Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_3379 |
Symbol | |
ID | 3970539 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 3757403 |
End bp | 3759166 |
Gene Length | 1764 bp |
Protein Length | 587 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637926491 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_533239 |
Protein GI | 90424869 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.787169 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGCGGT TTATTCAGAA CGTTCGGATT GGCACCAAGC TTTGGATCGC GTCTGCGCTC GGCATTCTGC TGATCGGCTG CATGATCTAC GGGCAGGTGA CAGGCAGCGC GAGGGTGCGT CAGGCCCAGG ACAACAGCGT TCGCGTGTTG GCGCTTGAGG GGGCCGCTGC CGAGGCCAAG GCGTCGATGC GGGGCATGCA GGTCGGCTTG GCCGCCATCG TGCTCGCGTC AAACCCGGAG GCGATGCGCG CGGCAAGCGA CTCTTTCGCC GCACAGCAGA AGTCCTCGAT CCAGTTCACC GCAGAGCTGG CCCAGTCGGT CCGGCTCCCG GAGAACAAGC AGCGCACCGC TCGGCTGACC GCGCTGATCG GGGAATTCGC CGGCGCGACG CAGCAGATCG CTGCGTTGCG CGGCGAGGTC CATGCCCTGG AGGTCGGCGC CATGGCGGCC GCCGAAGCTT CCACCGAGGC GGCCAAGAAG ATCCGCGCGC TCAACGACAA GGTGGCGCTG ATCCGTAAGG ACAAAGTGAC GCCGATCGCG GCGGAAATGG AGCGCCTAAA CGAAGAGCTG ATTGCCTCGA GCAAGCGGCT CAGCGAGCAC ACCACCGCCG CGGCGACCGA GGAAGCGATA TCGGTCGAAC GTTGGGCGCT GGCGATCGGC ATCGCCAACG CGCTGTTGAT GATCGCCACC TCGATCTTCA CCTCCACCAC GATCGCGCGG CCGATGCAGG CGTTGAGCCG GGCGATGGCC GAGCTGGCCG ACGGCAATTT CGGCGTGGTG CTGCCGGGGC TTGGCCGCAA GGATGAGATC GGCGACGTCG CCAGCGCGGT GGAGACGTTC AAGATCAAGG CCGAGCAGAA GGCGCAGGCC GAGGCCGAAG AAAAGGCGCA GCAGGATCAG TCCGCCGCCG CCCAGCGCAA GCGCGACATG ATGAAGCTCG CCAACGAATT CGAAGGCGCG GTGGGCGAAA TCGTCGAGAC CGTGTCGTCG GCCTCGGCGG AATTGGAGAG TTCGGCCTCC ACCCTGACCT CGACCGCCGA ACACGCCCAG CATCTCGCCA CGATGGTGGC CTCGGCTTCC GAAGAAGCCA CCACCAATGT GCAGTCGGTG GCCTCGGCGA CCGAGGAGAT GAGTTCGTCG ATCACCGAAA TCAGCCGGCA GGTGCAGATG TCGGCGCGGA TCGCCGGCGA AGCGGTGCAG CAGGCGCAAA AGACCAACAA CCGGGTCGGC GAGCTCGCCA AGGCGGCGAG CCGGATCGGC GACGTCGTCG AGCTGATCAA CACCATCGCC GGCCAGACCA ATCTGCTGGC GCTGAATGCG ACCATCGAAG CCGCCCGCGC CGGCGAGGCC GGTCGCGGCT TCGCGGTGGT GGCTTCGGAA GTGAAGGCCT TGGCCGAGCA AACCGCGAAA GCCACCGGCG AAATCGGCCA GCAGATCACC GGCATTCAGG CGGCGACCCA GGAATCGGTG GGCGCGATCC GGGAAATCGG CGACACCATC AGCAAGATGT CGGAGATCGC CTCGACCATC GCGGCCGCGG TCGAACAGCA GGGCGCGGCG ACGCAGGAAA TCTCCCGCAA CGTTCAGCAG GCCGCGCAGG GCACCCACGA GGTGAGTTCG AACATCACCG ACGTGCAGCG CGGCGCCAGC GAGACCGGCA CCGCCTCGTC GCAGGTGCTC TCGGCGGCGC AGTCGCTGTC GCGCGACAGC AATCGATTGA AAGTCGAAGT CGGTAAATTC CTGCAGACGG TGAGGTCAGC CTGA
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Protein sequence | MLRFIQNVRI GTKLWIASAL GILLIGCMIY GQVTGSARVR QAQDNSVRVL ALEGAAAEAK ASMRGMQVGL AAIVLASNPE AMRAASDSFA AQQKSSIQFT AELAQSVRLP ENKQRTARLT ALIGEFAGAT QQIAALRGEV HALEVGAMAA AEASTEAAKK IRALNDKVAL IRKDKVTPIA AEMERLNEEL IASSKRLSEH TTAAATEEAI SVERWALAIG IANALLMIAT SIFTSTTIAR PMQALSRAMA ELADGNFGVV LPGLGRKDEI GDVASAVETF KIKAEQKAQA EAEEKAQQDQ SAAAQRKRDM MKLANEFEGA VGEIVETVSS ASAELESSAS TLTSTAEHAQ HLATMVASAS EEATTNVQSV ASATEEMSSS ITEISRQVQM SARIAGEAVQ QAQKTNNRVG ELAKAASRIG DVVELINTIA GQTNLLALNA TIEAARAGEA GRGFAVVASE VKALAEQTAK ATGEIGQQIT GIQAATQESV GAIREIGDTI SKMSEIASTI AAAVEQQGAA TQEISRNVQQ AAQGTHEVSS NITDVQRGAS ETGTASSQVL SAAQSLSRDS NRLKVEVGKF LQTVRSA
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