| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1867 |
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| Symbol | |
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| ID | 4022349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 2088617 |
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| End bp | 2090761 |
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| Gene Length | 2145 bp |
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| Protein Length | 714 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637962060 |
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| Product | chemotaxis sensory transducer |
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| Protein accession | YP_569003 |
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| Protein GI | 91976344 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein
[COG2202] FOG: PAS/PAC domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.133032 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAACA ATTTGCCCGT TACAACCGTC GAATACTCGA TACCCGACGA TTGCTTCATT
GTCAGCAAGA CCGACGCCAA GGGTCGGATC ACTTACTGCA ATGACGCATT TATCGAGGCC
TCCGGCTTCG CCGAGGACGA ACTGATCGGC CAGCCGCACA ACATCGTTCG CCACCCGGAT
ATGCCGCCGG AAGCCTACGA GGATCTCTGG GCAACGCTGA AGGCGGGCAA ACCCTGGTAC
GGCGCAGTCA AGAACCGGCG CAAGAATGGT GACTATTACT GGGTGATGGC GAGTGCCTCT
CCGATTTGGG AAGGCGGCAA GCTGAGCGGA TACATGTCGA TCCGTACCAG GATCACAAAC
GACCTGCGCG CCGAAGCCGA ACAGGCTTAT GCTGAACTAC GCGCGAAGAA GTCCACCAAC
TACACAGTTA CGGCCGGGAT CGTGCGGCGG CGGACTGTCT TCGACCGCCT GTCGCTGTTC
ACCGGGACGA TGAAGGCGCG GCTGACCACG CTGGTCTCAG TCCAGGTCGC GCTGATGCTG
CTGATCGGTC TGATCGGCAT GATCTCGTCA CATCAGGACA ACAACCGGAT CCAGTCGATC
TACGAGAACA GCACAGCGCC TCTCGCTATG CTGCTCGATA CCAGCGACCG GATGAAAGAC
AACATCGTCG CGCTTCACGA CGCCGTGGTC AACGGCCGAG CGGGCAAACC GGTGGCGGAT
TTGATCACGA GGATCAACAC CAATATCGAC AATATCAGCA AGGCGGGTTC GAGCTATTCG
CCGCGACCGG GCGAAGAAAA GACCATTGCC GATGCCTACG CCGCAAGACG CAATGAATTT
CTCGATCGCG CCGTCAGGCC CGGACTGGCG CTGCTGGCAG AGCGCAAATA CGACGAGCTG
ACGACTCTGC TGACCGGACC TGCCGAGGAG TTGTATGCGG CAGCACGTCA ACAGCTGCAG
CGCCTTGCGT CGGCCCAGGT CAACGCCGCC AAGGCTGAAA CCAGCGAGGC GCATCGCCAA
TACGCCATCG CACTGCCGTT GGTGATCGGC CTGCTCTGTG TCGGCGTCTT CTACGGTGGA
TGGCTCGGCC TCCGGACTAT TCAGGCGACG TTGCGACCGC TCGGCCGCCT GAACGCCGCG
ATGGATAAGA TCGCGCAAGG CGATTTCAAC AGCCGCATCC TGATCAAGCG CGACGACGAG
ATCGGAACCG CGCTACGCAA CATCCAGGCG ATGCAGGCCA AGCTCGGCTT CGATCGCGAG
GTTCAGTCCG AGACTGAAAG GCGGATCACG AACGCGCGGA AGCAGGAGAT GCGTAAGCTC
GCTGAGGACT TCGAAAACGC AGTAGGCGAG ATCATTCAGA CCGTTTCGTC GGCATCGACC
GAGTTGGAGA GCTCGGCTGG CACGCTGACG GAAACCGCCG ACCGTGCACT GGAACTCACC
AGCATGGTCG CGACATCCTC CGAGGAAGCC TCGGGCAACG TCCAGTCTGT CGCGCTCGCC
ACCGAGAAGA TGACCGCCTC AGTCAACGAG ATCAGCCGGC AGGTACAGGA TTCGGCGCGA
ATCGCTGCCA GCGCCGTAGA CCAGGCTCGC CGAACCAACG AGCGGGTGAG CGACCTGTCG
AACGCCGCGA ACCGCATCGG CGACGTCGTC GAACTGATCA ACAACATCGC CGGGCAGACA
AACCTTCTGG CGCTGAATGC AACCATCGAG GCGGCCCGCG CCGGCGAAGC CGGCCGTGGT
TTTGCGGTGG TGGCAAGCGA AGTGAAGGCA CTCGCCGAAC AGACCGCGAA GGCCACCGGC
GAGATCGCCC AGCAGATCAC CGGGATGCAG ACCGCCACGC AAGAGTCGGT CGACGCGATC
AAGGAGATCG GCGACACCAT CGGCCGGCTC TCGGAGATCT CGTCGATCAT CGCCTCCGCT
GTCGAACAGC AAGACGCCGT GACGCAAGAG ATCACGCACA ACGTCCAGGA CGCGTCGAAC
GGCACCCGGC AGGTCACCTC GCACATCGGC GACGTGAAGC GTGACGCCAG CGAAACCGGC
GCGGCCTGCC AGCAGCTGTT CGCCGCTGCA CAGGCGTTGT CGCGCGACAG CAGCCGGTTA
AGCTTGGAGG TCGACAGGTT CCTGTCGACG GTGCGCGCCG CCTGA
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| Protein sequence | MRNNLPVTTV EYSIPDDCFI VSKTDAKGRI TYCNDAFIEA SGFAEDELIG QPHNIVRHPD
MPPEAYEDLW ATLKAGKPWY GAVKNRRKNG DYYWVMASAS PIWEGGKLSG YMSIRTRITN
DLRAEAEQAY AELRAKKSTN YTVTAGIVRR RTVFDRLSLF TGTMKARLTT LVSVQVALML
LIGLIGMISS HQDNNRIQSI YENSTAPLAM LLDTSDRMKD NIVALHDAVV NGRAGKPVAD
LITRINTNID NISKAGSSYS PRPGEEKTIA DAYAARRNEF LDRAVRPGLA LLAERKYDEL
TTLLTGPAEE LYAAARQQLQ RLASAQVNAA KAETSEAHRQ YAIALPLVIG LLCVGVFYGG
WLGLRTIQAT LRPLGRLNAA MDKIAQGDFN SRILIKRDDE IGTALRNIQA MQAKLGFDRE
VQSETERRIT NARKQEMRKL AEDFENAVGE IIQTVSSAST ELESSAGTLT ETADRALELT
SMVATSSEEA SGNVQSVALA TEKMTASVNE ISRQVQDSAR IAASAVDQAR RTNERVSDLS
NAANRIGDVV ELINNIAGQT NLLALNATIE AARAGEAGRG FAVVASEVKA LAEQTAKATG
EIAQQITGMQ TATQESVDAI KEIGDTIGRL SEISSIIASA VEQQDAVTQE ITHNVQDASN
GTRQVTSHIG DVKRDASETG AACQQLFAAA QALSRDSSRL SLEVDRFLST VRAA
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