Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1867 |
Symbol | |
ID | 4022349 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 2088617 |
End bp | 2090761 |
Gene Length | 2145 bp |
Protein Length | 714 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637962060 |
Product | chemotaxis sensory transducer |
Protein accession | YP_569003 |
Protein GI | 91976344 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein [COG2202] FOG: PAS/PAC domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.133032 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCAACA ATTTGCCCGT TACAACCGTC GAATACTCGA TACCCGACGA TTGCTTCATT GTCAGCAAGA CCGACGCCAA GGGTCGGATC ACTTACTGCA ATGACGCATT TATCGAGGCC TCCGGCTTCG CCGAGGACGA ACTGATCGGC CAGCCGCACA ACATCGTTCG CCACCCGGAT ATGCCGCCGG AAGCCTACGA GGATCTCTGG GCAACGCTGA AGGCGGGCAA ACCCTGGTAC GGCGCAGTCA AGAACCGGCG CAAGAATGGT GACTATTACT GGGTGATGGC GAGTGCCTCT CCGATTTGGG AAGGCGGCAA GCTGAGCGGA TACATGTCGA TCCGTACCAG GATCACAAAC GACCTGCGCG CCGAAGCCGA ACAGGCTTAT GCTGAACTAC GCGCGAAGAA GTCCACCAAC TACACAGTTA CGGCCGGGAT CGTGCGGCGG CGGACTGTCT TCGACCGCCT GTCGCTGTTC ACCGGGACGA TGAAGGCGCG GCTGACCACG CTGGTCTCAG TCCAGGTCGC GCTGATGCTG CTGATCGGTC TGATCGGCAT GATCTCGTCA CATCAGGACA ACAACCGGAT CCAGTCGATC TACGAGAACA GCACAGCGCC TCTCGCTATG CTGCTCGATA CCAGCGACCG GATGAAAGAC AACATCGTCG CGCTTCACGA CGCCGTGGTC AACGGCCGAG CGGGCAAACC GGTGGCGGAT TTGATCACGA GGATCAACAC CAATATCGAC AATATCAGCA AGGCGGGTTC GAGCTATTCG CCGCGACCGG GCGAAGAAAA GACCATTGCC GATGCCTACG CCGCAAGACG CAATGAATTT CTCGATCGCG CCGTCAGGCC CGGACTGGCG CTGCTGGCAG AGCGCAAATA CGACGAGCTG ACGACTCTGC TGACCGGACC TGCCGAGGAG TTGTATGCGG CAGCACGTCA ACAGCTGCAG CGCCTTGCGT CGGCCCAGGT CAACGCCGCC AAGGCTGAAA CCAGCGAGGC GCATCGCCAA TACGCCATCG CACTGCCGTT GGTGATCGGC CTGCTCTGTG TCGGCGTCTT CTACGGTGGA TGGCTCGGCC TCCGGACTAT TCAGGCGACG TTGCGACCGC TCGGCCGCCT GAACGCCGCG ATGGATAAGA TCGCGCAAGG CGATTTCAAC AGCCGCATCC TGATCAAGCG CGACGACGAG ATCGGAACCG CGCTACGCAA CATCCAGGCG ATGCAGGCCA AGCTCGGCTT CGATCGCGAG GTTCAGTCCG AGACTGAAAG GCGGATCACG AACGCGCGGA AGCAGGAGAT GCGTAAGCTC GCTGAGGACT TCGAAAACGC AGTAGGCGAG ATCATTCAGA CCGTTTCGTC GGCATCGACC GAGTTGGAGA GCTCGGCTGG CACGCTGACG GAAACCGCCG ACCGTGCACT GGAACTCACC AGCATGGTCG CGACATCCTC CGAGGAAGCC TCGGGCAACG TCCAGTCTGT CGCGCTCGCC ACCGAGAAGA TGACCGCCTC AGTCAACGAG ATCAGCCGGC AGGTACAGGA TTCGGCGCGA ATCGCTGCCA GCGCCGTAGA CCAGGCTCGC CGAACCAACG AGCGGGTGAG CGACCTGTCG AACGCCGCGA ACCGCATCGG CGACGTCGTC GAACTGATCA ACAACATCGC CGGGCAGACA AACCTTCTGG CGCTGAATGC AACCATCGAG GCGGCCCGCG CCGGCGAAGC CGGCCGTGGT TTTGCGGTGG TGGCAAGCGA AGTGAAGGCA CTCGCCGAAC AGACCGCGAA GGCCACCGGC GAGATCGCCC AGCAGATCAC CGGGATGCAG ACCGCCACGC AAGAGTCGGT CGACGCGATC AAGGAGATCG GCGACACCAT CGGCCGGCTC TCGGAGATCT CGTCGATCAT CGCCTCCGCT GTCGAACAGC AAGACGCCGT GACGCAAGAG ATCACGCACA ACGTCCAGGA CGCGTCGAAC GGCACCCGGC AGGTCACCTC GCACATCGGC GACGTGAAGC GTGACGCCAG CGAAACCGGC GCGGCCTGCC AGCAGCTGTT CGCCGCTGCA CAGGCGTTGT CGCGCGACAG CAGCCGGTTA AGCTTGGAGG TCGACAGGTT CCTGTCGACG GTGCGCGCCG CCTGA
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Protein sequence | MRNNLPVTTV EYSIPDDCFI VSKTDAKGRI TYCNDAFIEA SGFAEDELIG QPHNIVRHPD MPPEAYEDLW ATLKAGKPWY GAVKNRRKNG DYYWVMASAS PIWEGGKLSG YMSIRTRITN DLRAEAEQAY AELRAKKSTN YTVTAGIVRR RTVFDRLSLF TGTMKARLTT LVSVQVALML LIGLIGMISS HQDNNRIQSI YENSTAPLAM LLDTSDRMKD NIVALHDAVV NGRAGKPVAD LITRINTNID NISKAGSSYS PRPGEEKTIA DAYAARRNEF LDRAVRPGLA LLAERKYDEL TTLLTGPAEE LYAAARQQLQ RLASAQVNAA KAETSEAHRQ YAIALPLVIG LLCVGVFYGG WLGLRTIQAT LRPLGRLNAA MDKIAQGDFN SRILIKRDDE IGTALRNIQA MQAKLGFDRE VQSETERRIT NARKQEMRKL AEDFENAVGE IIQTVSSAST ELESSAGTLT ETADRALELT SMVATSSEEA SGNVQSVALA TEKMTASVNE ISRQVQDSAR IAASAVDQAR RTNERVSDLS NAANRIGDVV ELINNIAGQT NLLALNATIE AARAGEAGRG FAVVASEVKA LAEQTAKATG EIAQQITGMQ TATQESVDAI KEIGDTIGRL SEISSIIASA VEQQDAVTQE ITHNVQDASN GTRQVTSHIG DVKRDASETG AACQQLFAAA QALSRDSSRL SLEVDRFLST VRAA
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