGCTGAGC GCAAGCAGTT GGCCGCGATC GAGGCGGATC TTGCCATCTA CGCGGACGGC
TTCCAGCAGT CGGTGCGCGA CGTCAACGAC ATCGACGCGA CCATCGGGTC GATGACCAAG
GTCGCCGAGT CGCTCGCGGG CGACGCTGCC GCGATCAAGC AGTCCGGCGT CGCTGAATCG
AAGCAGATCG GCCATCAGAC CGAAGCGCTG ATCGGCGAGA CCCAGAACCA GATCGTATTC
ATCACTCTCG GTGCGATGGC GATTGGTCTG GTGCTCGCCT GGCTGATCGG TCGTGCGGTG
TCCCGTCCGA TCGTGGCGAT GTCCGGAGTG ATGAAGGAGC TCGCCGCCGG CAACACCAAT
GTCGAGATCG TCGGCTCCGG CCGCTTGGAC GAAATCGGCC TGATGGCCTG CACGGTCGAA
GTGTTCCGCA ACCATTCGAT CGAATTCGAC CGGCTGAAGG CCGAGCAGGA GGAAGCCGAG
CGCCGTGTCG CTGCTGAGCA CAAGGCGGAG ATGCAGCGCC TCGCCGATCA CTTCGAAGGC
GCGGTCGGCG AGATCATCGA CACTGTGACC TCTGCTTCGA CCGAACTCGA AGCTTCGGCC
GGTACGCTGA CGACCACCGC CGAACACTCG CAGATGCTCG CCGGCTCTGT CGCCGCGGCT
TCCGAGCAGG CCTCCGCCAA TGTGCAGTCG GTGGCGTCGG CCACCGAAGA GATGGCGTCC
TCGATCACTG AGATCAGCCG TCAGGTGCAG GAAGCGGCCC GGATCGCCAA CGAAGCCGTG
GAGCAGGCGC GCAAGACCAA CGACCGGATC GGTACGCTCG CGCAGGCGGC GAACCGGATC
GGCGACGTGG TCGATCTGAT CAACACCATC GCCGGCCAGA CCAATCTGCT TGCGCTCAAC
GCCACGATCG AGGCGGCGCG CGCGGGCGAT GCCGGTCGCG GTTTCGCGGT GGTGGCACAG
GAAGTGAAGG CGCTCGCCGA ACAGACCGGA AAGGCGACCG GGGAGATCAG CTCCCAGATC
GGCAGCATGC AATCGGCGAC GCAGGAGTCG GTCGGTGCGA TCCGCGAGAT CGGCGGCACC
ATCGAGCGGA TGTCGGAGAT CGCCTCGACG ATCGCGTCCG CGGTCGAAGA GCAGGGCGCT
GCGACGCAGG AGATCTCGCG CAACGTACAG CAGGCTGCGC GCGGCACCCA CGAGGTCTCG
TCCAACATCG CCGACGTCCA GCGCGGTGCG ACCGAGACCG GCTCGGCCTC GTCGCAAGTG
CTGTCCGCCG CACAGTCGCT GTCGCGCGAC AGCACACGCC TGAAGGACGA GGTCGATCGC
TTCATGGAAA CGGTGCGGGC GGCGTAA
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| Protein sequence | MPSAQSSPVP HSSAGLFSFF TNRKIGVKIA IGFAAVQVLM AVLAVLNYSS FGKVGDAFAK
FDQRVGVVDA VRDVEQDFNS FRRTVREYSL TGEDFLIAEA TKRRTELQDH IKQSLQQIHG
SSRHAAMADL SNKVDSYVGQ FDSLTKLRQD QNRLSLTVLG PVGQRIVSKL EQLQSSTMSG
DGNSDQALLV AQSLKQFLLL RLGAAKVLGI RLEKAAQASA EKALADFRTS LSTMKTALTG
DAERKQLAAI EADLAIYADG FQQSVRDVND IDATIGSMTK VAESLAGDAA AIKQSGVAES
KQIGHQTEAL IGETQNQIVF ITLGAMAIGL VLAWLIGRAV SRPIVAMSGV MKELAAGNTN
VEIVGSGRLD EIGLMACTVE VFRNHSIEFD RLKAEQEEAE RRVAAEHKAE MQRLADHFEG
AVGEIIDTVT SASTELEASA GTLTTTAEHS QMLAGSVAAA SEQASANVQS VASATEEMAS
SITEISRQVQ EAARIANEAV EQARKTNDRI GTLAQAANRI GDVVDLINTI AGQTNLLALN
ATIEAARAGD AGRGFAVVAQ EVKALAEQTG KATGEISSQI GSMQSATQES VGAIREIGGT
IERMSEIAST IASAVEEQGA ATQEISRNVQ QAARGTHEVS SNIADVQRGA TETGSASSQV
LSAAQSLSRD STRLKDEVDR FMETVRAA
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