Gene BBta_2900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_2900 
Symbol 
ID5150689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3006817 
End bp3008844 
Gene Length2028 bp 
Protein Length675 aa 
Translation table11 
GC content68% 
IMG OID640557779 
Productputative methyl-accepting chemotaxis receptor/sensory transducer (chemoreceptor) 
Protein accessionYP_001238933 
Protein GI148254348 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.142675 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.173139 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTGA ATCGGATCGG CTACAAACTC GGGCTCGCCG GCGCCATCGG CGCCACTCTC 
GCGGTCGGTA TGATCGTAAA TCAGATGATG GCCGAGAGTG CGGTCAGTGC GGCCAATCAG
CGGGCCGAGC GTGCGCGGCG TGTGGTCGAG AGCGTCATGT CCGCCAGCAT CAACATGCAG
CAGACCCAGC TTGCGGGGCG CTCGGCCCGG CTGGCGCGGG TGCCGGCCGA TGCCGAGAAG
GCGGCCGCCG AGATCCAGCA GTTCTCCACC GGCATGGTCA CGGATATCGA TGGGGCGCTG
GCCAATGTCA GCACCGCCGA GAACCGCAAC CGGCTGACCC GGCTGAAGGA ACTGATGAAG
AGCTATGCCG CCGGCGCGGT CGAGCTGGCG CAGGCCCAAC AGGCGCTGCT GCTGCAGATC
GACAAGCGCG GCGCGGTGTC TGCCGAATGG AGCAAGGGAC TTCAGGCCAT CCTGGGCTCG
CCGACCCTGC CGAACCTGGC GTTTCGTGAG CGCGTCGAGC GGCAGCTGCA TGCCGCCGAT
GCCAAGCTGA ACTTCATGCG CTCGCAGGCC TGGCGGTTCG GCGTCACCGG CGACGCCGGC
GCGATTACCC AGCTGAAACA GACGGTACCG ATCCTGAAGA GCTCGCTGAC CGACGCCCGC
ATGCTCGCCG ACGATCGCGA GATCCAGGCC GCGATCACCA GGCTCAACGG CATCGCCTCG
GACTTCGTCG TCGCCAATGA CGAGGTCGTC AAGTTCGAGG GGATCAAGGA GGCGCTGCTG
CGCGACCGCA CTTTGGTTTA TCTCGGCGAG GCGAGCGAGC TGATGACGGC GTCCATCCAG
GATGCCCGCG CCCGCAATGC CAGCGCCCGA TATGATGCCG ACGAGGTGGC GGCGCAGGCG
AGCCGCATCA CGCAGATCGT CGGGCTGGCG GTGCTGCTCT CGGTGATCTC ATCGGTGGTC
TTCTCGTTCC TCGGTATCGC GCGGCCGTTG ACCCGGCTGA ATGCGGCGCT CGGCGAGATG
GCGCGCGGGC GGCTCGACAT TGTCATCCCC GGCGCCTCGC GCGGCGACGA GATCGGCGAT
CTCGCCAAGA CCGTCACCGT GATCCGCGGC AACGCCGAGG AGCAGGCGCG CGCCGAGGCC
GAGGCCAAGA ACACGCAGGA TGCGATGGCT GAGCGCCAGC GCAAGGCCGA CATGCAGCGC
CTCGCGCAAC AGTTCGAGGC GGCGGTCGGC GAGATCGTGA ACACCGTATC GGCCGCATCC
GGCCAGCTCG AGCAGTCTGC GACCACGTTG ACCCAGGCGG CGACACGCTC GCAAGGCCTG
ACGACGGCCG TTGCCACGGC CTCCGAAGAA GCGACGACCA ACGTGCAGTC GGTCGCCTCG
GCGACCGAGC AGATGGCATC GTCGGTGACC GAGATCAGCC GTCAGGTGCA GGAATCTGCG
CGGATCGCCA ATGAGGCCGT CGGCCAGGCC CGCACCACCA CGGGTCGTGT GAGCGAGCTG
TCGAAGGCGG CAACCCGCAT CGGCGACGTC GTCGAGCTGA TCAACACCAT TGCCGGCCAG
ACCAACCTGC TGGCGCTCAA CGCCACCATC GAGGCGGCGC GCGCCGGAGA GGCCGGCCGC
GGCTTTGCGG TGGTCGCCTC CGAGGTGAAG GCGCTGGCCG AGCAGACCGC CAAGGCGACC
GGTGAAATCG GTCAGCAGAT CTCGAGCATC CAGGTCGCGA CCCAGGAGTC GGTCAGCGCG
ATCAAGGAGA TCTCGGCGAC GATCGAGAAG CTGTCGGAGA TCTCCTCGAC CATCGCGGCG
GCGGTGGAAG AGCAGGGCGC GGCGACCCAG GAAATCTCCC GCAATGTGCA GCAGGCCGCC
CATGGCACGC AGCAGGTCTC GGCCAACATC GCCGACGTCG AACGCGGCGC CGCAGAGACC
GGATCGGCCT CGGCGCAGGT GCTTGCCGCT GCCCAGGCGC TGTCCGGCGA CAGCAGCCGT
CTGCAGCAGG AGGTCGCAAG CTTCCTCGGC TCGGTGCGGG CGGCGTGA
 
Protein sequence
MKLNRIGYKL GLAGAIGATL AVGMIVNQMM AESAVSAANQ RAERARRVVE SVMSASINMQ 
QTQLAGRSAR LARVPADAEK AAAEIQQFST GMVTDIDGAL ANVSTAENRN RLTRLKELMK
SYAAGAVELA QAQQALLLQI DKRGAVSAEW SKGLQAILGS PTLPNLAFRE RVERQLHAAD
AKLNFMRSQA WRFGVTGDAG AITQLKQTVP ILKSSLTDAR MLADDREIQA AITRLNGIAS
DFVVANDEVV KFEGIKEALL RDRTLVYLGE ASELMTASIQ DARARNASAR YDADEVAAQA
SRITQIVGLA VLLSVISSVV FSFLGIARPL TRLNAALGEM ARGRLDIVIP GASRGDEIGD
LAKTVTVIRG NAEEQARAEA EAKNTQDAMA ERQRKADMQR LAQQFEAAVG EIVNTVSAAS
GQLEQSATTL TQAATRSQGL TTAVATASEE ATTNVQSVAS ATEQMASSVT EISRQVQESA
RIANEAVGQA RTTTGRVSEL SKAATRIGDV VELINTIAGQ TNLLALNATI EAARAGEAGR
GFAVVASEVK ALAEQTAKAT GEIGQQISSI QVATQESVSA IKEISATIEK LSEISSTIAA
AVEEQGAATQ EISRNVQQAA HGTQQVSANI ADVERGAAET GSASAQVLAA AQALSGDSSR
LQQEVASFLG SVRAA