Gene Nwi_2996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_2996 
Symbol 
ID3675380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp3242656 
End bp3244752 
Gene Length2097 bp 
Protein Length698 aa 
Translation table11 
GC content63% 
IMG OID637714562 
Productmethyl-accepting chemotaxis protein 
Protein accessionYP_319598 
Protein GI75677177 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCGA AGATAAGCGT TATATTGCCC GCGATCGTCT CCGCACTCGT CATGATAGGC 
GCCCTTTCCG CCGGAATCAT GGCCTATCAG GCATACGAAC AGCGACAGCA ATCCGAGGCG
TTCCTCGAAG TGAACCACAT CTCGCAATTG CTGTTGCGAA GCGCGGGACA ATGGGCTGTG
GAGCGCGGAT TGACCAACGC TCCTCTCATG TCGCCCGATG CCCTGCCCGC TGAACGCCGC
CCTCAGATTC TTGAAGCACG GCAAACCGCC GATCGCGCAT TTTCCGAGGC TGCTCGACTT
CTGCGCGAAC ATACGGCGAT GAAATCCGCG GAATCCCGGA TCTCGGAAGC CGAGAGCGCT
TTTCAGGCGT TCGTCGGGTT TCGCGCGCGC CTCGACGAGA ATCTCGCCAG GCGAGGACCG
GAACGGAGCG CGGAGGTCGT GGAGAGCTTC GCGCCGACCA TCACCAGGCT GATCGAGGTT
TCCGGCAACA CGCTGCGGCT CACGCTGGAA ACACTGACGC GTCCGCCCAC CGCGGCTCTG
ACGCAACTGG TCAGCTTGCG GCATCTGACT GCGCAGATGG CGGAAAACGC CGGAAGGGAG
CGCGCGCTCT TCGGAGGAAT TGTCAGCTCC CGCGCCAGGC TTTCCACAAG CAGCTTGCGG
ACCATCGCGC GTTCACGCGG CTATGTGGAG CTGGCATGGG AAACCATCTC GCCAATCCGG
ATGCGCGCCG ACCTGCCGCC AAAAGTCGCG GATGCAATCT CCGGCGTCGA GAAGGATTAT
TTCCAGCGCT ACGGCCAGAC TCGCGACGCC GTATTCGCGG CATCCGAGAC AGGTGAATAC
AAGATCAGCG GCAACGACTA TGTCGCGCAG GCGACGACCG CGATCAATTC AATACTCCGG
CTGGCCGATG CGGTTGGGGA GGCCGCCGAC CAGGAGGCGG CCAGGGTAGC CGCGGGCAGC
CGGTCCCAAC TGCTCAGCTC CGCACTGATA TTGCTGGGCT GTCTCGCTCT CGCCCTTATC
AGCTTCTGGA TCGCGTTCTC GCGCATCCTG CGGCCGATGG CGGCGCTGAC GACAGCCATG
GGTGAACTCG CGAAAGGCAA CTTCGCCGTC GTCCTGCCCG GACTGGAGCG CAAGGACGAG
ATGGGCGACA TGGCGCGCGC GGTCGAAACC TTCAAGATCA AGGCCGAGCA GAAGGCGCGA
GATGAAGCGG AGGCCAAGAT GAAGCAGGAT CAGTTGGCCG CGCAGCAGCG CAAGGCGGAC
ATGCACCGTC TCGCCGACGG TTTCGAAGCG GCGGTCGGCG CGGTGATCCA GACCGTATCC
TCGGCGGCGA CCCAGTTAGA GGATTCGGCG ACCGCCCTGA CCCAGACGGC CGAGCAAACC
CACCAGCTCT CCTCCGCCGT GGCGGCGGCG TCCGAGGAAG CGACGGTCAA CGTTCAGTCC
GTGGCTTCAG CAAGCGAGGA AATGGCGGCT TCCGTGAACG AGATCAGCCG GCAGGTGCAG
GAAGCATCGA GGATCGCAAG CGACGCGGCG CAGAAGGCCC ATCGCGCCGA CCAGCGCATC
AATTCGCTGT CGCAGGCGTC CACGAAGATC GGAGACGTGG TTGAACTGAT CAACACGATC
GCGAGCCAGA CCAATCTCCT GGCCCTCAAC GCAACCATCG AGGCCGCTCG CGCAGGTGAA
GCCGGCCGTG GCTTTGCCGT CGTGGCGTCC GAAGTGAAGG CGCTGGCCGA GCAGACCGCG
AAAGCCACCG CTGAAATCGG CCAGCAGATC ACAAGTATCC AGTCCGCGAC CAACGACTCC
GTCGATAACA TGAAGGAGAT CGGCATCGTC ATCGGCAGGA TCGCGGAGAT CTCCGCCACG
ATCGCTTCGG CCGTCGAAGA GCAGGCGTCC GCCACTCAGG AAATATCCCG CAACGTGCAG
CAGGCCGCGA CCGGAACCTC GGAAGTGTCC TCCAACATTA TCGAGGTGAG CAACGGAGCT
TCCGTGACGG GCAGCGCCTC CACGCAGGCC CTCGCCGCGG CGAAGTCTCT GGCCGGAGAC
ACTGATCGCC TCAAGCAGGA GGTCGAGAAA TTTCTCGCAA CTATCAGAGC CGCCTGA
 
Protein sequence
MKAKISVILP AIVSALVMIG ALSAGIMAYQ AYEQRQQSEA FLEVNHISQL LLRSAGQWAV 
ERGLTNAPLM SPDALPAERR PQILEARQTA DRAFSEAARL LREHTAMKSA ESRISEAESA
FQAFVGFRAR LDENLARRGP ERSAEVVESF APTITRLIEV SGNTLRLTLE TLTRPPTAAL
TQLVSLRHLT AQMAENAGRE RALFGGIVSS RARLSTSSLR TIARSRGYVE LAWETISPIR
MRADLPPKVA DAISGVEKDY FQRYGQTRDA VFAASETGEY KISGNDYVAQ ATTAINSILR
LADAVGEAAD QEAARVAAGS RSQLLSSALI LLGCLALALI SFWIAFSRIL RPMAALTTAM
GELAKGNFAV VLPGLERKDE MGDMARAVET FKIKAEQKAR DEAEAKMKQD QLAAQQRKAD
MHRLADGFEA AVGAVIQTVS SAATQLEDSA TALTQTAEQT HQLSSAVAAA SEEATVNVQS
VASASEEMAA SVNEISRQVQ EASRIASDAA QKAHRADQRI NSLSQASTKI GDVVELINTI
ASQTNLLALN ATIEAARAGE AGRGFAVVAS EVKALAEQTA KATAEIGQQI TSIQSATNDS
VDNMKEIGIV IGRIAEISAT IASAVEEQAS ATQEISRNVQ QAATGTSEVS SNIIEVSNGA
SVTGSASTQA LAAAKSLAGD TDRLKQEVEK FLATIRAA