Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1716 |
Symbol | |
ID | 3908241 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 1954679 |
End bp | 1956373 |
Gene Length | 1695 bp |
Protein Length | 564 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637883610 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_485335 |
Protein GI | 86748839 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0822312 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.62395 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGACGTG GGATCGCTAA TATCGGCCTT TCATGGAAGG TCCAGCTCGC TCCGGCACTG CTCGCGATTG CGCTGATAGG TATCGGGGTC TACGCGTTGC AGGCGTTGCG CACCAATCAG CAAAGCGTCG ACGCGCTGGT ATCGGGTCCC GTTCGGTCGT CGGAACTCGC CGCCGACCTC AACAACGCCG CGTGGACCGC CCACGCGAAG CTCTATCGGC TCGCCGCCAC CGCCGCCAAC GAGACCGACG AAGCCAAGCT CGCCCAGGTC TCCAAAGAGG CGATCGCGGC TATCGCCCGA ATTCCGCAAG CCCTGGCAGA CGTCGAAAAA TCGCTCGGCG GCGACTCGGC GATCCAAAAG CTGAAAGCGG CGGTCGCGGG CTACCAGAAG CAGGCGAAGA ACGCGATCGA GATGGCCGAC GGCGACGCCG GCTCGGCGCT GCTGTTCATC AAGAGCGCGG AGAAGAGCTT CACCGAAATC GATGCCCTCA TCAGCGACCT GATCGTGTCC AGCAACGACG CGCGTGACCG GCAGATCGCG CAGGCCGGAA TCGCGCTGGA TCGCCAGCAG TGGATGCTCG GCGCCGTCCT GGCGGTGATT TCGCTGATCG GCATCGCCGT GTCGTTCCTG ATCGGCAGAG GCATCGCTCG TCCGGTGGTG GCGATGTCGG GCGCAATGCA TGAACTGGCG AGCGGCAATT TCGACGTGCG ACTGCCCGGG CTGGAACGTG GCGACGAGGT CGGCCGGATG GCGCGGGCCG TCGAAGCCTT CAAGGTTCAG GCGGCCAGCA AGGCGGAGCG CGAACACGCC GAGCGCGAGG CGCTGGAACG CACGGCGGCG GCCGCCCGCC GCGCCGAACT GCATCAGCTC GCCGACGGTT TCGAGACCGC GGTCGGCCAG ATCATTGAAG CGGTCGGTGC CGCTTCGCGC GAGCTGGAGG AATCGGCCGA CGCCTTGGCC AAGGGCAGCG CCGTGACGCT GCAGCTCTCC AATGTCGTCG CGACGGCGTC CACGGAGACG TCCAACAACG TGCAGTCGGT GGCCTCGGCT GCCGAACAGA TGAACGCGTC GGTCGGAGAA GTCGGACGCC AGGTCCGCGA ATCGCGCAGC ATCGCCGCCG AAGCGGTGAC GCAGGCCGAG CAGACCGATG CGCGGATCGC CAAGCTGGCA CAGGCGGCCA CCCGGATCGG CGACGTCACC CAGCTCATCA CCACCATTGC GGCGCAGACC AATCTGCTGG CGCTCAACGC GACCATCGAG GCCGCGCGCG CGGGCGAGGC GGGCCGCGGC TTCGCCGTGG TCGCGCAGGA GGTCAAGGCA CTGGCCGAAC AGACCTCGAA GGCCACCGGC GAAATCAGCG CACAGATCGC CGAGATCCAG TCCGCGACGC GGGAGTCGGT GGTCGCGATC AAGGAGATCG GCGGCACCAT CGGGCGGGTC GCCCATATCG CTTCGGCCGT CGCCGCCTCG GTCGACGAGC AGGGCACTGC CACGCAGGAG ATTTCGCGCA GCGTCAGCCA GGCCGCGGTC GGAACCAACC AGGTCGCGTC CAGCATCGCC GACGTCAATC GCGGTGCTGC GGACGCCGGG GCGGCGTCGT CGCGCGTCCT CACGTCTGCG CAATTATTGT CCAACGAAAA CGGCCGATTG CGCGTCGAAG TGCAAAAATT TCTCGCAACC GTCCGGGTCG CTTAG
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Protein sequence | MGRGIANIGL SWKVQLAPAL LAIALIGIGV YALQALRTNQ QSVDALVSGP VRSSELAADL NNAAWTAHAK LYRLAATAAN ETDEAKLAQV SKEAIAAIAR IPQALADVEK SLGGDSAIQK LKAAVAGYQK QAKNAIEMAD GDAGSALLFI KSAEKSFTEI DALISDLIVS SNDARDRQIA QAGIALDRQQ WMLGAVLAVI SLIGIAVSFL IGRGIARPVV AMSGAMHELA SGNFDVRLPG LERGDEVGRM ARAVEAFKVQ AASKAEREHA EREALERTAA AARRAELHQL ADGFETAVGQ IIEAVGAASR ELEESADALA KGSAVTLQLS NVVATASTET SNNVQSVASA AEQMNASVGE VGRQVRESRS IAAEAVTQAE QTDARIAKLA QAATRIGDVT QLITTIAAQT NLLALNATIE AARAGEAGRG FAVVAQEVKA LAEQTSKATG EISAQIAEIQ SATRESVVAI KEIGGTIGRV AHIASAVAAS VDEQGTATQE ISRSVSQAAV GTNQVASSIA DVNRGAADAG AASSRVLTSA QLLSNENGRL RVEVQKFLAT VRVA
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