| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5120 |
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| Symbol | |
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| ID | 6412814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 5503504 |
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| End bp | 5505195 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642715005 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001994084 |
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| Protein GI | 192293479 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCGCCA AGATCACCAT ACGTACCAAG ATTACTGCGC TGGTCGCTGC GCTGCTGATT
GCCCTGTCGG GTCTCGGTGC ACTGGCGGTG GTCGAAATGC GGTCGTTGAA CGCCGCATCG
ACCGACATCG CCACCAACTG GCTGCCGAGC GTCCGGATTC TTGGCGAAAT GCGCGCCTAT
CTGCTCGGTT ATCGCGGCGC ATTGCGCGAT CACATCCTGG ATCTGAGCGC CGAGGGTAAG
GATGCTGCTG ACAAGCGGAT GGCCACGACC CAGGCATCGC TGGATAAGGC GCTCAAGGAC
TACGACAAGC TGGTGTCCTC TTCAGAGGAG CGGGCTTTAT ACGAGGACTT TGCCAAGGGA
TGGACCGACT ACAAGGCCGC CGTCGGAAAG GCACTCGAGA TCTCGCGCGG CAGCGTGGGC
CAATTTCCAG CGTCGGCATG GGACTACGTG AAGAAGAACC TGGTCCCGAT CGCGACTCGG
ATGGATGAAA CGCTGCAGAA GGATATCGAC CTCAACAACA AGGGAGCGCA GACGTCGACA
GAGACGGCTG ACACCACCTA CAGCTTCGGC TTTGGCCTGG TCGTCACGAT CCTCGCGCTT
GCCTTTGCGC TCGGCATTGC CATGAGCGTG CTGGTGATCC GCGACATCAC CCTCGCCATC
GCCTCGATCA TCTCGCCGAT GCAGGAGCTC GGGAAGGGCA ATCTCGCCGC CGACGTGCCG
CATCGCGGCG AGTCGACAGA AATCGGCCGG ATGGCGGACG CGCTGCAGGT CTTCAAGGAA
GCGCTGGTCG CCAAGCGTGA TGCCGATGCG GCGGCCGCCA AGGAAGCCGA GGAGAAGATC
GCCCGCGCCC AGCGCGTCGA CAGCGCAACC CGCCAGTTCG AGCACGCCAT CGGCGAGATC
GTCGACACCG TGTCGTCGGC CTCCACCGAG CTCGAAGCGT CCGCCAGCAC GCTGACCTCG
ACCGCCGAGC GCGCCCAGGA ACTGGCGACG TCGGTGGCCG CGGCCTCTGA AGAAGCCTCG
ACCAACGTGC AGTCGGTGGC GTCGGCGACC GAGGAGATGA CCTCGTCGAT CACCGAGATC
AGCCGTCAGG TGCAGGAATC GGCACGCATC GCCAACGATG CGGTCGATCA GGCGCGTCGG
ACCAACGAGA GCGTCAGCGA TCTGTCGCAC GCCGCGGCGC GGATCGGCGA TGTGGTCGAG
CTGATCAACA CCATCGCCGG CCAGACCAAC CTGCTGGCAC TCAATGCCAC CATCGAGGCG
GCACGTGCCG GCGAGGCCGG TCGCGGCTTC GCGGTGGTGG CGGCCGAGGT GAAAGCGCTG
GCGGAGCAGA CCGCCAAGGC CACCGGCGAG ATCAGCCAGC ACATTACCGG CATTCAGACT
GCGACCGGCC AATCGGTCGA TGCCATCAAG GAGATCGGTC AGACCATCGG CCGGATGTCG
GAGATCGCCT CGACCATCGC CTCGGCGGTG GAAGAACAGG GCGCCGCCAC GCAGGAAATC
TCCCGCAACG TGCAGCAGGC CGCGCACGGC ACCCAGCAGG TGTCGTCGAA CATCACCGAC
GTGCAGCGCG GCGCCACCGA GACCGGCTCG GCCTCGTCGC AAGTGCTCTC CGCCGCACAG
TCACTGTCGC AGGACAGCAA CCGGCTGAAG GTTGAGGTCA CCAAATTCCT CGAAACCGTG
CGGGCGGCGT AA
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| Protein sequence | MFAKITIRTK ITALVAALLI ALSGLGALAV VEMRSLNAAS TDIATNWLPS VRILGEMRAY
LLGYRGALRD HILDLSAEGK DAADKRMATT QASLDKALKD YDKLVSSSEE RALYEDFAKG
WTDYKAAVGK ALEISRGSVG QFPASAWDYV KKNLVPIATR MDETLQKDID LNNKGAQTST
ETADTTYSFG FGLVVTILAL AFALGIAMSV LVIRDITLAI ASIISPMQEL GKGNLAADVP
HRGESTEIGR MADALQVFKE ALVAKRDADA AAAKEAEEKI ARAQRVDSAT RQFEHAIGEI
VDTVSSASTE LEASASTLTS TAERAQELAT SVAAASEEAS TNVQSVASAT EEMTSSITEI
SRQVQESARI ANDAVDQARR TNESVSDLSH AAARIGDVVE LINTIAGQTN LLALNATIEA
ARAGEAGRGF AVVAAEVKAL AEQTAKATGE ISQHITGIQT ATGQSVDAIK EIGQTIGRMS
EIASTIASAV EEQGAATQEI SRNVQQAAHG TQQVSSNITD VQRGATETGS ASSQVLSAAQ
SLSQDSNRLK VEVTKFLETV RAA
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