Gene BBta_2904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_2904 
Symbol 
ID5153749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3015273 
End bp3016979 
Gene Length1707 bp 
Protein Length568 aa 
Translation table11 
GC content66% 
IMG OID640557783 
Productputative methyl-accepting chemotaxis protein 
Protein accessionYP_001238937 
Protein GI148254352 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.481458 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.283558 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATTTC TTTCGCACTT TCGTGTACTG ACCAAAATCC TTGCCATCGT CATGCTGATG 
GCGGCCGTGG CGGTCACGAT CAGCTGGTTT GCCATCGCCG CGCTGGAGAC GCTGGCCCAG
GATGGGAGCA AGATGGCGGC AGCCGCCAAC CGTGCCCTGC ACGCGGCGCG GGCGAATCAG
AACGTCCTTG CGCTCAGCCG TGCCGAGTTC CGTGCCGCGT TGGATCCTCA TGCGGAGAAC
CGCGATGCAG CGTTGAAGGT GGTGCAGGAG CAGCGCAAGC TTTTTGCAGA GCACATGGCA
GAGGTCTCAA AGACCAATGA CGATCAGGCG CGGGCGATGA TTCCAGAGAT CCGCAGCGCT
TACGCCGAGT ATGAGAAGGA GGCGGACGAG ACGTTTCGGG TGATCGGCAC TGCCAAGGAT
ATGCAGATCA GCGAGCAAAC CGTCCGGATG CGTGACGCTG CGATGAAGAG CCGGGGGGCG
GCCGAGAAGC TCCAGGCCAA GGTCAAGGAC GTGGCCGACC GGCTGAACGT CCGCGTCGAA
AATCTGGCTG GGGAGGCGGA AGTACAATAC GAGCAGACCT CCCGCACGCT GATGATCATC
GCTGGCGTCG GCACCGTACT CGGCCTGTCG CTCGGCTTTG TGATCGGGCA GTTCGGCATT
GCCAAGCCGA TGCGGGCGCT GGTCGCAGTG CTGCAGCGGA TGGCCAAGGG CGAGGACGTC
GCGATCTCGG GCGAAGGTCG CGGTGACGAG ATCGGCGAGA CCGCCCAGGC CGTCAACGAG
ATCAAGATCA TGCTGGCCGA GAAGGCCCGC CAGGAGGCGG AGGCCAAGGT CGCCATGGAC
AAGATGATGG CGGAGAAGCG CCGTGCCGAC ATGCACCAGA TGGCCGACAA TTTCGAGCAG
GCCGTGGGGC AGATCGTCGA GACCGTGTCC CATGCCTCGA CCGAGCTCGA AGCCTCGGCC
ACCTCGTTGA GCTCGACGGC CGCGCGCTCG CAGACGCTGG CCACCACCGT GGCGTCCGCC
TCGCACGAGG CCTCGACCAA TGTGCAGTCG GTGGCGTCGG CGACTGAGGA AATGTCGTCC
TCGGTCAACG AGATCAGCCG CCAGGTGCAG GAATCCGCCC GCATGGCCAG CGATGCCGTC
GACCAGGCGC GCCGGACCAA TGAGCGTGTC GGCGAGTTGT CCAAGGCCGC GACCCGGATC
GGCGACGTCG TCGAACTGAT CAACACCATT GCGGGCCAGA CCAATTTGCT GGCGCTCAAC
GCCACCATCG AGGCGGCGCG CGCCGGTGAG GCCGGCCGCG GCTTTGCGGT GGTCGCCTCC
GAGGTCAAGG CGCTGGCCGA GCAGACCGCC AAGGCCACCG GCGAGATCGG CCAGCAGATC
AGCAGCATCC AGGCCGCGAC GCAGGAGTCG GTGGGCGCGA TCCGCGAGAT TTCCGGCACG
ATCGAGAAGC TGTCGGAAAT CTCCTCGACC ATCGCCGCCG CGGTGGAGGA GCAGGGCGCC
GCGACCCAGG AGATCTCGCG CAACATCCAG CAGGCGGCGA TCGGCACGCA GCAGGTCTCG
GCCAATATCT CCGAGGTGCA ACGTGGCGCC GGCGAGACCG GATCGGCCTC GTCCCAGGTG
CTGTCGGCAG CGCAGATGCT GTCCGGTGAC AGCAACCGGC TGAAGGTCGA GGTCGACCGC
TTCCTGAGCA CGGTCCGCGC CGCCTGA
 
Protein sequence
MSFLSHFRVL TKILAIVMLM AAVAVTISWF AIAALETLAQ DGSKMAAAAN RALHAARANQ 
NVLALSRAEF RAALDPHAEN RDAALKVVQE QRKLFAEHMA EVSKTNDDQA RAMIPEIRSA
YAEYEKEADE TFRVIGTAKD MQISEQTVRM RDAAMKSRGA AEKLQAKVKD VADRLNVRVE
NLAGEAEVQY EQTSRTLMII AGVGTVLGLS LGFVIGQFGI AKPMRALVAV LQRMAKGEDV
AISGEGRGDE IGETAQAVNE IKIMLAEKAR QEAEAKVAMD KMMAEKRRAD MHQMADNFEQ
AVGQIVETVS HASTELEASA TSLSSTAARS QTLATTVASA SHEASTNVQS VASATEEMSS
SVNEISRQVQ ESARMASDAV DQARRTNERV GELSKAATRI GDVVELINTI AGQTNLLALN
ATIEAARAGE AGRGFAVVAS EVKALAEQTA KATGEIGQQI SSIQAATQES VGAIREISGT
IEKLSEISST IAAAVEEQGA ATQEISRNIQ QAAIGTQQVS ANISEVQRGA GETGSASSQV
LSAAQMLSGD SNRLKVEVDR FLSTVRAA