| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4406 |
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| Symbol | |
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| ID | 3970421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4911035 |
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| End bp | 4912735 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637927515 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_534248 |
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| Protein GI | 90425878 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.341232 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTGGC TCAATAATTT CAAGATCATC TACAAGATCA TCCTGATCGT CGGCCTGATG
GCGATAGTGA CGCTCGGGAT CGTCGGCTTT GCGGCCGGCC AGATGCAAGA GATGGATGAT
GCCAACACCG ATATGGTGAC CCGGATCGAC AAGTCGTCGA CGCTGGCGGT GCGCGCCGCC
AGGCGTGCCG AGAACTACGT CTCGACCGCG TTCCATCTGC TGGCGGAAAC CTCCGGCGCC
GGTAACGCCA GGTTGCTGGC GCAGGCCAAG GAGAGCCGGC AATCGTTCGA GAAGGGCATG
GCATCGGTGC TGCAAGCCAT GCCGGAGCAG GCCACGCTGA TCAAGCCGGT GATCGCCCAA
TTCCAGACCG CGTTCGCTGC GTGCGACCCG GTCATTGAAT TTGCCTCCAC CACGTCCTCG
ACCGAGGACA ATCTGATCGC CGCGACGCGC CTCAAGACGG AATGTGTCCC GGTGGTCGAG
GCCGGCATCA AGGCCCATAT CGCGATGGTC GATACCATGC TCGCCGATGC AGGCAAGGCG
TCCGATTTGA TGTCGGCGCG CGCCGCCAGC TCGATCCGTA CGGTGTGGGC GGCGGGAATT
GTCGGTCTGC TGTTAGCGTT CGCTATCGCG ATGTGGATCG GCAGCAAGGG ATTGGCGCAG
CCGATCGGCT CGCTCAAAAG CGTGATGGAA GTGTTCGCGC ACGGCGATTT CAAAGCCAGC
GTACCCAGCA TCGAGCGCCG CGACGAGATC GGCGAGATGG CCCGCACCGT CGAGGTGTTC
AAGACCAACG GCCTTGCGGT CGAACGAATG AAAGAAGAGC AGGCCACGGC CGAACGCACC
GCCATCACCC AGCGCAAGAC CGAGATGAGC AAATTGGCCG CCGATTTCGA AAGCGCGGTC
GGCGAGATCA TCCAGACCGT GTCGTCGGCG GCGACCGAGT TGGAAGCCTC CGCCGGCACC
TTGTCGGCGA CCTCGGAGCG CGCCGAGCAG CTCACCACGG TGGTTGCGGC GGCTTCGGAA
GAGGCCTCCA CCAATGTGCA GTCGGTGGCC TCGGCGACCG AGGAGATGAG CTCGTCGGTC
AACGAGATCA GCCGCCAGGT GCAGGAATCC TCGCGCATCG CCAGCGAGGC GGTGCAGCAG
GCGCAGAACA CCAACGACCG GGTCGGCGAA CTGGCCAAGG CGGCGGCGCG AATCGGCGCC
GTGGTCGAAC TGATCAACAC CATCGCCGGG CAGACCAACC TGTTGGCGCT GAACGCGACG
ATCGAAGCCG CGCGCGCCGG CGAGGCCGGT CGCGGCTTCG CGGTGGTGGC CTCCGAGGTG
AAAGCCCTCG CCGAGCAGAC CGCCAAGGCC ACCGGCGAGA TCGGTCAGCA AATCGCCGGG
ATTCAAGCTG CCACCCAGGA GTCGGTCGGC GCGATCAAGG AGATCGGCGA TACTATCGGC
AAGATGTCGG AGATCGCCGC CACCATTGCC TCCGCGGTGG AAGAGCAGGG GGCGGCCACG
CAGGAAATCT CCCGCAACGT GCAGCAGGCG GCGCTGGGCA CCCAGCAGGT CAGTTCCAAC
ATCACCGATG TGCAGCGCGG CGCCTCCGAG ACCGGCTCGG CCTCCTCGCA GGTGTTGTCG
GCGGCACAGA CGTTGTCGCG CGACAGCAGC CGGCTGAGGC AGGAAGTCAG CAAGTTCATG
GACACGGTGC GCGCCGCTTA A
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| Protein sequence | MSWLNNFKII YKIILIVGLM AIVTLGIVGF AAGQMQEMDD ANTDMVTRID KSSTLAVRAA
RRAENYVSTA FHLLAETSGA GNARLLAQAK ESRQSFEKGM ASVLQAMPEQ ATLIKPVIAQ
FQTAFAACDP VIEFASTTSS TEDNLIAATR LKTECVPVVE AGIKAHIAMV DTMLADAGKA
SDLMSARAAS SIRTVWAAGI VGLLLAFAIA MWIGSKGLAQ PIGSLKSVME VFAHGDFKAS
VPSIERRDEI GEMARTVEVF KTNGLAVERM KEEQATAERT AITQRKTEMS KLAADFESAV
GEIIQTVSSA ATELEASAGT LSATSERAEQ LTTVVAAASE EASTNVQSVA SATEEMSSSV
NEISRQVQES SRIASEAVQQ AQNTNDRVGE LAKAAARIGA VVELINTIAG QTNLLALNAT
IEAARAGEAG RGFAVVASEV KALAEQTAKA TGEIGQQIAG IQAATQESVG AIKEIGDTIG
KMSEIAATIA SAVEEQGAAT QEISRNVQQA ALGTQQVSSN ITDVQRGASE TGSASSQVLS
AAQTLSRDSS RLRQEVSKFM DTVRAA
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